RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 CSTL1Q9H114 145 aa12.14□□□□□ -0.47
CCDC90B-202ENST00000455220 PGPEP1LA6NFU8 196 aa12.13□□□□□ -0.47
CCDC90B-202ENST00000455220 ADCYAP1P18509 176 aa12.13□□□□□ -0.47
CCDC90B-202ENST00000455220 APOC4P55056 127 aa12.13□□□□□ -0.47
CCDC90B-202ENST00000455220 FXYD7P58549 80 aa12.13□□□□□ -0.47
CCDC90B-202ENST00000455220 KIR3DS1Q14943 382 aa12.13□□□□□ -0.47
CCDC90B-202ENST00000455220 SMUG1Q53HV7 270 aa12.13□□□□□ -0.47
CCDC90B-202ENST00000455220 NHLRC2Q8NBF2 726 aa12.13□□□□□ -0.47
CCDC90B-202ENST00000455220 ZC2HC1AQ96GY0 325 aa12.13□□□□□ -0.47
CCDC90B-202ENST00000455220 TRAV12-2A0A075B6T6 113 aa12.13□□□□□ -0.47
CCDC90B-202ENST00000455220 GPX1P07203 203 aa12.13□□□□□ -0.47
CCDC90B-202ENST00000455220 FRMD6-AS1P0C7T7 363 aa12.13□□□□□ -0.47
CCDC90B-202ENST00000455220 GFI1BQ5VTD9 330 aa12.13□□□□□ -0.47
CCDC90B-202ENST00000455220 C1QTNF4Q9BXJ3 329 aa12.13□□□□□ -0.47
CCDC90B-202ENST00000455220 CA1P00915 261 aaPredicted RBP12.12□□□□□ -0.47
CCDC90B-202ENST00000455220 GCGP01275 180 aa12.12□□□□□ -0.47
CCDC90B-202ENST00000455220 ZNF80P51504 273 aaPredicted RBP12.12□□□□□ -0.47
CCDC90B-202ENST00000455220 TMEM241Q24JQ0 296 aa12.12□□□□□ -0.47
CCDC90B-202ENST00000455220 Q6AWC8 147 aa12.12□□□□□ -0.47
CCDC90B-202ENST00000455220 OCC1Q8TAD7 63 aa12.12□□□□□ -0.47
CCDC90B-202ENST00000455220 SEC11CQ9BY50 192 aa12.12□□□□□ -0.47
CCDC90B-202ENST00000455220 XCL2Q9UBD3 114 aa12.12□□□□□ -0.47
CCDC90B-202ENST00000455220 NAT8Q9UHE5 227 aa12.12□□□□□ -0.47
CCDC90B-202ENST00000455220 C7orf71A4D174 169 aa12.11□□□□□ -0.47
CCDC90B-202ENST00000455220 J3KRW8 73 aa12.11□□□□□ -0.47
CCDC90B-202ENST00000455220 BTN1A1Q13410 526 aa12.11□□□□□ -0.47
CCDC90B-202ENST00000455220 C10orf91Q5T1B1 145 aa12.11□□□□□ -0.47
CCDC90B-202ENST00000455220 LINC01551Q86U37 167 aa12.11□□□□□ -0.47
CCDC90B-202ENST00000455220 CSNK1G2-AS1Q8NCQ2 148 aa12.11□□□□□ -0.47
CCDC90B-202ENST00000455220 NIPSNAP3BQ9BS92 247 aa12.11□□□□□ -0.47
CCDC90B-202ENST00000455220 F8W036 122 aa12.1□□□□□ -0.47
CCDC90B-202ENST00000455220 K7EN84 100 aa12.1□□□□□ -0.47
CCDC90B-202ENST00000455220 UBE2CO00762 179 aa12.1□□□□□ -0.47
CCDC90B-202ENST00000455220 INSP01308 110 aa12.1□□□□□ -0.47
CCDC90B-202ENST00000455220 RNASE4P34096 147 aaKnown RBP12.1□□□□□ -0.47
CCDC90B-202ENST00000455220 CRIP1P50238 77 aa12.1□□□□□ -0.47
CCDC90B-202ENST00000455220 C20orf144Q9BQM9 153 aa12.1□□□□□ -0.47
CCDC90B-202ENST00000455220 SDF2L1Q9HCN8 221 aa12.1□□□□□ -0.47
CCDC90B-202ENST00000455220 ZNF324O75467 553 aaPredicted RBP12.09□□□□□ -0.47
CCDC90B-202ENST00000455220 PFN1P07737 140 aaKnown RBP12.09□□□□□ -0.47
CCDC90B-202ENST00000455220 RBMY1A1P0DJD3 496 aaKnown RBP12.09□□□□□ -0.47
CCDC90B-202ENST00000455220 RBMY1CP0DJD4 496 aa12.09□□□□□ -0.47
CCDC90B-202ENST00000455220 RBMY1FQ15415 496 aaKnown RBP12.09□□□□□ -0.47
CCDC90B-202ENST00000455220 BIN3Q9NQY0 253 aa12.09□□□□□ -0.47
CCDC90B-202ENST00000455220 TRAV12-3A0A0B4J271 114 aa12.09□□□□□ -0.47
CCDC90B-202ENST00000455220 MGST1P10620 155 aaKnown RBP12.09□□□□□ -0.47
CCDC90B-202ENST00000455220 RPL23P62829 140 aaKnown RBP12.09□□□□□ -0.47
CCDC90B-202ENST00000455220 FAM162BQ5T6X4 162 aa12.09□□□□□ -0.47
CCDC90B-202ENST00000455220 CARHSP1Q9Y2V2 147 aaKnown RBP12.09□□□□□ -0.47
CCDC90B-202ENST00000455220 DNAH9Q9NYC9 4486 aa12.08□□□□□ -0.48
CCDC90B-202ENST00000455220 TRAV21A0A0B4J279 112 aa12.08□□□□□ -0.48
CCDC90B-202ENST00000455220 KRBOX1C9JBD0 128 aa12.08□□□□□ -0.48
CCDC90B-202ENST00000455220 Q6ZQT7 251 aa12.08□□□□□ -0.48
CCDC90B-202ENST00000455220 C1orf158Q8N1D5 194 aa12.08□□□□□ -0.48
CCDC90B-202ENST00000455220 MEGF8Q7Z7M0 2845 aa12.07□□□□□ -0.48
CCDC90B-202ENST00000455220 C19orf71A6NCJ1 209 aa12.07□□□□□ -0.48
CCDC90B-202ENST00000455220 FABP5P3A8MUU1 101 aa12.07□□□□□ -0.48
CCDC90B-202ENST00000455220 PNRC1Q12796 327 aaPredicted RBP12.07□□□□□ -0.48
CCDC90B-202ENST00000455220 OR5I1Q13606 314 aa12.07□□□□□ -0.48
CCDC90B-202ENST00000455220 DEFB121Q5J5C9 76 aa12.07□□□□□ -0.48
CCDC90B-202ENST00000455220 PRR27Q6MZM9 219 aa12.07□□□□□ -0.48
CCDC90B-202ENST00000455220 Q6ZWC4 215 aa12.07□□□□□ -0.48
CCDC90B-202ENST00000455220 PRKDCP78527 4128 aaKnown RBP12.07□□□□□ -0.48
CCDC90B-202ENST00000455220 SH2D1AO60880 128 aa12.06□□□□□ -0.48
CCDC90B-202ENST00000455220 ZNF705AQ6ZN79 300 aaPredicted RBP12.06□□□□□ -0.48
CCDC90B-202ENST00000455220 TMEM256Q8N2U0 113 aa12.06□□□□□ -0.48
CCDC90B-202ENST00000455220 MRAPQ8TCY5 172 aa12.06□□□□□ -0.48
CCDC90B-202ENST00000455220 ISOC2Q96AB3 205 aa12.06□□□□□ -0.48
CCDC90B-202ENST00000455220 ADIRFQ15847 76 aa12.05□□□□□ -0.48
CCDC90B-202ENST00000455220 FAM231DQ6ZW35 169 aa12.05□□□□□ -0.48
CCDC90B-202ENST00000455220 C11orf21Q9P2W6 132 aa12.05□□□□□ -0.48
CCDC90B-202ENST00000455220 GOLT1BQ9Y3E0 138 aa12.05□□□□□ -0.48
CCDC90B-202ENST00000455220 H7BYZ3 331 aa12.05□□□□□ -0.48
CCDC90B-202ENST00000455220 DEFA6Q01524 100 aa12.05□□□□□ -0.48
CCDC90B-202ENST00000455220 DEFB135Q30KP9 77 aa12.05□□□□□ -0.48
CCDC90B-202ENST00000455220 LINC00467Q9BRT7 94 aa12.05□□□□□ -0.48
CCDC90B-202ENST00000455220 NBEAL2Q6ZNJ1 2754 aa12.04□□□□□ -0.48
CCDC90B-202ENST00000455220 HUWE1Q7Z6Z7 4374 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-202ENST00000455220 TDRG1Q3Y452 100 aa12.04□□□□□ -0.48
CCDC90B-202ENST00000455220 LINC01559Q495D7 138 aa12.04□□□□□ -0.48
CCDC90B-202ENST00000455220 SBSPONQ8IVN8 264 aa12.04□□□□□ -0.48
CCDC90B-202ENST00000455220 RNF183Q96D59 192 aa12.04□□□□□ -0.48
CCDC90B-202ENST00000455220 PYGO2Q9BRQ0 406 aa12.04□□□□□ -0.48
CCDC90B-202ENST00000455220 RNASE7Q9H1E1 156 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-202ENST00000455220 IBA57Q5T440 356 aaKnown RBP12.03□□□□□ -0.48
CCDC90B-202ENST00000455220 NUDT10Q8NFP7 164 aa12.03□□□□□ -0.48
CCDC90B-202ENST00000455220 DAZAP1Q96EP5 407 aaKnown RBP12.03□□□□□ -0.48
CCDC90B-202ENST00000455220 NUDT11Q96G61 164 aa12.03□□□□□ -0.48
CCDC90B-202ENST00000455220 RCHY1Q96PM5 261 aa12.03□□□□□ -0.48
CCDC90B-202ENST00000455220 TP53TG1Q9Y2A0 90 aa12.03□□□□□ -0.48
CCDC90B-202ENST00000455220 IGHV1OR15-1A0A075B7D0 117 aa12.02□□□□□ -0.49
CCDC90B-202ENST00000455220 IGKV3D-20A0A0C4DH25 116 aa12.02□□□□□ -0.49
CCDC90B-202ENST00000455220 SFRP2Q96HF1 295 aa12.02□□□□□ -0.49
CCDC90B-202ENST00000455220 LINC01587Q99440 93 aa12.02□□□□□ -0.49
CCDC90B-202ENST00000455220 TMEM208Q9BTX3 173 aa12.02□□□□□ -0.49
CCDC90B-202ENST00000455220 OSTCQ9NRP0 149 aa12.02□□□□□ -0.49
CCDC90B-202ENST00000455220 P01737 135 aa12.01□□□□□ -0.49
CCDC90B-202ENST00000455220 ERVFC1-1P60608 527 aa12.01□□□□□ -0.49
CCDC90B-202ENST00000455220 ANXA2RQ3ZCQ2 193 aa12.01□□□□□ -0.49
CCDC90B-202ENST00000455220 MUC21Q5SSG8 566 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms