RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 Q6AWC8 147 aa12.59□□□□□ -0.39
PLOD3-209ENST00000460475 LGALS9CQ6DKI2 356 aa12.59□□□□□ -0.39
PLOD3-209ENST00000460475 EIF4E3Q8N5X7 224 aaKnown RBP12.59□□□□□ -0.39
PLOD3-209ENST00000460475 LINC00612Q8N6U2 182 aa12.59□□□□□ -0.39
PLOD3-209ENST00000460475 STOML3Q8TAV4 291 aa12.59□□□□□ -0.39
PLOD3-209ENST00000460475 TMPRSS5Q9H3S3 457 aa12.59□□□□□ -0.39
PLOD3-209ENST00000460475 EPDR1Q9UM22 224 aa12.59□□□□□ -0.39
PLOD3-209ENST00000460475 MAP1LC3B2A6NCE7 125 aa12.58□□□□□ -0.4
PLOD3-209ENST00000460475 PFDN1O60925 122 aa12.58□□□□□ -0.4
PLOD3-209ENST00000460475 FHITP49789 147 aa12.58□□□□□ -0.4
PLOD3-209ENST00000460475 DAZ2Q13117 558 aaKnown RBP12.58□□□□□ -0.4
PLOD3-209ENST00000460475 C11orf72Q8NBR9 251 aa12.58□□□□□ -0.4
PLOD3-209ENST00000460475 ZNF680Q8NEM1 530 aa12.58□□□□□ -0.4
PLOD3-209ENST00000460475 MAP1LC3BQ9GZQ8 125 aa12.58□□□□□ -0.4
PLOD3-209ENST00000460475 NOP10Q9NPE3 64 aaKnown RBP12.58□□□□□ -0.4
PLOD3-209ENST00000460475 RPH3ALQ9UNE2 315 aa12.58□□□□□ -0.4
PLOD3-209ENST00000460475 DNAH6Q9C0G6 4158 aa12.57□□□□□ -0.4
PLOD3-209ENST00000460475 TRAV8-1A0A0A6YYK1 113 aa12.57□□□□□ -0.4
PLOD3-209ENST00000460475 CBY3A6NI87 242 aa12.57□□□□□ -0.4
PLOD3-209ENST00000460475 DEFB130BP0DP73 79 aa12.57□□□□□ -0.4
PLOD3-209ENST00000460475 DEFB130AP0DP74 79 aa12.57□□□□□ -0.4
PLOD3-209ENST00000460475 TPT1P13693 172 aaKnown RBP12.57□□□□□ -0.4
PLOD3-209ENST00000460475 FGF8P55075 233 aaPredicted RBP12.57□□□□□ -0.4
PLOD3-209ENST00000460475 Q6ZQT7 251 aa12.57□□□□□ -0.4
PLOD3-209ENST00000460475 IQCF2Q8IXL9 164 aa12.57□□□□□ -0.4
PLOD3-209ENST00000460475 MBD3L1Q8WWY6 194 aa12.57□□□□□ -0.4
PLOD3-209ENST00000460475 TVP23CQ96ET8 276 aa12.57□□□□□ -0.4
PLOD3-209ENST00000460475 NKX6-2Q9C056 277 aaPredicted RBP12.57□□□□□ -0.4
PLOD3-209ENST00000460475 IGHV1OR15-1A0A075B7D0 117 aa12.56□□□□□ -0.4
PLOD3-209ENST00000460475 SNURFLB1AK76 121 aa12.56□□□□□ -0.4
PLOD3-209ENST00000460475 LY6G6CO95867 125 aa12.56□□□□□ -0.4
PLOD3-209ENST00000460475 DPPA3Q6W0C5 159 aa12.56□□□□□ -0.4
PLOD3-209ENST00000460475 AKAP14Q86UN6 197 aa12.56□□□□□ -0.4
PLOD3-209ENST00000460475 MUC4Q99102 2169 aa12.55□□□□□ -0.4
PLOD3-209ENST00000460475 FBLL1A6NHQ2 334 aaKnown RBP12.55□□□□□ -0.4
PLOD3-209ENST00000460475 FAM74A7A6NL05 159 aa12.55□□□□□ -0.4
PLOD3-209ENST00000460475 K7EQM0 130 aa12.55□□□□□ -0.4
PLOD3-209ENST00000460475 RGS13O14921 159 aa12.55□□□□□ -0.4
PLOD3-209ENST00000460475 IGLV2-11P01706 119 aa12.55□□□□□ -0.4
PLOD3-209ENST00000460475 IBA57Q5T440 356 aaKnown RBP12.55□□□□□ -0.4
PLOD3-209ENST00000460475 CYB561D1Q8N8Q1 229 aa12.55□□□□□ -0.4
PLOD3-209ENST00000460475 ATG101Q9BSB4 218 aa12.55□□□□□ -0.4
PLOD3-209ENST00000460475 NDUFAF3Q9BU61 184 aa12.55□□□□□ -0.4
PLOD3-209ENST00000460475 hCG_2014768A0A024R1R8 64 aa12.54□□□□□ -0.4
PLOD3-209ENST00000460475 TMEM75Q8N9X5 138 aa12.54□□□□□ -0.4
PLOD3-209ENST00000460475 TREM1Q9NP99 234 aa12.54□□□□□ -0.4
PLOD3-209ENST00000460475 GSN-AS1Q9NRJ2 163 aa12.54□□□□□ -0.4
PLOD3-209ENST00000460475 ARL2-SNX15V9GYD0 113 aa12.54□□□□□ -0.4
PLOD3-209ENST00000460475 ATP5G1P05496 136 aa12.53□□□□□ -0.4
PLOD3-209ENST00000460475 HTN3P15516 51 aa12.53□□□□□ -0.4
PLOD3-209ENST00000460475 ATP5G3P48201 142 aa12.53□□□□□ -0.4
PLOD3-209ENST00000460475 TCL1AP56279 114 aa12.53□□□□□ -0.4
PLOD3-209ENST00000460475 UBE2G2P60604 165 aa12.53□□□□□ -0.4
PLOD3-209ENST00000460475 TDRG1Q3Y452 100 aa12.53□□□□□ -0.4
PLOD3-209ENST00000460475 FAM213BQ8TBF2 198 aa12.53□□□□□ -0.4
PLOD3-209ENST00000460475 TP53TG3Q9ULZ0 132 aa12.53□□□□□ -0.4
PLOD3-209ENST00000460475 PSG8Q9UQ74 426 aa12.53□□□□□ -0.4
PLOD3-209ENST00000460475 FLI1Q01543 452 aaPredicted RBP12.52□□□□□ -0.41
PLOD3-209ENST00000460475 EIF5AL1Q6IS14 154 aaKnown RBP12.52□□□□□ -0.41
PLOD3-209ENST00000460475 SFT2D1Q8WV19 159 aa12.52□□□□□ -0.41
PLOD3-209ENST00000460475 HIST1H2BAQ96A08 127 aa12.52□□□□□ -0.41
PLOD3-209ENST00000460475 SGK494Q96LW2 274 aa12.52□□□□□ -0.41
PLOD3-209ENST00000460475 C18orf15Q96N68 181 aa12.52□□□□□ -0.41
PLOD3-209ENST00000460475 NDFIP1Q9BT67 221 aa12.52□□□□□ -0.41
PLOD3-209ENST00000460475 TRAV21A0A0B4J279 112 aa12.51□□□□□ -0.41
PLOD3-209ENST00000460475 SPINK4O60575 86 aa12.51□□□□□ -0.41
PLOD3-209ENST00000460475 IFNA7P01567 189 aa12.51□□□□□ -0.41
PLOD3-209ENST00000460475 SLC51BQ86UW2 128 aa12.51□□□□□ -0.41
PLOD3-209ENST00000460475 TCEAL7Q9BRU2 100 aa12.51□□□□□ -0.41
PLOD3-209ENST00000460475 KLF12Q9Y4X4 402 aa12.51□□□□□ -0.41
PLOD3-209ENST00000460475 GAGE12BA1L429 117 aa12.5□□□□□ -0.41
PLOD3-209ENST00000460475 PEX7O00628 323 aa12.5□□□□□ -0.41
PLOD3-209ENST00000460475 GAGE7O76087 117 aa12.5□□□□□ -0.41
PLOD3-209ENST00000460475 H2AFB1P0C5Y9 115 aa12.5□□□□□ -0.41
PLOD3-209ENST00000460475 GAGE12FP0CL80 117 aa12.5□□□□□ -0.41
PLOD3-209ENST00000460475 GAGE12GP0CL81 117 aa12.5□□□□□ -0.41
PLOD3-209ENST00000460475 GAGE12IP0CL82 117 aa12.5□□□□□ -0.41
PLOD3-209ENST00000460475 RAB5CP51148 216 aa12.5□□□□□ -0.41
PLOD3-209ENST00000460475 MUC21Q5SSG8 566 aa12.5□□□□□ -0.41
PLOD3-209ENST00000460475 SAPCD1Q5SSQ6 148 aa12.5□□□□□ -0.41
PLOD3-209ENST00000460475 TMEM88Q6PEY1 159 aa12.5□□□□□ -0.41
PLOD3-209ENST00000460475 FAM159AQ6UWV7 190 aa12.5□□□□□ -0.41
PLOD3-209ENST00000460475 Q6ZTI0 123 aa12.5□□□□□ -0.41
PLOD3-209ENST00000460475 LINC00479Q96M42 142 aa12.5□□□□□ -0.41
PLOD3-209ENST00000460475 TRAV1-1A0A0B4J248 108 aa12.49□□□□□ -0.41
PLOD3-209ENST00000460475 F5H768 121 aa12.49□□□□□ -0.41
PLOD3-209ENST00000460475 F6UZH7 168 aa12.49□□□□□ -0.41
PLOD3-209ENST00000460475 LGALS9BQ3B8N2 356 aa12.49□□□□□ -0.41
PLOD3-209ENST00000460475 PRNTQ86SH4 94 aa12.49□□□□□ -0.41
PLOD3-209ENST00000460475 C9orf62Q8N4C0 152 aa12.49□□□□□ -0.41
PLOD3-209ENST00000460475 A0A1B0GVG6 124 aa12.48□□□□□ -0.41
PLOD3-209ENST00000460475 PPT1P50897 306 aa12.48□□□□□ -0.41
PLOD3-209ENST00000460475 ZNF80P51504 273 aaPredicted RBP12.48□□□□□ -0.41
PLOD3-209ENST00000460475 ZNF415Q09FC8 603 aa12.48□□□□□ -0.41
PLOD3-209ENST00000460475 C15orf53Q8NAA6 179 aa12.48□□□□□ -0.41
PLOD3-209ENST00000460475 C8orf49Q96NF6 230 aa12.48□□□□□ -0.41
PLOD3-209ENST00000460475 MDFICQ9P1T7 246 aa12.48□□□□□ -0.41
PLOD3-209ENST00000460475 TRGV11A0A075B6L2 103 aa12.47□□□□□ -0.41
PLOD3-209ENST00000460475 TRAV34A0A0B4J273 112 aa12.47□□□□□ -0.41
PLOD3-209ENST00000460475 PAGE4O60829 102 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms