RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 F11RQ9Y624 299 aaKnown RBP9.23□□□□□ -0.93
SYNE2-207ENST00000458046 A1L4Q6 167 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 A8MWL6 223 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 BUB1B-PAK6H3BSN5 160 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 LTAP01374 205 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 IGLV1-47P01700 117 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 CRYGDP07320 174 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 CA7P43166 264 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 PLGLAQ15195 96 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 COL5A1-AS1Q5SY13 56 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 PRNTQ86SH4 94 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 STPG4Q8N801 248 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 FMC1Q96HJ9 113 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 PRSS22Q9GZN4 317 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 PVRIGQ6DKI7 326 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 GOLT1AQ6ZVE7 132 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 ATP5L2Q7Z4Y8 100 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 SPATA12Q7Z6I5 190 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 OR8B2Q96RD0 313 aa9.22□□□□□ -0.93
SYNE2-207ENST00000458046 GATD1Q8NB37 220 aa9.21□□□□□ -0.93
SYNE2-207ENST00000458046 SRSF12Q8WXF0 261 aaKnown RBP9.21□□□□□ -0.93
SYNE2-207ENST00000458046 SLC25A39Q9BZJ4 359 aaPredicted RBP9.21□□□□□ -0.93
SYNE2-207ENST00000458046 LAMTOR2Q9Y2Q5 125 aa9.21□□□□□ -0.93
SYNE2-207ENST00000458046 DOPEY2Q9Y3R5 2298 aa9.21□□□□□ -0.93
SYNE2-207ENST00000458046 C19orf71A6NCJ1 209 aa9.21□□□□□ -0.94
SYNE2-207ENST00000458046 C2orf70A6NJV1 201 aa9.21□□□□□ -0.94
SYNE2-207ENST00000458046 IGLC1P0CG04 106 aa9.21□□□□□ -0.94
SYNE2-207ENST00000458046 SMAGPQ0VAQ4 97 aa9.21□□□□□ -0.94
SYNE2-207ENST00000458046 ZNF672Q499Z4 452 aaPredicted RBP9.21□□□□□ -0.94
SYNE2-207ENST00000458046 OR8B3Q8NGG8 313 aa9.21□□□□□ -0.94
SYNE2-207ENST00000458046 C17orf77Q96MU5 243 aa9.21□□□□□ -0.94
SYNE2-207ENST00000458046 COL8A1P27658 744 aa9.2□□□□□ -0.94
SYNE2-207ENST00000458046 HINT1P49773 126 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-207ENST00000458046 ZNF138P52744 262 aa9.2□□□□□ -0.94
SYNE2-207ENST00000458046 LINC00173Q6ZV60 143 aa9.2□□□□□ -0.94
SYNE2-207ENST00000458046 LINC01560Q8TB33 94 aa9.2□□□□□ -0.94
SYNE2-207ENST00000458046 ORAOV1Q8WV07 137 aa9.2□□□□□ -0.94
SYNE2-207ENST00000458046 S4R3C0 116 aa9.2□□□□□ -0.94
SYNE2-207ENST00000458046 TLN1Q9Y490 2541 aaKnown RBP9.2□□□□□ -0.94
SYNE2-207ENST00000458046 IGLL1P15814 213 aa9.2□□□□□ -0.94
SYNE2-207ENST00000458046 SPANXB1Q9NS25 103 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-207ENST00000458046 CFAP46Q8IYW2 2715 aa9.19□□□□□ -0.94
SYNE2-207ENST00000458046 F5H697 171 aa9.19□□□□□ -0.94
SYNE2-207ENST00000458046 I3L2K1 104 aa9.19□□□□□ -0.94
SYNE2-207ENST00000458046 RHODO00212 210 aa9.19□□□□□ -0.94
SYNE2-207ENST00000458046 ABCA4P78363 2273 aa9.19□□□□□ -0.94
SYNE2-207ENST00000458046 TRAV9-2A0A087WT02 112 aa9.19□□□□□ -0.94
SYNE2-207ENST00000458046 LY6HO94772 140 aa9.19□□□□□ -0.94
SYNE2-207ENST00000458046 TSPOP30536 169 aa9.19□□□□□ -0.94
SYNE2-207ENST00000458046 KLF17Q5JT82 389 aaPredicted RBP9.19□□□□□ -0.94
SYNE2-207ENST00000458046 Q6ZVH6 145 aa9.19□□□□□ -0.94
SYNE2-207ENST00000458046 Q86TA4 180 aa9.19□□□□□ -0.94
SYNE2-207ENST00000458046 OTORQ9NRC9 128 aa9.19□□□□□ -0.94
SYNE2-207ENST00000458046 FAM30AQ9NZY2 134 aa9.19□□□□□ -0.94
SYNE2-207ENST00000458046 TP73-AS1Q9UF72 201 aa9.19□□□□□ -0.94
SYNE2-207ENST00000458046 TIMM8BQ9Y5J9 83 aaPredicted RBP9.19□□□□□ -0.94
SYNE2-207ENST00000458046 NDUFB8O95169 186 aa9.18□□□□□ -0.94
SYNE2-207ENST00000458046 IGKV1-17P01599 117 aa9.18□□□□□ -0.94
SYNE2-207ENST00000458046 HTR1DP28221 377 aa9.18□□□□□ -0.94
SYNE2-207ENST00000458046 UBE2E1P51965 193 aa9.18□□□□□ -0.94
SYNE2-207ENST00000458046 UBE2E2Q96LR5 201 aa9.18□□□□□ -0.94
SYNE2-207ENST00000458046 FOXC2Q99958 501 aa9.18□□□□□ -0.94
SYNE2-207ENST00000458046 ZNF492Q9P255 531 aa9.18□□□□□ -0.94
SYNE2-207ENST00000458046 IGHV1-24A0A0C4DH33 117 aa9.18□□□□□ -0.94
SYNE2-207ENST00000458046 K7EMT4 169 aa9.18□□□□□ -0.94
SYNE2-207ENST00000458046 HOXA3O43365 443 aaPredicted RBP9.18□□□□□ -0.94
SYNE2-207ENST00000458046 IGLV2-11P01706 119 aa9.18□□□□□ -0.94
SYNE2-207ENST00000458046 PRTN3P24158 256 aa9.18□□□□□ -0.94
SYNE2-207ENST00000458046 TMEM70Q9BUB7 260 aa9.18□□□□□ -0.94
SYNE2-207ENST00000458046 HILPDAQ9Y5L2 63 aa9.18□□□□□ -0.94
SYNE2-207ENST00000458046 ITPR3Q14573 2671 aa9.18□□□□□ -0.94
SYNE2-207ENST00000458046 TIMM23O14925 209 aa9.18□□□□□ -0.94
SYNE2-207ENST00000458046 FAM120AOSQ5T036 256 aa9.18□□□□□ -0.94
SYNE2-207ENST00000458046 RPL7P18124 248 aaKnown RBP9.17□□□□□ -0.94
SYNE2-207ENST00000458046 NDFIP1Q9BT67 221 aa9.17□□□□□ -0.94
SYNE2-207ENST00000458046 ERG28Q9UKR5 140 aa9.17□□□□□ -0.94
SYNE2-207ENST00000458046 HIST1H1AQ02539 215 aaPredicted RBP9.17□□□□□ -0.94
SYNE2-207ENST00000458046 ZC2HC1AQ96GY0 325 aa9.17□□□□□ -0.94
SYNE2-207ENST00000458046 ARHGAP32A7KAX9 2087 aa9.16□□□□□ -0.94
SYNE2-207ENST00000458046 NBASA2RRP1 2371 aa9.16□□□□□ -0.94
SYNE2-207ENST00000458046 ADARB2-AS1A8MUL3 147 aa9.16□□□□□ -0.94
SYNE2-207ENST00000458046 K7EIM0 57 aa9.16□□□□□ -0.94
SYNE2-207ENST00000458046 LEPROTL1O95214 131 aa9.16□□□□□ -0.94
SYNE2-207ENST00000458046 ZNF502Q8TBZ5 544 aa9.16□□□□□ -0.94
SYNE2-207ENST00000458046 GFRA4Q9GZZ7 299 aa9.16□□□□□ -0.94
SYNE2-207ENST00000458046 hDV102S1A0JD36 115 aa9.16□□□□□ -0.94
SYNE2-207ENST00000458046 M0R3E3 92 aa9.16□□□□□ -0.94
SYNE2-207ENST00000458046 PLA2G1BP04054 148 aaKnown RBP9.16□□□□□ -0.94
SYNE2-207ENST00000458046 IL4P05112 153 aa9.16□□□□□ -0.94
SYNE2-207ENST00000458046 UNQ5815/PRO19632Q6UWF5 114 aa9.16□□□□□ -0.94
SYNE2-207ENST00000458046 COX8CQ7Z4L0 72 aa9.16□□□□□ -0.94
SYNE2-207ENST00000458046 TMEM14CQ9P0S9 112 aa9.16□□□□□ -0.94
SYNE2-207ENST00000458046 SOX21Q9Y651 276 aaPredicted RBP9.16□□□□□ -0.94
SYNE2-207ENST00000458046 TRBV19A0A075B6N1 114 aa9.15□□□□□ -0.94
SYNE2-207ENST00000458046 ARMS2P0C7Q2 107 aa9.15□□□□□ -0.94
SYNE2-207ENST00000458046 BPIFA4PQ86YQ2 179 aa9.15□□□□□ -0.94
SYNE2-207ENST00000458046 LY6LH3BQJ8 138 aa9.15□□□□□ -0.95
SYNE2-207ENST00000458046 SYS1-DBNDD2H3BUS1 97 aa9.15□□□□□ -0.95
SYNE2-207ENST00000458046 APOHP02749 345 aaPredicted RBP9.15□□□□□ -0.95
SYNE2-207ENST00000458046 ZNF491Q8N8L2 437 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms