RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 UBE2NLQ5JXB2 153 aa9.82□□□□□ -0.84
SF3B4-202ENST00000457312 CFAP126Q5VTH2 177 aa9.82□□□□□ -0.84
SF3B4-202ENST00000457312 ZNF546Q86UE3 836 aa9.82□□□□□ -0.84
SF3B4-202ENST00000457312 PRR13Q9NZ81 148 aa9.82□□□□□ -0.84
SF3B4-202ENST00000457312 IGKV2-40A0A087WW87 121 aaPredicted RBP9.81□□□□□ -0.84
SF3B4-202ENST00000457312 A0A087WX48 190 aa9.81□□□□□ -0.84
SF3B4-202ENST00000457312 IGKV2D-40P01614 121 aaPredicted RBP9.81□□□□□ -0.84
SF3B4-202ENST00000457312 Q6ZRP5 223 aa9.81□□□□□ -0.84
SF3B4-202ENST00000457312 MARCH1Q8TCQ1 289 aa9.81□□□□□ -0.84
SF3B4-202ENST00000457312 YIPF6Q96EC8 236 aa9.81□□□□□ -0.84
SF3B4-202ENST00000457312 SMCO3A2RU48 225 aa9.8□□□□□ -0.84
SF3B4-202ENST00000457312 CRPP02741 224 aa9.8□□□□□ -0.84
SF3B4-202ENST00000457312 SLPIP03973 132 aa9.8□□□□□ -0.84
SF3B4-202ENST00000457312 AKR1C4P17516 323 aa9.8□□□□□ -0.84
SF3B4-202ENST00000457312 MAJINQ3KP22 176 aa9.8□□□□□ -0.84
SF3B4-202ENST00000457312 ZNF492Q9P255 531 aa9.8□□□□□ -0.84
SF3B4-202ENST00000457312 PGPA6NDG6 321 aa9.79□□□□□ -0.84
SF3B4-202ENST00000457312 TCRBP04435 133 aa9.79□□□□□ -0.84
SF3B4-202ENST00000457312 MGST1P10620 155 aaKnown RBP9.79□□□□□ -0.84
SF3B4-202ENST00000457312 GUK1Q16774 197 aa9.79□□□□□ -0.84
SF3B4-202ENST00000457312 RNASE10Q5GAN6 216 aaKnown RBP9.79□□□□□ -0.84
SF3B4-202ENST00000457312 TMEM78Q5T7P6 136 aa9.79□□□□□ -0.84
SF3B4-202ENST00000457312 STPG4Q8N801 248 aa9.79□□□□□ -0.84
SF3B4-202ENST00000457312 CLRN3Q8NCR9 226 aa9.79□□□□□ -0.84
SF3B4-202ENST00000457312 CHAC2Q8WUX2 184 aa9.79□□□□□ -0.84
SF3B4-202ENST00000457312 RTBDNQ9BSG5 229 aaPredicted RBP9.79□□□□□ -0.84
SF3B4-202ENST00000457312 CIDEAO60543 219 aa9.78□□□□□ -0.84
SF3B4-202ENST00000457312 INPP1P49441 399 aa9.78□□□□□ -0.84
SF3B4-202ENST00000457312 KRTAP26-1Q6PEX3 210 aa9.78□□□□□ -0.84
SF3B4-202ENST00000457312 FAM159AQ6UWV7 190 aa9.78□□□□□ -0.84
SF3B4-202ENST00000457312 TMEM75Q8N9X5 138 aa9.78□□□□□ -0.84
SF3B4-202ENST00000457312 C20orf85Q9H1P6 137 aa9.78□□□□□ -0.84
SF3B4-202ENST00000457312 hDV102S1A0JD36 115 aa9.77□□□□□ -0.85
SF3B4-202ENST00000457312 SMIM18P0DKX4 95 aa9.77□□□□□ -0.85
SF3B4-202ENST00000457312 ZNF266Q14584 549 aa9.77□□□□□ -0.85
SF3B4-202ENST00000457312 SURF2Q15527 256 aaPredicted RBP9.77□□□□□ -0.85
SF3B4-202ENST00000457312 DMRTA1Q5VZB9 504 aa9.77□□□□□ -0.85
SF3B4-202ENST00000457312 TERB2Q8NHR7 220 aa9.77□□□□□ -0.85
SF3B4-202ENST00000457312 Q9UF83 564 aa9.77□□□□□ -0.85
SF3B4-202ENST00000457312 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.76□□□□□ -0.85
SF3B4-202ENST00000457312 IGKV2-24A0A0C4DH68 120 aa9.76□□□□□ -0.85
SF3B4-202ENST00000457312 K7EPK0 472 aa9.76□□□□□ -0.85
SF3B4-202ENST00000457312 CD3DP04234 171 aa9.76□□□□□ -0.85
SF3B4-202ENST00000457312 ZNF138P52744 262 aa9.76□□□□□ -0.85
SF3B4-202ENST00000457312 PXDC1Q5TGL8 231 aa9.76□□□□□ -0.85
SF3B4-202ENST00000457312 Q6AWC8 147 aa9.76□□□□□ -0.85
SF3B4-202ENST00000457312 LYZL2Q7Z4W2 148 aa9.76□□□□□ -0.85
SF3B4-202ENST00000457312 C15orf54Q8N8G6 183 aa9.76□□□□□ -0.85
SF3B4-202ENST00000457312 SAMD12Q8N8I0 201 aa9.76□□□□□ -0.85
SF3B4-202ENST00000457312 NAGKQ9UJ70 344 aa9.76□□□□□ -0.85
SF3B4-202ENST00000457312 C14orf166Q9Y224 244 aaKnown RBP9.76□□□□□ -0.85
SF3B4-202ENST00000457312 A0A0B4J2A0 478 aa9.75□□□□□ -0.85
SF3B4-202ENST00000457312 TRBV7-9A0A0J9YWB2 115 aa9.75□□□□□ -0.85
SF3B4-202ENST00000457312 GNRH2O43555 120 aa9.75□□□□□ -0.85
SF3B4-202ENST00000457312 NDUFB4O95168 129 aa9.75□□□□□ -0.85
SF3B4-202ENST00000457312 COX6A2Q02221 97 aa9.75□□□□□ -0.85
SF3B4-202ENST00000457312 SLC38A11Q08AI6 406 aa9.75□□□□□ -0.85
SF3B4-202ENST00000457312 SCGB2B2Q4G0G5 96 aa9.75□□□□□ -0.85
SF3B4-202ENST00000457312 KCNIP4Q6PIL6 250 aa9.75□□□□□ -0.85
SF3B4-202ENST00000457312 SNX29P2Q8IUI4 249 aa9.75□□□□□ -0.85
SF3B4-202ENST00000457312 LINC00479Q96M42 142 aa9.75□□□□□ -0.85
SF3B4-202ENST00000457312 SHPKQ9UHJ6 478 aa9.75□□□□□ -0.85
SF3B4-202ENST00000457312 PRELID1Q9Y255 219 aa9.75□□□□□ -0.85
SF3B4-202ENST00000457312 TRBV19A0A075B6N1 114 aa9.74□□□□□ -0.85
SF3B4-202ENST00000457312 HIST1H1EP10412 219 aaKnown RBP9.74□□□□□ -0.85
SF3B4-202ENST00000457312 RPP30P78346 268 aaKnown RBP9.74□□□□□ -0.85
SF3B4-202ENST00000457312 OR51S1Q8NGJ8 323 aa9.74□□□□□ -0.85
SF3B4-202ENST00000457312 H3BP45 60 aa9.73□□□□□ -0.85
SF3B4-202ENST00000457312 COX7A2P2O60397 106 aa9.73□□□□□ -0.85
SF3B4-202ENST00000457312 TYMSP04818 313 aa9.73□□□□□ -0.85
SF3B4-202ENST00000457312 VAMP1P23763 118 aa9.73□□□□□ -0.85
SF3B4-202ENST00000457312 MIAQ16674 131 aa9.73□□□□□ -0.85
SF3B4-202ENST00000457312 EXOC3-AS1Q8N2X6 119 aa9.73□□□□□ -0.85
SF3B4-202ENST00000457312 SAMD10Q9BYL1 202 aa9.73□□□□□ -0.85
SF3B4-202ENST00000457312 CTDSPLO15194 276 aa9.72□□□□□ -0.85
SF3B4-202ENST00000457312 TMEM127O75204 238 aa9.72□□□□□ -0.85
SF3B4-202ENST00000457312 HOXB5P09067 269 aa9.72□□□□□ -0.85
SF3B4-202ENST00000457312 ZNF876PQ49A33 203 aa9.72□□□□□ -0.85
SF3B4-202ENST00000457312 SPANXN5Q5MJ07 72 aa9.72□□□□□ -0.85
SF3B4-202ENST00000457312 RAB2BQ8WUD1 216 aa9.72□□□□□ -0.85
SF3B4-202ENST00000457312 CIB3Q96Q77 187 aaPredicted RBP9.72□□□□□ -0.85
SF3B4-202ENST00000457312 WRBO00258 174 aa9.71□□□□□ -0.86
SF3B4-202ENST00000457312 AGPAT2O15120 278 aa9.71□□□□□ -0.86
SF3B4-202ENST00000457312 C10orf113Q5VZT2 155 aa9.71□□□□□ -0.86
SF3B4-202ENST00000457312 PRSS3P2Q8NHM4 247 aa9.71□□□□□ -0.86
SF3B4-202ENST00000457312 NRG4Q8WWG1 115 aa9.71□□□□□ -0.86
SF3B4-202ENST00000457312 AP5S1Q9NUS5 200 aa9.71□□□□□ -0.86
SF3B4-202ENST00000457312 NDUFS6O75380 124 aaKnown RBP9.7□□□□□ -0.86
SF3B4-202ENST00000457312 TBPP20226 339 aa9.7□□□□□ -0.86
SF3B4-202ENST00000457312 MPV17L2Q567V2 206 aa9.7□□□□□ -0.86
SF3B4-202ENST00000457312 INO80EQ8NBZ0 244 aaPredicted RBP9.7□□□□□ -0.86
SF3B4-202ENST00000457312 IGLV1-50A0A075B6I6 118 aa9.69□□□□□ -0.86
SF3B4-202ENST00000457312 ANGP03950 147 aaKnown RBP9.69□□□□□ -0.86
SF3B4-202ENST00000457312 TRIM63Q969Q1 353 aa9.69□□□□□ -0.86
SF3B4-202ENST00000457312 ATP5SQ99766 215 aa9.69□□□□□ -0.86
SF3B4-202ENST00000457312 SOSTQ9BQB4 213 aa9.69□□□□□ -0.86
SF3B4-202ENST00000457312 SYNGR2O43760 224 aa9.68□□□□□ -0.86
SF3B4-202ENST00000457312 MED6O75586 246 aa9.68□□□□□ -0.86
SF3B4-202ENST00000457312 CAV2P51636 162 aa9.68□□□□□ -0.86
SF3B4-202ENST00000457312 RRAS2P62070 204 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms