RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 FAM3BP58499 235 aaPredicted RBP10.74□□□□□ -0.69
NUP50-213ENST00000461437 ANXA2RQ3ZCQ2 193 aa10.74□□□□□ -0.69
NUP50-213ENST00000461437 KHDC3LQ587J8 217 aa10.74□□□□□ -0.69
NUP50-213ENST00000461437 SOHLH1Q5JUK2 328 aa10.74□□□□□ -0.69
NUP50-213ENST00000461437 LINC00467Q9BRT7 94 aa10.74□□□□□ -0.69
NUP50-213ENST00000461437 LRP1BQ9NZR2 4599 aa10.73□□□□□ -0.69
NUP50-213ENST00000461437 DIRC3C9JPN6 131 aa10.73□□□□□ -0.69
NUP50-213ENST00000461437 SPINK4O60575 86 aa10.73□□□□□ -0.69
NUP50-213ENST00000461437 C6orf223Q8N319 242 aa10.73□□□□□ -0.69
NUP50-213ENST00000461437 ARPC5LQ9BPX5 153 aa10.73□□□□□ -0.69
NUP50-213ENST00000461437 A0A096LPF7 62 aa10.72□□□□□ -0.69
NUP50-213ENST00000461437 CSN1S1P47710 185 aa10.72□□□□□ -0.69
NUP50-213ENST00000461437 GNG5P63218 68 aa10.72□□□□□ -0.69
NUP50-213ENST00000461437 Q5BKY6 102 aa10.72□□□□□ -0.69
NUP50-213ENST00000461437 Q9H8V8 135 aa10.72□□□□□ -0.69
NUP50-213ENST00000461437 MDFICQ9P1T7 246 aa10.72□□□□□ -0.69
NUP50-213ENST00000461437 TRAV8-1A0A0A6YYK1 113 aa10.71□□□□□ -0.69
NUP50-213ENST00000461437 PGPA6NDG6 321 aa10.71□□□□□ -0.69
NUP50-213ENST00000461437 NMBP08949 121 aa10.71□□□□□ -0.69
NUP50-213ENST00000461437 TAS2R45P59539 299 aa10.71□□□□□ -0.69
NUP50-213ENST00000461437 ACOT6Q3I5F7 207 aaPredicted RBP10.71□□□□□ -0.69
NUP50-213ENST00000461437 HSD17B11Q8NBQ5 300 aa10.71□□□□□ -0.69
NUP50-213ENST00000461437 SGK494Q96LW2 274 aa10.71□□□□□ -0.69
NUP50-213ENST00000461437 NAGKQ9UJ70 344 aa10.71□□□□□ -0.69
NUP50-213ENST00000461437 DNAH5Q8TE73 4624 aa10.7□□□□□ -0.7
NUP50-213ENST00000461437 HSPG2P98160 4391 aa10.7□□□□□ -0.7
NUP50-213ENST00000461437 F6UZH7 168 aa10.7□□□□□ -0.7
NUP50-213ENST00000461437 ZNF266Q14584 549 aa10.7□□□□□ -0.7
NUP50-213ENST00000461437 IBA57Q5T440 356 aaKnown RBP10.7□□□□□ -0.7
NUP50-213ENST00000461437 GOLT1AQ6ZVE7 132 aa10.7□□□□□ -0.7
NUP50-213ENST00000461437 LYPD1Q8N2G4 141 aa10.7□□□□□ -0.7
NUP50-213ENST00000461437 A0A1W2PPV4 95 aa10.69□□□□□ -0.7
NUP50-213ENST00000461437 RBAKDNA6NC62 111 aa10.69□□□□□ -0.7
NUP50-213ENST00000461437 SFTA3P0C7M3 94 aa10.69□□□□□ -0.7
NUP50-213ENST00000461437 ZNF415Q09FC8 603 aa10.69□□□□□ -0.7
NUP50-213ENST00000461437 TMEM183BQ1AE95 376 aa10.69□□□□□ -0.7
NUP50-213ENST00000461437 TMEM183AQ8IXX5 376 aa10.69□□□□□ -0.7
NUP50-213ENST00000461437 OR10G4Q8NGN3 311 aa10.69□□□□□ -0.7
NUP50-213ENST00000461437 OR10G9Q8NGN4 311 aa10.69□□□□□ -0.7
NUP50-213ENST00000461437 OR10G7Q8NGN6 311 aa10.69□□□□□ -0.7
NUP50-213ENST00000461437 TVP23CQ96ET8 276 aa10.69□□□□□ -0.7
NUP50-213ENST00000461437 ST6GAL2Q96JF0 529 aa10.69□□□□□ -0.7
NUP50-213ENST00000461437 C8orf49Q96NF6 230 aa10.69□□□□□ -0.7
NUP50-213ENST00000461437 OTORQ9NRC9 128 aa10.69□□□□□ -0.7
NUP50-213ENST00000461437 ARL14EPLP0DKL9 152 aa10.68□□□□□ -0.7
NUP50-213ENST00000461437 MED14OSP0DP75 135 aa10.68□□□□□ -0.7
NUP50-213ENST00000461437 CMTM2Q8TAZ6 248 aa10.68□□□□□ -0.7
NUP50-213ENST00000461437 C18orf15Q96N68 181 aa10.68□□□□□ -0.7
NUP50-213ENST00000461437 MED28Q9H204 178 aa10.68□□□□□ -0.7
NUP50-213ENST00000461437 SH3BGRL3Q9H299 93 aa10.68□□□□□ -0.7
NUP50-213ENST00000461437 MRPS16Q9Y3D3 137 aaKnown RBP10.68□□□□□ -0.7
NUP50-213ENST00000461437 ABCA13Q86UQ4 5058 aa10.68□□□□□ -0.7
NUP50-213ENST00000461437 H3BNG1 76 aa10.67□□□□□ -0.7
NUP50-213ENST00000461437 PAX4O43316 350 aa10.67□□□□□ -0.7
NUP50-213ENST00000461437 GNRH2O43555 120 aa10.67□□□□□ -0.7
NUP50-213ENST00000461437 PTTG1O95997 202 aa10.67□□□□□ -0.7
NUP50-213ENST00000461437 ATP6V0CP27449 155 aa10.67□□□□□ -0.7
NUP50-213ENST00000461437 CDC34P49427 236 aaPredicted RBP10.67□□□□□ -0.7
NUP50-213ENST00000461437 FHL2Q14192 279 aa10.67□□□□□ -0.7
NUP50-213ENST00000461437 Q6AWC8 147 aa10.67□□□□□ -0.7
NUP50-213ENST00000461437 ZNF479Q96JC4 524 aa10.67□□□□□ -0.7
NUP50-213ENST00000461437 UPK3BQ9BT76 320 aa10.67□□□□□ -0.7
NUP50-213ENST00000461437 TRBV7-9A0A0J9YWB2 115 aa10.66□□□□□ -0.7
NUP50-213ENST00000461437 PQLC2Q6ZP29 291 aa10.66□□□□□ -0.7
NUP50-213ENST00000461437 APOBP04114 4563 aaKnown RBP10.66□□□□□ -0.7
NUP50-213ENST00000461437 CRYBA4P53673 196 aa10.65□□□□□ -0.7
NUP50-213ENST00000461437 FAM159AQ6UWV7 190 aa10.65□□□□□ -0.7
NUP50-213ENST00000461437 RAB24Q969Q5 203 aa10.65□□□□□ -0.7
NUP50-213ENST00000461437 AQP10Q96PS8 301 aa10.65□□□□□ -0.7
NUP50-213ENST00000461437 ICOSQ9Y6W8 199 aa10.65□□□□□ -0.7
NUP50-213ENST00000461437 C16orf90A8MZG2 172 aa10.64□□□□□ -0.71
NUP50-213ENST00000461437 STAG3L2P0CL84 134 aa10.64□□□□□ -0.71
NUP50-213ENST00000461437 STAG3L3P0CL85 134 aa10.64□□□□□ -0.71
NUP50-213ENST00000461437 FAM74A1Q5RGS3 127 aa10.64□□□□□ -0.71
NUP50-213ENST00000461437 TREM1Q9NP99 234 aa10.64□□□□□ -0.71
NUP50-213ENST00000461437 PRO0255Q9UI72 69 aa10.64□□□□□ -0.71
NUP50-213ENST00000461437 HHLA3Q9XRX5 114 aa10.64□□□□□ -0.71
NUP50-213ENST00000461437 TRGV11A0A075B6L2 103 aa10.63□□□□□ -0.71
NUP50-213ENST00000461437 TRGV4A0A0C4DH28 118 aa10.63□□□□□ -0.71
NUP50-213ENST00000461437 NXPH4O95158 308 aa10.63□□□□□ -0.71
NUP50-213ENST00000461437 TYMSP04818 313 aa10.63□□□□□ -0.71
NUP50-213ENST00000461437 GCHFRP30047 84 aa10.63□□□□□ -0.71
NUP50-213ENST00000461437 ZNF80P51504 273 aaPredicted RBP10.63□□□□□ -0.71
NUP50-213ENST00000461437 RPL7L1Q6DKI1 246 aaKnown RBP10.63□□□□□ -0.71
NUP50-213ENST00000461437 OR2G3Q8NGZ4 309 aa10.63□□□□□ -0.71
NUP50-213ENST00000461437 LENEPQ9Y5L5 61 aa10.63□□□□□ -0.71
NUP50-213ENST00000461437 TNFRSF18Q9Y5U5 241 aa10.63□□□□□ -0.71
NUP50-213ENST00000461437 FXYD6-FXYD2A0A087WZ82 144 aa10.62□□□□□ -0.71
NUP50-213ENST00000461437 IGHV3-16A0A0C4DH30 117 aa10.62□□□□□ -0.71
NUP50-213ENST00000461437 LOC100131303A0A0U1RQF7 123 aa10.62□□□□□ -0.71
NUP50-213ENST00000461437 RNF222A6NCQ9 220 aa10.62□□□□□ -0.71
NUP50-213ENST00000461437 FUSP35637 526 aaKnown RBP eCLIP10.62□□□□□ -0.71
NUP50-213ENST00000461437 LINC00315P59091 139 aa10.62□□□□□ -0.71
NUP50-213ENST00000461437 TTC32Q5I0X7 151 aa10.62□□□□□ -0.71
NUP50-213ENST00000461437 SPATA12Q7Z6I5 190 aa10.62□□□□□ -0.71
NUP50-213ENST00000461437 TMEM75Q8N9X5 138 aa10.62□□□□□ -0.71
NUP50-213ENST00000461437 TMED6Q8WW62 240 aa10.62□□□□□ -0.71
NUP50-213ENST00000461437 KRTAP4-5Q9BYR2 181 aa10.62□□□□□ -0.71
NUP50-213ENST00000461437 GGTLC3B5MD39 225 aa10.61□□□□□ -0.71
NUP50-213ENST00000461437 GIPP09681 153 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms