RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 EFCAB11Q9BUY7 163 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 MAP1LC3AQ9H492 121 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 BABAM2Q9NXR7 383 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 FBXO5Q9UKT4 447 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 HHLA3Q9XRX5 114 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 SLC22A13Q9Y226 551 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 POLR1DQ9Y2S0 133 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 NEBP20929 6669 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 FAT3Q8TDW7 4589 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 TMSB15BA0A087X1C1 80 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 TRAV41A0A0B4J266 112 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 A0A1B0GV90 55 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 ARPC5O15511 151 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 SSNA1O43805 119 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 NOS1APO75052 506 aaPredicted RBP1.12□□□□□ -2.23
RFC4-211ENST00000460408 SMIM24O75264 130 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 KRT75O95678 551 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 PPBPP02775 128 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 CCL1P22362 96 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 CEBPGP53567 150 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 RANP62826 216 aaKnown RBP1.12□□□□□ -2.23
RFC4-211ENST00000460408 TNFAIP6P98066 277 aaPredicted RBP1.12□□□□□ -2.23
RFC4-211ENST00000460408 GUK1Q16774 197 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 SPRNQ5BIV9 151 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 RAB2BQ8WUD1 216 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 RNF133Q8WVZ7 376 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 C1orf54Q8WWF1 131 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 AP3S1Q92572 193 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 GNPNAT1Q96EK6 184 aaPredicted RBP1.12□□□□□ -2.23
RFC4-211ENST00000460408 NIPSNAP1Q9BPW8 284 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 HRASLSQ9HDD0 168 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 BATF3Q9NR55 127 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 GID8Q9NWU2 228 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 APLNQ9ULZ1 77 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 NDUFAF1Q9Y375 327 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 RBM7Q9Y580 266 aaKnown RBP1.12□□□□□ -2.23
RFC4-211ENST00000460408 TMEM56-RWDD3S4R434 201 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 TNXBP22105 4242 aa1.12□□□□□ -2.23
RFC4-211ENST00000460408 SYNE2Q8WXH0 6885 aaKnown RBP1.12□□□□□ -2.23
RFC4-211ENST00000460408 IGHV3-64A0A075B6Q5 118 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.11□□□□□ -2.23
RFC4-211ENST00000460408 RFPL4AA6NLU0 287 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 RFPL4AL1F8VTS6 287 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 F8W036 122 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 M0QZK8 103 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 CXCR6O00574 342 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 COX7A2LO14548 114 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 BANF1O75531 89 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 APOC1P02654 83 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 CD79AP11912 226 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 RPL12P30050 165 aaKnown RBP1.11□□□□□ -2.23
RFC4-211ENST00000460408 CRYBA4P53673 196 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 BLCAPP62952 87 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 MRPS25P82663 173 aaKnown RBP1.11□□□□□ -2.23
RFC4-211ENST00000460408 ERHP84090 104 aaKnown RBP1.11□□□□□ -2.23
RFC4-211ENST00000460408 MIAQ16674 131 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 DEFB136Q30KP8 78 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 FAM78BQ5VT40 261 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 HACD4Q5VWC8 232 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 RASSF6Q6ZTQ3 369 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 AAED1Q7RTV5 226 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 SMIM15Q7Z3B0 74 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 COMMD6Q7Z4G1 85 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 SLC35E3Q7Z769 313 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 OR1L8Q8NGR8 309 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 OR13C8Q8NGS7 320 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 OR2T27Q8NH04 317 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 C4orf3Q8WVX3 66 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 BORCS5Q969J3 196 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 TMEM106AQ96A25 262 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 PTH2Q96A98 100 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 C12orf43Q96C57 262 aaKnown RBP1.11□□□□□ -2.23
RFC4-211ENST00000460408 SERPINI1Q99574 410 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 C2orf88Q9BSF0 95 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 COA4Q9NYJ1 87 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 OPTCQ9UBM4 332 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 ANAPC10Q9UM13 185 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 RNF11Q9Y3C5 154 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 NUBP2Q9Y5Y2 271 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 V9GYQ6 96 aa1.11□□□□□ -2.23
RFC4-211ENST00000460408 SSPOA2VEC9 5147 aa1.1□□□□□ -2.23
RFC4-211ENST00000460408 TANC2Q9HCD6 1990 aa1.1□□□□□ -2.23
RFC4-211ENST00000460408 TRAV10A0A0B4J240 114 aa1.1□□□□□ -2.23
RFC4-211ENST00000460408 A0A1B0GW54 56 aa1.1□□□□□ -2.23
RFC4-211ENST00000460408 A8MUN3 132 aa1.1□□□□□ -2.23
RFC4-211ENST00000460408 UBL3O95164 117 aa1.1□□□□□ -2.23
RFC4-211ENST00000460408 SERPINA1P01009 418 aa1.1□□□□□ -2.23
RFC4-211ENST00000460408 HTR1AP08908 422 aa1.1□□□□□ -2.23
RFC4-211ENST00000460408 FKBP2P26885 142 aaKnown RBP1.1□□□□□ -2.23
RFC4-211ENST00000460408 SRP9P49458 86 aaKnown RBP1.1□□□□□ -2.23
RFC4-211ENST00000460408 FXYD7P58549 80 aa1.1□□□□□ -2.23
RFC4-211ENST00000460408 TAS2R20P59543 309 aa1.1□□□□□ -2.23
RFC4-211ENST00000460408 MAGOHP61326 146 aaKnown RBP1.1□□□□□ -2.23
RFC4-211ENST00000460408 H3F3AP84243 136 aa1.1□□□□□ -2.23
RFC4-211ENST00000460408 PRB3Q04118 309 aaPredicted RBP1.1□□□□□ -2.23
RFC4-211ENST00000460408 AESQ08117 197 aa1.1□□□□□ -2.23
RFC4-211ENST00000460408 KLRD1Q13241 179 aa1.1□□□□□ -2.23
RFC4-211ENST00000460408 SMCO1Q147U7 214 aa1.1□□□□□ -2.23
RFC4-211ENST00000460408 SPANXN3Q5MJ09 141 aa1.1□□□□□ -2.23
RFC4-211ENST00000460408 DHRS4L2Q6PKH6 230 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms