RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 IGF1P05019 195 aa7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 GPX1P07203 203 aa7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 PMCHL1Q16048 86 aa7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 FAM162BQ5T6X4 162 aa7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 RBPMS2Q6ZRY4 209 aaKnown RBP7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 GTSF1Q8WW33 167 aa7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 PRR25Q96S07 402 aa7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 DAZ1Q9NQZ3 744 aaKnown RBP7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 CLPSL1A2RUU4 121 aa7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 RNASE4P34096 147 aaKnown RBP7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 PDE6HQ13956 83 aa7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 PSMG4Q5JS54 123 aa7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 NIPBLQ6KC79 2804 aaeCLIP7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 DEFB104AQ8WTQ1 72 aa7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 AGPAT4-IT1Q9H0P7 198 aa7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 A0A1B0GUT8 65 aa7.17□□□□□ -1.26
NUDCD3-203ENST00000460110 TMEM213A2RRL7 107 aa7.17□□□□□ -1.26
NUDCD3-203ENST00000460110 VAMP3Q15836 100 aa7.17□□□□□ -1.26
NUDCD3-203ENST00000460110 LYZL1Q6UWQ5 148 aa7.17□□□□□ -1.26
NUDCD3-203ENST00000460110 LYPD1Q8N2G4 141 aa7.17□□□□□ -1.26
NUDCD3-203ENST00000460110 KLHL30-AS1Q8NEE0 82 aa7.17□□□□□ -1.26
NUDCD3-203ENST00000460110 WIPF2Q8TF74 440 aaPredicted RBP7.17□□□□□ -1.26
NUDCD3-203ENST00000460110 Q6ZQT7 251 aa7.17□□□□□ -1.26
NUDCD3-203ENST00000460110 TMEM136Q6ZRR5 245 aa7.17□□□□□ -1.26
NUDCD3-203ENST00000460110 PSMG3-AS1Q96PY0 264 aa7.17□□□□□ -1.26
NUDCD3-203ENST00000460110 SLC50A1Q9BRV3 221 aa7.17□□□□□ -1.26
NUDCD3-203ENST00000460110 KLF12Q9Y4X4 402 aa7.17□□□□□ -1.26
NUDCD3-203ENST00000460110 SMIM27A0A1W2PRY6 76 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 ZNF80P51504 273 aaPredicted RBP7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 SLURP1P55000 103 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 FXYD7P58549 80 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 RIGQ13278 110 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 MIEN1Q9BRT3 115 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 IGHV4OR15-8A0A075B7B6 117 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 A0A087WW49 117 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 NDUFA4O00483 81 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 IGLV2-11P01706 119 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 BMI1P35226 326 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 OR11H1Q8NG94 326 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 DYNLRB2Q8TF09 96 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 ALKBH7Q9BT30 221 aaPredicted RBP7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 FABP5P3A8MUU1 101 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 M0R381 172 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 MT-ND6P03923 174 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 TYMSP04818 313 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 CRIP1P50238 77 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 FOXE3Q13461 319 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 Q6YL49 198 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 GNB1LQ9BYB4 327 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 NRN1Q9NPD7 142 aa7.16□□□□□ -1.26
NUDCD3-203ENST00000460110 MRPS12O15235 138 aaKnown RBP7.15□□□□□ -1.26
NUDCD3-203ENST00000460110 HOXD3P31249 432 aaPredicted RBP7.15□□□□□ -1.26
NUDCD3-203ENST00000460110 SPANXN1Q5VSR9 72 aa7.15□□□□□ -1.26
NUDCD3-203ENST00000460110 ATOH7Q8N100 152 aa7.15□□□□□ -1.26
NUDCD3-203ENST00000460110 PRSS3P2Q8NHM4 247 aa7.15□□□□□ -1.26
NUDCD3-203ENST00000460110 RCHY1Q96PM5 261 aa7.15□□□□□ -1.26
NUDCD3-203ENST00000460110 MLST8Q9BVC4 326 aa7.15□□□□□ -1.26
NUDCD3-203ENST00000460110 SMKR1H3BMG3 65 aa7.15□□□□□ -1.26
NUDCD3-203ENST00000460110 NCR2O95944 276 aa7.15□□□□□ -1.26
NUDCD3-203ENST00000460110 KIR3DS1Q14943 382 aa7.15□□□□□ -1.26
NUDCD3-203ENST00000460110 Q6ZN92 141 aa7.15□□□□□ -1.26
NUDCD3-203ENST00000460110 M0R2Z0 102 aa7.15□□□□□ -1.27
NUDCD3-203ENST00000460110 TCTAP57738 103 aa7.15□□□□□ -1.27
NUDCD3-203ENST00000460110 RBX1P62877 108 aa7.15□□□□□ -1.27
NUDCD3-203ENST00000460110 TDRG1Q3Y452 100 aa7.15□□□□□ -1.27
NUDCD3-203ENST00000460110 GDF5OSQ5U4N7 250 aa7.15□□□□□ -1.27
NUDCD3-203ENST00000460110 FER1L6-AS1Q8NA97 138 aa7.15□□□□□ -1.27
NUDCD3-203ENST00000460110 MSRB1Q9NZV6 116 aa7.15□□□□□ -1.27
NUDCD3-203ENST00000460110 A0A096LNT2 108 aa7.14□□□□□ -1.27
NUDCD3-203ENST00000460110 HNRNPA3P51991 378 aaKnown RBP7.14□□□□□ -1.27
NUDCD3-203ENST00000460110 NSUN5P1Q3KNT7 163 aa7.14□□□□□ -1.27
NUDCD3-203ENST00000460110 ERASQ7Z444 233 aa7.14□□□□□ -1.27
NUDCD3-203ENST00000460110 TMEM190Q8WZ59 177 aa7.14□□□□□ -1.27
NUDCD3-203ENST00000460110 TRAV12-2A0A075B6T6 113 aa7.14□□□□□ -1.27
NUDCD3-203ENST00000460110 IGHV7-4-1A0A0J9YVY3 117 aa7.14□□□□□ -1.27
NUDCD3-203ENST00000460110 HINT1P49773 126 aaPredicted RBP7.14□□□□□ -1.27
NUDCD3-203ENST00000460110 Q6ZVH6 145 aa7.14□□□□□ -1.27
NUDCD3-203ENST00000460110 FAM231DQ6ZW35 169 aa7.14□□□□□ -1.27
NUDCD3-203ENST00000460110 AMN1Q8IY45 258 aa7.14□□□□□ -1.27
NUDCD3-203ENST00000460110 H3BVH4 76 aa7.14□□□□□ -1.27
NUDCD3-203ENST00000460110 CCL25O15444 150 aa7.14□□□□□ -1.27
NUDCD3-203ENST00000460110 ID1P41134 155 aa7.14□□□□□ -1.27
NUDCD3-203ENST00000460110 C20orf173Q96LM9 149 aa7.14□□□□□ -1.27
NUDCD3-203ENST00000460110 SMPXQ9UHP9 88 aa7.14□□□□□ -1.27
NUDCD3-203ENST00000460110 IGHV3OR16-12A0A075B7B8 117 aa7.13□□□□□ -1.27
NUDCD3-203ENST00000460110 TCTEX1D4Q5JR98 221 aa7.13□□□□□ -1.27
NUDCD3-203ENST00000460110 C16orf54Q6UWD8 224 aa7.13□□□□□ -1.27
NUDCD3-203ENST00000460110 LRRC75A-AS1Q8N1F1 130 aa7.13□□□□□ -1.27
NUDCD3-203ENST00000460110 MCRIP2Q9BUT9 160 aaKnown RBP7.13□□□□□ -1.27
NUDCD3-203ENST00000460110 DNAJC9-AS1A6NH13 148 aa7.13□□□□□ -1.27
NUDCD3-203ENST00000460110 IGHG4P01861 327 aa7.13□□□□□ -1.27
NUDCD3-203ENST00000460110 CKS2P33552 79 aa7.13□□□□□ -1.27
NUDCD3-203ENST00000460110 TRAV12-3A0A0B4J271 114 aa7.13□□□□□ -1.27
NUDCD3-203ENST00000460110 PAFAH1B2P68402 229 aa7.13□□□□□ -1.27
NUDCD3-203ENST00000460110 FA2HQ7L5A8 372 aa7.13□□□□□ -1.27
NUDCD3-203ENST00000460110 ZNF418Q8TF45 676 aaPredicted RBP7.13□□□□□ -1.27
NUDCD3-203ENST00000460110 ZNF702PQ9H963 129 aa7.13□□□□□ -1.27
NUDCD3-203ENST00000460110 TRAV9-1A0A075B6T8 112 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms