RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 TMPRSS5Q9H3S3 457 aa11.37□□□□□ -0.59
CPSF6-203ENST00000456847 STAG3L2P0CL84 134 aa11.37□□□□□ -0.59
CPSF6-203ENST00000456847 STAG3L3P0CL85 134 aa11.37□□□□□ -0.59
CPSF6-203ENST00000456847 TCL1AP56279 114 aa11.37□□□□□ -0.59
CPSF6-203ENST00000456847 MUC21Q5SSG8 566 aa11.37□□□□□ -0.59
CPSF6-203ENST00000456847 IBA57Q5T440 356 aaKnown RBP11.37□□□□□ -0.59
CPSF6-203ENST00000456847 RPL7L1Q6DKI1 246 aaKnown RBP11.37□□□□□ -0.59
CPSF6-203ENST00000456847 RAB24Q969Q5 203 aa11.37□□□□□ -0.59
CPSF6-203ENST00000456847 GNPNAT1Q96EK6 184 aaPredicted RBP11.37□□□□□ -0.59
CPSF6-203ENST00000456847 TP53TG3Q9ULZ0 132 aa11.37□□□□□ -0.59
CPSF6-203ENST00000456847 KLF12Q9Y4X4 402 aa11.37□□□□□ -0.59
CPSF6-203ENST00000456847 LENEPQ9Y5L5 61 aa11.37□□□□□ -0.59
CPSF6-203ENST00000456847 TRAV26-1A0A087WT03 109 aa11.36□□□□□ -0.59
CPSF6-203ENST00000456847 A0A0J9YY99 117 aa11.36□□□□□ -0.59
CPSF6-203ENST00000456847 ZNF415Q09FC8 603 aa11.36□□□□□ -0.59
CPSF6-203ENST00000456847 IQCF2Q8IXL9 164 aa11.36□□□□□ -0.59
CPSF6-203ENST00000456847 ACTR3CQ9C0K3 210 aaPredicted RBP11.36□□□□□ -0.59
CPSF6-203ENST00000456847 DNAH10Q8IVF4 4471 aa11.35□□□□□ -0.59
CPSF6-203ENST00000456847 HOXA5P20719 270 aa11.35□□□□□ -0.59
CPSF6-203ENST00000456847 GCHFRP30047 84 aa11.35□□□□□ -0.59
CPSF6-203ENST00000456847 CCL18P55774 89 aa11.35□□□□□ -0.59
CPSF6-203ENST00000456847 GNG5P63218 68 aa11.35□□□□□ -0.59
CPSF6-203ENST00000456847 LGALS9BQ3B8N2 356 aa11.35□□□□□ -0.59
CPSF6-203ENST00000456847 TMED6Q8WW62 240 aa11.35□□□□□ -0.59
CPSF6-203ENST00000456847 FAM3BP58499 235 aaPredicted RBP11.35□□□□□ -0.59
CPSF6-203ENST00000456847 NAGKQ9UJ70 344 aa11.35□□□□□ -0.59
CPSF6-203ENST00000456847 CXorf1O96002 111 aa11.34□□□□□ -0.59
CPSF6-203ENST00000456847 LINC00336Q6ZUF6 198 aa11.34□□□□□ -0.59
CPSF6-203ENST00000456847 ARL6IP6Q8N6S5 226 aa11.34□□□□□ -0.59
CPSF6-203ENST00000456847 ST6GAL2Q96JF0 529 aa11.34□□□□□ -0.59
CPSF6-203ENST00000456847 MRPL16Q9NX20 251 aaKnown RBP11.34□□□□□ -0.59
CPSF6-203ENST00000456847 ARPC5O15511 151 aa11.33□□□□□ -0.6
CPSF6-203ENST00000456847 SPINK4O60575 86 aa11.33□□□□□ -0.6
CPSF6-203ENST00000456847 Q6AWC8 147 aa11.33□□□□□ -0.6
CPSF6-203ENST00000456847 FAM159AQ6UWV7 190 aa11.33□□□□□ -0.6
CPSF6-203ENST00000456847 TMEM167BQ9NRX6 74 aa11.33□□□□□ -0.6
CPSF6-203ENST00000456847 TRAV8-1A0A0A6YYK1 113 aa11.33□□□□□ -0.6
CPSF6-203ENST00000456847 F6UZH7 168 aa11.33□□□□□ -0.6
CPSF6-203ENST00000456847 C5orf17Q8NAS9 161 aa11.33□□□□□ -0.6
CPSF6-203ENST00000456847 NDFIP1Q9BT67 221 aa11.33□□□□□ -0.6
CPSF6-203ENST00000456847 TRGV11A0A075B6L2 103 aa11.32□□□□□ -0.6
CPSF6-203ENST00000456847 K7EQM0 130 aa11.32□□□□□ -0.6
CPSF6-203ENST00000456847 TMEM183BQ1AE95 376 aa11.32□□□□□ -0.6
CPSF6-203ENST00000456847 TMEM183AQ8IXX5 376 aa11.32□□□□□ -0.6
CPSF6-203ENST00000456847 TREM1Q9NP99 234 aa11.32□□□□□ -0.6
CPSF6-203ENST00000456847 FRAS1Q86XX4 4008 aa11.32□□□□□ -0.6
CPSF6-203ENST00000456847 SERTM2A0A1B0GWG4 89 aa11.31□□□□□ -0.6
CPSF6-203ENST00000456847 G3V3Q6 166 aa11.31□□□□□ -0.6
CPSF6-203ENST00000456847 IGHV3-53P01767 116 aa11.31□□□□□ -0.6
CPSF6-203ENST00000456847 AKR1C8PQ5T2L2 129 aa11.31□□□□□ -0.6
CPSF6-203ENST00000456847 C18orf15Q96N68 181 aa11.31□□□□□ -0.6
CPSF6-203ENST00000456847 SMLR1H3BR10 107 aa11.31□□□□□ -0.6
CPSF6-203ENST00000456847 TAAR5O14804 337 aa11.31□□□□□ -0.6
CPSF6-203ENST00000456847 Q6ZR54 194 aa11.31□□□□□ -0.6
CPSF6-203ENST00000456847 SSX7Q7RTT5 188 aa11.31□□□□□ -0.6
CPSF6-203ENST00000456847 SGK494Q96LW2 274 aa11.31□□□□□ -0.6
CPSF6-203ENST00000456847 LINC00588Q9Y4M8 146 aa11.31□□□□□ -0.6
CPSF6-203ENST00000456847 TRAV21A0A0B4J279 112 aa11.3□□□□□ -0.6
CPSF6-203ENST00000456847 CTXND1A0A1B0GTU2 59 aa11.3□□□□□ -0.6
CPSF6-203ENST00000456847 SOHLH1Q5JUK2 328 aa11.3□□□□□ -0.6
CPSF6-203ENST00000456847 SUN5Q8TC36 379 aa11.3□□□□□ -0.6
CPSF6-203ENST00000456847 PRSS29PA6NIE9 313 aa11.29□□□□□ -0.6
CPSF6-203ENST00000456847 H3BNG1 76 aa11.29□□□□□ -0.6
CPSF6-203ENST00000456847 TCRAP04437 139 aa11.29□□□□□ -0.6
CPSF6-203ENST00000456847 SUMO1P63165 101 aaKnown RBP11.29□□□□□ -0.6
CPSF6-203ENST00000456847 ZNRF2Q8NHG8 242 aa11.29□□□□□ -0.6
CPSF6-203ENST00000456847 MDFICQ9P1T7 246 aa11.29□□□□□ -0.6
CPSF6-203ENST00000456847 GGTLC3B5MD39 225 aa11.29□□□□□ -0.6
CPSF6-203ENST00000456847 RTL8CO15255 209 aa11.29□□□□□ -0.6
CPSF6-203ENST00000456847 TVP23CQ96ET8 276 aa11.29□□□□□ -0.6
CPSF6-203ENST00000456847 ZNF726P1Q15940 193 aa11.28□□□□□ -0.6
CPSF6-203ENST00000456847 SPXQ9BT56 116 aa11.28□□□□□ -0.6
CPSF6-203ENST00000456847 ZFP69Q49AA0 526 aa11.27□□□□□ -0.6
CPSF6-203ENST00000456847 C1orf134Q5TEV5 83 aa11.27□□□□□ -0.6
CPSF6-203ENST00000456847 CYB561D1Q8N8Q1 229 aa11.27□□□□□ -0.6
CPSF6-203ENST00000456847 SDF2L1Q9HCN8 221 aa11.27□□□□□ -0.6
CPSF6-203ENST00000456847 EPDR1Q9UM22 224 aa11.27□□□□□ -0.6
CPSF6-203ENST00000456847 PSG8Q9UQ74 426 aa11.27□□□□□ -0.6
CPSF6-203ENST00000456847 MUC4Q99102 2169 aa11.27□□□□□ -0.61
CPSF6-203ENST00000456847 NBDYA0A0U1RRE5 68 aa11.27□□□□□ -0.61
CPSF6-203ENST00000456847 PAX4O43316 350 aa11.27□□□□□ -0.61
CPSF6-203ENST00000456847 FGF8P55075 233 aaPredicted RBP11.27□□□□□ -0.61
CPSF6-203ENST00000456847 UBE2G2P60604 165 aa11.27□□□□□ -0.61
CPSF6-203ENST00000456847 PRNTQ86SH4 94 aa11.27□□□□□ -0.61
CPSF6-203ENST00000456847 VSIG2Q96IQ7 327 aa11.27□□□□□ -0.61
CPSF6-203ENST00000456847 C8orf49Q96NF6 230 aa11.27□□□□□ -0.61
CPSF6-203ENST00000456847 A0A1W2PRE2 83 aa11.26□□□□□ -0.61
CPSF6-203ENST00000456847 IFNA7P01567 189 aa11.26□□□□□ -0.61
CPSF6-203ENST00000456847 FLI1Q01543 452 aaPredicted RBP11.26□□□□□ -0.61
CPSF6-203ENST00000456847 TDRG1Q3Y452 100 aa11.26□□□□□ -0.61
CPSF6-203ENST00000456847 KCNS1Q96KK3 526 aa11.26□□□□□ -0.61
CPSF6-203ENST00000456847 CYTL1Q9NRR1 136 aa11.26□□□□□ -0.61
CPSF6-203ENST00000456847 ICOSQ9Y6W8 199 aa11.26□□□□□ -0.61
CPSF6-203ENST00000456847 TRGV4A0A0C4DH28 118 aa11.25□□□□□ -0.61
CPSF6-203ENST00000456847 GNRH2O43555 120 aa11.25□□□□□ -0.61
CPSF6-203ENST00000456847 TYMSP04818 313 aa11.25□□□□□ -0.61
CPSF6-203ENST00000456847 TMEM75Q8N9X5 138 aa11.25□□□□□ -0.61
CPSF6-203ENST00000456847 A0A096LPF7 62 aa11.25□□□□□ -0.61
CPSF6-203ENST00000456847 MAP1LC3B2A6NCE7 125 aa11.25□□□□□ -0.61
CPSF6-203ENST00000456847 SLAQ13239 276 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms