RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 S100A7AQ86SG5 101 aa12.28□□□□□ -0.44
CMTM3-203ENST00000460097 TNFRSF14Q92956 283 aa12.28□□□□□ -0.44
CMTM3-203ENST00000460097 IFI27L1Q96BM0 104 aa12.28□□□□□ -0.44
CMTM3-203ENST00000460097 RITA1Q96K30 269 aa12.28□□□□□ -0.44
CMTM3-203ENST00000460097 PRELID3AQ96N28 172 aa12.28□□□□□ -0.44
CMTM3-203ENST00000460097 ZMAT4Q9H898 229 aa12.28□□□□□ -0.44
CMTM3-203ENST00000460097 THYN1Q9P016 225 aa12.28□□□□□ -0.44
CMTM3-203ENST00000460097 SMIM13P0DJ93 91 aa12.27□□□□□ -0.45
CMTM3-203ENST00000460097 DLX1P56177 255 aa12.27□□□□□ -0.45
CMTM3-203ENST00000460097 SRSF2Q01130 221 aaKnown RBP12.27□□□□□ -0.45
CMTM3-203ENST00000460097 PDE6HQ13956 83 aa12.27□□□□□ -0.45
CMTM3-203ENST00000460097 SIGLEC15Q6ZMC9 328 aa12.27□□□□□ -0.45
CMTM3-203ENST00000460097 LHFPL4Q7Z7J7 247 aa12.27□□□□□ -0.45
CMTM3-203ENST00000460097 OR8A1Q8NGG7 326 aa12.27□□□□□ -0.45
CMTM3-203ENST00000460097 SHANK2-AS3Q9BTD1 123 aa12.27□□□□□ -0.45
CMTM3-203ENST00000460097 TRAV8-1A0A0A6YYK1 113 aa12.26□□□□□ -0.45
CMTM3-203ENST00000460097 SLC25A17O43808 307 aa12.26□□□□□ -0.45
CMTM3-203ENST00000460097 RBP4P02753 201 aa12.26□□□□□ -0.45
CMTM3-203ENST00000460097 CACNG7P62955 275 aa12.26□□□□□ -0.45
CMTM3-203ENST00000460097 CUBNO60494 3623 aa12.26□□□□□ -0.45
CMTM3-203ENST00000460097 D6R8Y8 96 aa12.25□□□□□ -0.45
CMTM3-203ENST00000460097 H3BRN7 92 aa12.25□□□□□ -0.45
CMTM3-203ENST00000460097 IGHV3-48P01763 117 aa12.25□□□□□ -0.45
CMTM3-203ENST00000460097 IGHV1-8P0DP01 117 aa12.25□□□□□ -0.45
CMTM3-203ENST00000460097 CRIP1P50238 77 aa12.25□□□□□ -0.45
CMTM3-203ENST00000460097 PRB3Q04118 309 aaPredicted RBP12.25□□□□□ -0.45
CMTM3-203ENST00000460097 RUSC1-AS1Q66K80 236 aa12.25□□□□□ -0.45
CMTM3-203ENST00000460097 NF1P21359 2839 aa12.25□□□□□ -0.45
CMTM3-203ENST00000460097 IGHV1-69DA0A0B4J2H0 117 aa12.25□□□□□ -0.45
CMTM3-203ENST00000460097 SNAI2O43623 268 aa12.25□□□□□ -0.45
CMTM3-203ENST00000460097 IGHV1-69P01742 117 aa12.25□□□□□ -0.45
CMTM3-203ENST00000460097 TMEM11P17152 192 aa12.25□□□□□ -0.45
CMTM3-203ENST00000460097 PRR31Q5SQ13 230 aa12.25□□□□□ -0.45
CMTM3-203ENST00000460097 SAMD5Q5TGI4 173 aa12.25□□□□□ -0.45
CMTM3-203ENST00000460097 SMPXQ9UHP9 88 aa12.25□□□□□ -0.45
CMTM3-203ENST00000460097 I3L2K1 104 aa12.24□□□□□ -0.45
CMTM3-203ENST00000460097 UBE2E1P51965 193 aa12.24□□□□□ -0.45
CMTM3-203ENST00000460097 KLRD1Q13241 179 aa12.24□□□□□ -0.45
CMTM3-203ENST00000460097 PLGLAQ15195 96 aa12.24□□□□□ -0.45
CMTM3-203ENST00000460097 HCP5Q6MZN7 132 aa12.24□□□□□ -0.45
CMTM3-203ENST00000460097 BRD3OSQ6XYD6 125 aa12.24□□□□□ -0.45
CMTM3-203ENST00000460097 EXOC3-AS1Q8N2X6 119 aa12.24□□□□□ -0.45
CMTM3-203ENST00000460097 RNF5Q99942 180 aa12.24□□□□□ -0.45
CMTM3-203ENST00000460097 TM2D2Q9BX73 214 aa12.24□□□□□ -0.45
CMTM3-203ENST00000460097 MRPS12O15235 138 aaKnown RBP12.23□□□□□ -0.45
CMTM3-203ENST00000460097 LYZP61626 148 aa12.23□□□□□ -0.45
CMTM3-203ENST00000460097 SAMD13Q5VXD3 122 aa12.23□□□□□ -0.45
CMTM3-203ENST00000460097 FOXI2Q6ZQN5 318 aa12.23□□□□□ -0.45
CMTM3-203ENST00000460097 C9orf139Q6ZV77 190 aa12.23□□□□□ -0.45
CMTM3-203ENST00000460097 BCL6BQ8N143 479 aaPredicted RBP12.23□□□□□ -0.45
CMTM3-203ENST00000460097 TEX22C9J3V5 150 aa12.23□□□□□ -0.45
CMTM3-203ENST00000460097 FAM106CPP0CH98 169 aa12.23□□□□□ -0.45
CMTM3-203ENST00000460097 TAL2Q16559 108 aa12.23□□□□□ -0.45
CMTM3-203ENST00000460097 FAM106AQ4KMX7 169 aa12.23□□□□□ -0.45
CMTM3-203ENST00000460097 MRPL51Q4U2R6 128 aaKnown RBP12.23□□□□□ -0.45
CMTM3-203ENST00000460097 RASL11BQ9BPW5 248 aa12.23□□□□□ -0.45
CMTM3-203ENST00000460097 TPSG1Q9NRR2 321 aa12.23□□□□□ -0.45
CMTM3-203ENST00000460097 SIGLEC9Q9Y336 463 aa12.23□□□□□ -0.45
CMTM3-203ENST00000460097 A0A1W2PRD5 423 aa12.22□□□□□ -0.45
CMTM3-203ENST00000460097 A0A1W2PRF3 423 aa12.22□□□□□ -0.45
CMTM3-203ENST00000460097 A0A1W2PRM7 423 aa12.22□□□□□ -0.45
CMTM3-203ENST00000460097 F8W1H4 67 aa12.22□□□□□ -0.45
CMTM3-203ENST00000460097 J3QR89 54 aa12.22□□□□□ -0.45
CMTM3-203ENST00000460097 ZNF207O43670 478 aaKnown RBP12.22□□□□□ -0.45
CMTM3-203ENST00000460097 EVI2AP22794 236 aa12.22□□□□□ -0.45
CMTM3-203ENST00000460097 COX7A1P24310 79 aa12.22□□□□□ -0.45
CMTM3-203ENST00000460097 VGLL1Q99990 258 aa12.22□□□□□ -0.45
CMTM3-203ENST00000460097 TMEM133Q9H2Q1 129 aa12.22□□□□□ -0.45
CMTM3-203ENST00000460097 HILPDAQ9Y5L2 63 aa12.22□□□□□ -0.45
CMTM3-203ENST00000460097 H3BTX0 84 aa12.21□□□□□ -0.45
CMTM3-203ENST00000460097 NPFFO15130 113 aa12.21□□□□□ -0.45
CMTM3-203ENST00000460097 IGKV1-17P01599 117 aa12.21□□□□□ -0.45
CMTM3-203ENST00000460097 LYZL1Q6UWQ5 148 aa12.21□□□□□ -0.45
CMTM3-203ENST00000460097 PHLDA1Q8WV24 401 aaPredicted RBP12.21□□□□□ -0.45
CMTM3-203ENST00000460097 CNFNQ9BYD5 112 aa12.21□□□□□ -0.45
CMTM3-203ENST00000460097 JMJD1CQ15652 2540 aa12.21□□□□□ -0.46
CMTM3-203ENST00000460097 WI2-2373I1.2A0A1W2PRP0 233 aa12.2□□□□□ -0.46
CMTM3-203ENST00000460097 DIAPH2-AS1Q14236 149 aa12.2□□□□□ -0.46
CMTM3-203ENST00000460097 OR11H6Q8NGC7 330 aa12.2□□□□□ -0.46
CMTM3-203ENST00000460097 ZNF418Q8TF45 676 aaPredicted RBP12.2□□□□□ -0.46
CMTM3-203ENST00000460097 SIGMAR1Q99720 223 aa12.2□□□□□ -0.46
CMTM3-203ENST00000460097 PCP2Q8IVA1 136 aa12.2□□□□□ -0.46
CMTM3-203ENST00000460097 TIMM8BQ9Y5J9 83 aaPredicted RBP12.2□□□□□ -0.46
CMTM3-203ENST00000460097 E9PLD3 99 aa12.19□□□□□ -0.46
CMTM3-203ENST00000460097 LINC01619G3V211 115 aa12.19□□□□□ -0.46
CMTM3-203ENST00000460097 ATP5LO75964 103 aa12.19□□□□□ -0.46
CMTM3-203ENST00000460097 FCER1GP30273 86 aa12.19□□□□□ -0.46
CMTM3-203ENST00000460097 S100A7P31151 101 aa12.19□□□□□ -0.46
CMTM3-203ENST00000460097 SAA4P35542 130 aa12.19□□□□□ -0.46
CMTM3-203ENST00000460097 DEFB112Q30KQ8 113 aa12.19□□□□□ -0.46
CMTM3-203ENST00000460097 PPP1R27Q86WC6 154 aa12.19□□□□□ -0.46
CMTM3-203ENST00000460097 AMN1Q8IY45 258 aa12.19□□□□□ -0.46
CMTM3-203ENST00000460097 ZNF48Q96MX3 618 aaPredicted RBP12.19□□□□□ -0.46
CMTM3-203ENST00000460097 NXT2Q9NPJ8 142 aaKnown RBP12.19□□□□□ -0.46
CMTM3-203ENST00000460097 HHLA3Q9XRX5 114 aa12.19□□□□□ -0.46
CMTM3-203ENST00000460097 IGLC6P0CF74 106 aa12.18□□□□□ -0.46
CMTM3-203ENST00000460097 CKS2P33552 79 aa12.18□□□□□ -0.46
CMTM3-203ENST00000460097 NMUP48645 174 aa12.18□□□□□ -0.46
CMTM3-203ENST00000460097 ODF1Q14990 250 aa12.18□□□□□ -0.46
CMTM3-203ENST00000460097 CD300EQ496F6 205 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms