RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, human

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA3C-205	ENST00000458729	SPART-AS1	P0CW21	52 aa		18.53	■□□□□ 0.56
SEMA3C-205	ENST00000458729	PRR9	Q5T870	116 aa		18.53	■□□□□ 0.56
SEMA3C-205	ENST00000458729	ALKAL2	Q6UX46	152 aa		18.53	■□□□□ 0.56
SEMA3C-205	ENST00000458729	C16orf74	Q96GX8	76 aa		18.53	■□□□□ 0.56
SEMA3C-205	ENST00000458729	TREM1	Q9NP99	234 aa		18.53	■□□□□ 0.56
SEMA3C-205	ENST00000458729	AZU1	P20160	251 aa		18.52	■□□□□ 0.56
SEMA3C-205	ENST00000458729	NANOS2	P60321	138 aa	Known RBP	18.52	■□□□□ 0.56
SEMA3C-205	ENST00000458729	FLI1	Q01543	452 aa	Predicted RBP	18.52	■□□□□ 0.56
SEMA3C-205	ENST00000458729	SGK494	Q96LW2	274 aa		18.52	■□□□□ 0.56
SEMA3C-205	ENST00000458729	LINC00467	Q9BRT7	94 aa		18.52	■□□□□ 0.56
SEMA3C-205	ENST00000458729	MANBAL	Q9NQG1	85 aa		18.52	■□□□□ 0.56
SEMA3C-205	ENST00000458729	IGLV2-11	P01706	119 aa		18.51	■□□□□ 0.55
SEMA3C-205	ENST00000458729	PMS2P11	Q13670	270 aa		18.51	■□□□□ 0.55
SEMA3C-205	ENST00000458729	TMEM263	Q8WUH6	116 aa	Known RBP	18.51	■□□□□ 0.55
SEMA3C-205	ENST00000458729	CELA1	Q9UNI1	258 aa		18.51	■□□□□ 0.55
SEMA3C-205	ENST00000458729	ATP5G3	P48201	142 aa		18.5	■□□□□ 0.55
SEMA3C-205	ENST00000458729	CCL20	P78556	96 aa		18.5	■□□□□ 0.55
SEMA3C-205	ENST00000458729		Q6AWC8	147 aa		18.5	■□□□□ 0.55
SEMA3C-205	ENST00000458729	TVP23C	Q96ET8	276 aa		18.5	■□□□□ 0.55
SEMA3C-205	ENST00000458729	DKK2	Q9UBU2	259 aa		18.5	■□□□□ 0.55
SEMA3C-205	ENST00000458729	BLOC1S1	P78537	153 aa		18.49	■□□□□ 0.55
SEMA3C-205	ENST00000458729	SAPCD1	Q5SSQ6	148 aa		18.49	■□□□□ 0.55
SEMA3C-205	ENST00000458729	FAM222A	Q5U5X8	452 aa		18.49	■□□□□ 0.55
SEMA3C-205	ENST00000458729	PRNT	Q86SH4	94 aa		18.49	■□□□□ 0.55
SEMA3C-205	ENST00000458729	RNASE8	Q8TDE3	154 aa	Known RBP	18.49	■□□□□ 0.55
SEMA3C-205	ENST00000458729	GNG13	Q9P2W3	67 aa		18.49	■□□□□ 0.55
SEMA3C-205	ENST00000458729	RGS13	O14921	159 aa		18.49	■□□□□ 0.55
SEMA3C-205	ENST00000458729	EIF4E3	Q8N5X7	224 aa	Known RBP	18.49	■□□□□ 0.55
SEMA3C-205	ENST00000458729	LINC00479	Q96M42	142 aa		18.49	■□□□□ 0.55
SEMA3C-205	ENST00000458729	TRAV34	A0A0B4J273	112 aa		18.48	■□□□□ 0.55
SEMA3C-205	ENST00000458729	PLAC8L1	A1L4L8	177 aa		18.48	■□□□□ 0.55
SEMA3C-205	ENST00000458729	NUPR2	A6NF83	97 aa		18.48	■□□□□ 0.55
SEMA3C-205	ENST00000458729	LYRM9	A8MSI8	78 aa		18.48	■□□□□ 0.55
SEMA3C-205	ENST00000458729	C11orf94	C9JXX5	98 aa		18.48	■□□□□ 0.55
SEMA3C-205	ENST00000458729	ANXA2R	Q3ZCQ2	193 aa		18.48	■□□□□ 0.55
SEMA3C-205	ENST00000458729	PHLDA1	Q8WV24	401 aa	Predicted RBP	18.48	■□□□□ 0.55
SEMA3C-205	ENST00000458729	TXNDC17	Q9BRA2	123 aa		18.48	■□□□□ 0.55
SEMA3C-205	ENST00000458729	IGHV1OR15-1	A0A075B7D0	117 aa		18.47	■□□□□ 0.55
SEMA3C-205	ENST00000458729	IFNA1	P01562	189 aa		18.47	■□□□□ 0.55
SEMA3C-205	ENST00000458729	C12orf74	Q32Q52	190 aa		18.47	■□□□□ 0.55
SEMA3C-205	ENST00000458729	ZNF680	Q8NEM1	530 aa		18.47	■□□□□ 0.55
SEMA3C-205	ENST00000458729	FMC1	Q96HJ9	113 aa		18.47	■□□□□ 0.55
SEMA3C-205	ENST00000458729	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	18.47	■□□□□ 0.55
SEMA3C-205	ENST00000458729	TRAV21	A0A0B4J279	112 aa		18.46	■□□□□ 0.55
SEMA3C-205	ENST00000458729	CBY3	A6NI87	242 aa		18.46	■□□□□ 0.55
SEMA3C-205	ENST00000458729	UBE2G1	P62253	170 aa		18.46	■□□□□ 0.55
SEMA3C-205	ENST00000458729	CEMP1	Q6PRD7	247 aa	Predicted RBP	18.46	■□□□□ 0.55
SEMA3C-205	ENST00000458729	KLF12	Q9Y4X4	402 aa		18.46	■□□□□ 0.55
SEMA3C-205	ENST00000458729	AKR1C3	P42330	323 aa		18.45	■□□□□ 0.54
SEMA3C-205	ENST00000458729	SMUG1	Q53HV7	270 aa		18.45	■□□□□ 0.54
SEMA3C-205	ENST00000458729		Q6ZQT7	251 aa		18.45	■□□□□ 0.54
SEMA3C-205	ENST00000458729	TRBV6-1	A0A0K0K1D8	114 aa		18.44	■□□□□ 0.54
SEMA3C-205	ENST00000458729	S100A9	P06702	114 aa	Known RBP	18.44	■□□□□ 0.54
SEMA3C-205	ENST00000458729		Q6ZTC4	211 aa		18.44	■□□□□ 0.54
SEMA3C-205	ENST00000458729		Q86TA4	180 aa		18.44	■□□□□ 0.54
SEMA3C-205	ENST00000458729	C8orf49	Q96NF6	230 aa		18.44	■□□□□ 0.54
SEMA3C-205	ENST00000458729	ZFP30	Q9Y2G7	519 aa		18.44	■□□□□ 0.54
SEMA3C-205	ENST00000458729	SNURFL	B1AK76	121 aa		18.43	■□□□□ 0.54
SEMA3C-205	ENST00000458729	TAGLN2	P37802	199 aa	Known RBP	18.43	■□□□□ 0.54
SEMA3C-205	ENST00000458729	TMEM183B	Q1AE95	376 aa		18.43	■□□□□ 0.54
SEMA3C-205	ENST00000458729	FAM159A	Q6UWV7	190 aa		18.43	■□□□□ 0.54
SEMA3C-205	ENST00000458729	KLK5	Q9Y337	293 aa	Predicted RBP	18.43	■□□□□ 0.54
SEMA3C-205	ENST00000458729	TRAV10	A0A0B4J240	114 aa		18.42	■□□□□ 0.54
SEMA3C-205	ENST00000458729	GCG	P01275	180 aa		18.42	■□□□□ 0.54
SEMA3C-205	ENST00000458729	DAD1	P61803	113 aa		18.42	■□□□□ 0.54
SEMA3C-205	ENST00000458729	ZNF767P	Q75MW2	155 aa		18.42	■□□□□ 0.54
SEMA3C-205	ENST00000458729	NOP10	Q9NPE3	64 aa	Known RBP	18.42	■□□□□ 0.54
SEMA3C-205	ENST00000458729	SCO2	A0A1W2PP80	73 aa		18.41	■□□□□ 0.54
SEMA3C-205	ENST00000458729	MUC21	Q5SSG8	566 aa		18.41	■□□□□ 0.54
SEMA3C-205	ENST00000458729	IBA57	Q5T440	356 aa	Known RBP	18.41	■□□□□ 0.54
SEMA3C-205	ENST00000458729	C2CD4C	Q8TF44	421 aa		18.41	■□□□□ 0.54
SEMA3C-205	ENST00000458729	PFN1	P07737	140 aa	Known RBP	18.4	■□□□□ 0.54
SEMA3C-205	ENST00000458729	BCL2	P10415	239 aa		18.4	■□□□□ 0.54
SEMA3C-205	ENST00000458729	TDRG1	Q3Y452	100 aa		18.4	■□□□□ 0.54
SEMA3C-205	ENST00000458729	C11orf72	Q8NBR9	251 aa		18.4	■□□□□ 0.54
SEMA3C-205	ENST00000458729	LYPD6B	Q8NI32	183 aa		18.4	■□□□□ 0.54
SEMA3C-205	ENST00000458729	ZNF80	P51504	273 aa	Predicted RBP	18.39	■□□□□ 0.53
SEMA3C-205	ENST00000458729	MEF2B	Q02080	365 aa	Predicted RBP	18.39	■□□□□ 0.53
SEMA3C-205	ENST00000458729	DAZ2	Q13117	558 aa	Known RBP	18.39	■□□□□ 0.53
SEMA3C-205	ENST00000458729	GSN-AS1	Q9NRJ2	163 aa		18.39	■□□□□ 0.53
SEMA3C-205	ENST00000458729	VAX2	Q9UIW0	290 aa		18.39	■□□□□ 0.53
SEMA3C-205	ENST00000458729	NAGK	Q9UJ70	344 aa		18.39	■□□□□ 0.53
SEMA3C-205	ENST00000458729	TP53TG3	Q9ULZ0	132 aa		18.39	■□□□□ 0.53
SEMA3C-205	ENST00000458729	TRGV11	A0A075B6L2	103 aa		18.38	■□□□□ 0.53
SEMA3C-205	ENST00000458729	LTA	P01374	205 aa		18.38	■□□□□ 0.53
SEMA3C-205	ENST00000458729	COX8C	Q7Z4L0	72 aa		18.38	■□□□□ 0.53
SEMA3C-205	ENST00000458729	C11orf52	Q96A22	123 aa		18.38	■□□□□ 0.53
SEMA3C-205	ENST00000458729	KCNS1	Q96KK3	526 aa		18.38	■□□□□ 0.53
SEMA3C-205	ENST00000458729	DEFB131B	A0A096LNP1	70 aa		18.37	■□□□□ 0.53
SEMA3C-205	ENST00000458729	PDE6D	O43924	150 aa		18.37	■□□□□ 0.53
SEMA3C-205	ENST00000458729	DEFB130B	P0DP73	79 aa		18.37	■□□□□ 0.53
SEMA3C-205	ENST00000458729	DEFB130A	P0DP74	79 aa		18.37	■□□□□ 0.53
SEMA3C-205	ENST00000458729	TCL1A	P56279	114 aa		18.37	■□□□□ 0.53
SEMA3C-205	ENST00000458729	TEX261	Q6UWH6	196 aa		18.37	■□□□□ 0.53
SEMA3C-205	ENST00000458729	CSMD3	Q7Z407	3707 aa		18.37	■□□□□ 0.53
SEMA3C-205	ENST00000458729	ZNF415	Q09FC8	603 aa		18.36	■□□□□ 0.53
SEMA3C-205	ENST00000458729	FABP5P3	A8MUU1	101 aa		18.35	■□□□□ 0.53
SEMA3C-205	ENST00000458729	TMEM183A	Q8IXX5	376 aa		18.35	■□□□□ 0.53
SEMA3C-205	ENST00000458729	SDF2L1	Q9HCN8	221 aa		18.35	■□□□□ 0.53
SEMA3C-205	ENST00000458729	LINC00612	Q8N6U2	182 aa		18.34	■□□□□ 0.53

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