RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 RPH3ALQ9UNE2 315 aa14.82□□□□□ -0.04
HMGB3-205ENST00000455596 KLF12Q9Y4X4 402 aa14.82□□□□□ -0.04
HMGB3-205ENST00000455596 TRGV1A0A0A0MS02 117 aa14.81□□□□□ -0.04
HMGB3-205ENST00000455596 A0A0J9YY99 117 aa14.81□□□□□ -0.04
HMGB3-205ENST00000455596 HMGB3O15347 200 aaKnown RBP14.81□□□□□ -0.04
HMGB3-205ENST00000455596 TMED6Q8WW62 240 aa14.81□□□□□ -0.04
HMGB3-205ENST00000455596 C18orf15Q96N68 181 aa14.81□□□□□ -0.04
HMGB3-205ENST00000455596 PRSS29PA6NIE9 313 aa14.8□□□□□ -0.04
HMGB3-205ENST00000455596 SPINK4O60575 86 aa14.8□□□□□ -0.04
HMGB3-205ENST00000455596 ATP6V0CP27449 155 aa14.8□□□□□ -0.04
HMGB3-205ENST00000455596 ARL6IP6Q8N6S5 226 aa14.8□□□□□ -0.04
HMGB3-205ENST00000455596 INO80EQ8NBZ0 244 aaPredicted RBP14.8□□□□□ -0.04
HMGB3-205ENST00000455596 H3BNG1 76 aa14.79□□□□□ -0.04
HMGB3-205ENST00000455596 MBP02144 154 aa14.79□□□□□ -0.04
HMGB3-205ENST00000455596 ARL14EPLP0DKL9 152 aa14.79□□□□□ -0.04
HMGB3-205ENST00000455596 SERF2P84101 59 aa14.79□□□□□ -0.04
HMGB3-205ENST00000455596 ZNF415Q09FC8 603 aa14.79□□□□□ -0.04
HMGB3-205ENST00000455596 SOHLH1Q5JUK2 328 aa14.79□□□□□ -0.04
HMGB3-205ENST00000455596 Q6AWC8 147 aa14.79□□□□□ -0.04
HMGB3-205ENST00000455596 ZNRF2Q8NHG8 242 aa14.79□□□□□ -0.04
HMGB3-205ENST00000455596 LINC00588Q9Y4M8 146 aa14.79□□□□□ -0.04
HMGB3-205ENST00000455596 STAG3L2P0CL84 134 aa14.78□□□□□ -0.04
HMGB3-205ENST00000455596 STAG3L3P0CL85 134 aa14.78□□□□□ -0.04
HMGB3-205ENST00000455596 RGS21Q2M5E4 152 aa14.78□□□□□ -0.04
HMGB3-205ENST00000455596 FXYD6-FXYD2A0A087WZ82 144 aa14.77□□□□□ -0.05
HMGB3-205ENST00000455596 MUC21Q5SSG8 566 aa14.77□□□□□ -0.05
HMGB3-205ENST00000455596 C1orf134Q5TEV5 83 aa14.77□□□□□ -0.05
HMGB3-205ENST00000455596 GOLT1AQ6ZVE7 132 aa14.77□□□□□ -0.05
HMGB3-205ENST00000455596 SSX7Q7RTT5 188 aa14.77□□□□□ -0.05
HMGB3-205ENST00000455596 RAB24Q969Q5 203 aa14.77□□□□□ -0.05
HMGB3-205ENST00000455596 DNAH10Q8IVF4 4471 aa14.77□□□□□ -0.05
HMGB3-205ENST00000455596 MUC4Q99102 2169 aa14.77□□□□□ -0.05
HMGB3-205ENST00000455596 RNF222A6NCQ9 220 aa14.76□□□□□ -0.05
HMGB3-205ENST00000455596 OR2T35Q8NGX2 323 aa14.76□□□□□ -0.05
HMGB3-205ENST00000455596 SH3BGRL3Q9H299 93 aa14.76□□□□□ -0.05
HMGB3-205ENST00000455596 MRPL16Q9NX20 251 aaKnown RBP14.76□□□□□ -0.05
HMGB3-205ENST00000455596 TNFSF18Q9UNG2 199 aa14.76□□□□□ -0.05
HMGB3-205ENST00000455596 BORCS7-ASMTA0A0B4J1R7 106 aa14.75□□□□□ -0.05
HMGB3-205ENST00000455596 A0A1B0GVY2 172 aa14.75□□□□□ -0.05
HMGB3-205ENST00000455596 GNG5P63218 68 aa14.75□□□□□ -0.05
HMGB3-205ENST00000455596 FAM159AQ6UWV7 190 aa14.75□□□□□ -0.05
HMGB3-205ENST00000455596 ST6GAL2Q96JF0 529 aa14.75□□□□□ -0.05
HMGB3-205ENST00000455596 NBDYA0A0U1RRE5 68 aa14.74□□□□□ -0.05
HMGB3-205ENST00000455596 GCHFRP30047 84 aa14.74□□□□□ -0.05
HMGB3-205ENST00000455596 RPL7L1Q6DKI1 246 aaKnown RBP14.74□□□□□ -0.05
HMGB3-205ENST00000455596 SUN5Q8TC36 379 aa14.74□□□□□ -0.05
HMGB3-205ENST00000455596 ACTR3CQ9C0K3 210 aaPredicted RBP14.74□□□□□ -0.05
HMGB3-205ENST00000455596 TRGV11A0A075B6L2 103 aa14.73□□□□□ -0.05
HMGB3-205ENST00000455596 SERTM2A0A1B0GWG4 89 aa14.73□□□□□ -0.05
HMGB3-205ENST00000455596 CXorf1O96002 111 aa14.73□□□□□ -0.05
HMGB3-205ENST00000455596 TMEM183BQ1AE95 376 aa14.73□□□□□ -0.05
HMGB3-205ENST00000455596 TMEM183AQ8IXX5 376 aa14.73□□□□□ -0.05
HMGB3-205ENST00000455596 VSIG2Q96IQ7 327 aa14.73□□□□□ -0.05
HMGB3-205ENST00000455596 TRAV8-1A0A0A6YYK1 113 aa14.72□□□□□ -0.05
HMGB3-205ENST00000455596 C5orf17Q8NAS9 161 aa14.72□□□□□ -0.05
HMGB3-205ENST00000455596 TREM1Q9NP99 234 aa14.72□□□□□ -0.05
HMGB3-205ENST00000455596 TMEM167BQ9NRX6 74 aa14.72□□□□□ -0.05
HMGB3-205ENST00000455596 MDFICQ9P1T7 246 aa14.72□□□□□ -0.05
HMGB3-205ENST00000455596 NAGKQ9UJ70 344 aa14.72□□□□□ -0.05
HMGB3-205ENST00000455596 TRAV21A0A0B4J279 112 aa14.71□□□□□ -0.05
HMGB3-205ENST00000455596 F6UZH7 168 aa14.71□□□□□ -0.05
HMGB3-205ENST00000455596 IGHV3-53P01767 116 aa14.71□□□□□ -0.05
HMGB3-205ENST00000455596 ESRGQ1W209 222 aa14.71□□□□□ -0.05
HMGB3-205ENST00000455596 TVP23CQ96ET8 276 aa14.71□□□□□ -0.05
HMGB3-205ENST00000455596 SPXQ9BT56 116 aa14.71□□□□□ -0.05
HMGB3-205ENST00000455596 NDFIP1Q9BT67 221 aa14.71□□□□□ -0.05
HMGB3-205ENST00000455596 Q9H8V8 135 aa14.71□□□□□ -0.05
HMGB3-205ENST00000455596 A0A096LPF7 62 aa14.7□□□□□ -0.06
HMGB3-205ENST00000455596 K7EQM0 130 aa14.7□□□□□ -0.06
HMGB3-205ENST00000455596 PAX4O43316 350 aa14.7□□□□□ -0.06
HMGB3-205ENST00000455596 TCRAP04437 139 aa14.7□□□□□ -0.06
HMGB3-205ENST00000455596 TDRG1Q3Y452 100 aa14.7□□□□□ -0.06
HMGB3-205ENST00000455596 UPK3BQ9BT76 320 aa14.7□□□□□ -0.06
HMGB3-205ENST00000455596 G3V3Q6 166 aa14.69□□□□□ -0.06
HMGB3-205ENST00000455596 SUMO1P63165 101 aaKnown RBP14.69□□□□□ -0.06
HMGB3-205ENST00000455596 SLAQ13239 276 aa14.69□□□□□ -0.06
HMGB3-205ENST00000455596 SGK494Q96LW2 274 aa14.69□□□□□ -0.06
HMGB3-205ENST00000455596 PRO0255Q9UI72 69 aa14.69□□□□□ -0.06
HMGB3-205ENST00000455596 MRPS16Q9Y3D3 137 aaKnown RBP14.69□□□□□ -0.06
HMGB3-205ENST00000455596 IQCF2Q8IXL9 164 aa14.68□□□□□ -0.06
HMGB3-205ENST00000455596 C6orf223Q8N319 242 aa14.68□□□□□ -0.06
HMGB3-205ENST00000455596 ICOSQ9Y6W8 199 aa14.68□□□□□ -0.06
HMGB3-205ENST00000455596 TAAR5O14804 337 aa14.67□□□□□ -0.06
HMGB3-205ENST00000455596 ARPC5O15511 151 aa14.67□□□□□ -0.06
HMGB3-205ENST00000455596 RASL10AQ92737 203 aa14.67□□□□□ -0.06
HMGB3-205ENST00000455596 KCNS1Q96KK3 526 aa14.67□□□□□ -0.06
HMGB3-205ENST00000455596 SDF2L1Q9HCN8 221 aa14.67□□□□□ -0.06
HMGB3-205ENST00000455596 EPDR1Q9UM22 224 aa14.67□□□□□ -0.06
HMGB3-205ENST00000455596 HHLA3Q9XRX5 114 aa14.67□□□□□ -0.06
HMGB3-205ENST00000455596 TRGV4A0A0C4DH28 118 aa14.66□□□□□ -0.06
HMGB3-205ENST00000455596 CTXND1A0A1B0GTU2 59 aa14.66□□□□□ -0.06
HMGB3-205ENST00000455596 GGTLC3B5MD39 225 aa14.66□□□□□ -0.06
HMGB3-205ENST00000455596 GNRH2O43555 120 aa14.66□□□□□ -0.06
HMGB3-205ENST00000455596 CRYBA4P53673 196 aa14.66□□□□□ -0.06
HMGB3-205ENST00000455596 FHL2Q14192 279 aa14.66□□□□□ -0.06
HMGB3-205ENST00000455596 TTC32Q5I0X7 151 aa14.66□□□□□ -0.06
HMGB3-205ENST00000455596 AKR1C8PQ5T2L2 129 aa14.66□□□□□ -0.06
HMGB3-205ENST00000455596 PSG8Q9UQ74 426 aa14.66□□□□□ -0.06
HMGB3-205ENST00000455596 IGHV3-16A0A0C4DH30 117 aa14.65□□□□□ -0.06
HMGB3-205ENST00000455596 A0A1W2PRE2 83 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms