RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 LOC102724200A0A096LPH7 203 aaPredicted RBP10.42□□□□□ -0.74
CLK3-203ENST00000454830 HAX1O00165 279 aa10.42□□□□□ -0.74
CLK3-203ENST00000454830 PSMB8P28062 276 aa10.42□□□□□ -0.74
CLK3-203ENST00000454830 DEFB136Q30KP8 78 aa10.42□□□□□ -0.74
CLK3-203ENST00000454830 Q6AWC8 147 aa10.42□□□□□ -0.74
CLK3-203ENST00000454830 PRDM13Q9H4Q3 707 aa10.42□□□□□ -0.74
CLK3-203ENST00000454830 YAE1D1Q9NRH1 226 aa10.42□□□□□ -0.74
CLK3-203ENST00000454830 RPS20P60866 119 aaKnown RBP10.41□□□□□ -0.74
CLK3-203ENST00000454830 FOXE3Q13461 319 aa10.41□□□□□ -0.74
CLK3-203ENST00000454830 AMN1Q8IY45 258 aa10.41□□□□□ -0.74
CLK3-203ENST00000454830 HIVEP2P31629 2446 aa10.41□□□□□ -0.74
CLK3-203ENST00000454830 PRSS3P2Q8NHM4 247 aa10.41□□□□□ -0.74
CLK3-203ENST00000454830 SMPXQ9UHP9 88 aa10.41□□□□□ -0.74
CLK3-203ENST00000454830 DUX3Q96PT4 197 aa10.4□□□□□ -0.74
CLK3-203ENST00000454830 PAM16Q9Y3D7 125 aa10.4□□□□□ -0.74
CLK3-203ENST00000454830 PKIAP61925 76 aa10.4□□□□□ -0.74
CLK3-203ENST00000454830 DPF1Q92782 380 aa10.4□□□□□ -0.74
CLK3-203ENST00000454830 UFC1Q9Y3C8 167 aa10.4□□□□□ -0.74
CLK3-203ENST00000454830 ZNF688P0C7X2 276 aa10.4□□□□□ -0.75
CLK3-203ENST00000454830 S100A4P26447 101 aaKnown RBP10.4□□□□□ -0.75
CLK3-203ENST00000454830 DEFA6Q01524 100 aa10.4□□□□□ -0.75
CLK3-203ENST00000454830 Q6ZQT7 251 aa10.4□□□□□ -0.75
CLK3-203ENST00000454830 ZNF702PQ9H963 129 aa10.39□□□□□ -0.75
CLK3-203ENST00000454830 MSRB1Q9NZV6 116 aa10.39□□□□□ -0.75
CLK3-203ENST00000454830 RNASE4P34096 147 aaKnown RBP10.39□□□□□ -0.75
CLK3-203ENST00000454830 CFHR3Q02985 330 aa10.39□□□□□ -0.75
CLK3-203ENST00000454830 ATOH7Q8N100 152 aa10.39□□□□□ -0.75
CLK3-203ENST00000454830 ZNF664Q8N3J9 261 aa10.39□□□□□ -0.75
CLK3-203ENST00000454830 ARL6IP6Q8N6S5 226 aa10.39□□□□□ -0.75
CLK3-203ENST00000454830 SMKR1H3BMG3 65 aa10.39□□□□□ -0.75
CLK3-203ENST00000454830 FA2HQ7L5A8 372 aa10.39□□□□□ -0.75
CLK3-203ENST00000454830 IGHV4OR15-8A0A075B7B6 117 aa10.38□□□□□ -0.75
CLK3-203ENST00000454830 A0A087WW49 117 aa10.38□□□□□ -0.75
CLK3-203ENST00000454830 RBAKDNA6NC62 111 aa10.38□□□□□ -0.75
CLK3-203ENST00000454830 NCR2O95944 276 aa10.38□□□□□ -0.75
CLK3-203ENST00000454830 ID1P41134 155 aa10.38□□□□□ -0.75
CLK3-203ENST00000454830 KLHDC1Q8N7A1 406 aa10.38□□□□□ -0.75
CLK3-203ENST00000454830 UNC79Q9P2D8 2635 aa10.38□□□□□ -0.75
CLK3-203ENST00000454830 D6R8Y8 96 aa10.38□□□□□ -0.75
CLK3-203ENST00000454830 SPRY2O43597 315 aa10.38□□□□□ -0.75
CLK3-203ENST00000454830 CKS2P33552 79 aa10.38□□□□□ -0.75
CLK3-203ENST00000454830 SPANXN1Q5VSR9 72 aa10.38□□□□□ -0.75
CLK3-203ENST00000454830 PRSS57Q6UWY2 283 aa10.38□□□□□ -0.75
CLK3-203ENST00000454830 RNF114Q9Y508 228 aa10.38□□□□□ -0.75
CLK3-203ENST00000454830 OVOL1O14753 267 aa10.37□□□□□ -0.75
CLK3-203ENST00000454830 PSMG4Q5JS54 123 aa10.37□□□□□ -0.75
CLK3-203ENST00000454830 VAMP8Q9BV40 100 aa10.37□□□□□ -0.75
CLK3-203ENST00000454830 A0A1W2PRX2 142 aa10.37□□□□□ -0.75
CLK3-203ENST00000454830 HOXD3P31249 432 aaPredicted RBP10.37□□□□□ -0.75
CLK3-203ENST00000454830 A0A1B0GW15 77 aa10.37□□□□□ -0.75
CLK3-203ENST00000454830 H3BVH4 76 aa10.37□□□□□ -0.75
CLK3-203ENST00000454830 ELANEP08246 267 aa10.37□□□□□ -0.75
CLK3-203ENST00000454830 LINC00614P0C842 121 aa10.37□□□□□ -0.75
CLK3-203ENST00000454830 ESDP10768 282 aa10.37□□□□□ -0.75
CLK3-203ENST00000454830 C18orf65Q6ZTR6 163 aa10.37□□□□□ -0.75
CLK3-203ENST00000454830 SMIM15Q7Z3B0 74 aa10.37□□□□□ -0.75
CLK3-203ENST00000454830 GPHB5Q86YW7 130 aa10.37□□□□□ -0.75
CLK3-203ENST00000454830 KRTAP1-3Q8IUG1 177 aa10.37□□□□□ -0.75
CLK3-203ENST00000454830 PRELID3AQ96N28 172 aa10.37□□□□□ -0.75
CLK3-203ENST00000454830 C3orf79P0CE67 100 aa10.36□□□□□ -0.75
CLK3-203ENST00000454830 DDTP30046 118 aa10.36□□□□□ -0.75
CLK3-203ENST00000454830 OR8A1Q8NGG7 326 aa10.36□□□□□ -0.75
CLK3-203ENST00000454830 MRPL53Q96EL3 112 aaKnown RBP10.36□□□□□ -0.75
CLK3-203ENST00000454830 PSMG3-AS1Q96PY0 264 aa10.36□□□□□ -0.75
CLK3-203ENST00000454830 FSHBP01225 129 aa10.36□□□□□ -0.75
CLK3-203ENST00000454830 LGALS1P09382 135 aaKnown RBP10.36□□□□□ -0.75
CLK3-203ENST00000454830 C9orf47Q6ZRZ4 202 aa10.36□□□□□ -0.75
CLK3-203ENST00000454830 LINC00477Q96M19 166 aa10.36□□□□□ -0.75
CLK3-203ENST00000454830 C11orf21Q9P2W6 132 aa10.36□□□□□ -0.75
CLK3-203ENST00000454830 NF1P21359 2839 aa10.35□□□□□ -0.75
CLK3-203ENST00000454830 SLURP1P55000 103 aa10.35□□□□□ -0.75
CLK3-203ENST00000454830 KLF5Q13887 457 aaPredicted RBP10.35□□□□□ -0.75
CLK3-203ENST00000454830 TDRG1Q3Y452 100 aa10.35□□□□□ -0.75
CLK3-203ENST00000454830 IGKV3D-20A0A0C4DH25 116 aa10.35□□□□□ -0.75
CLK3-203ENST00000454830 BRI3O95415 125 aa10.35□□□□□ -0.75
CLK3-203ENST00000454830 FXYD7P58549 80 aa10.35□□□□□ -0.75
CLK3-203ENST00000454830 KIR3DS1Q14943 382 aa10.35□□□□□ -0.75
CLK3-203ENST00000454830 M0R381 172 aa10.35□□□□□ -0.75
CLK3-203ENST00000454830 LEPROTL1O95214 131 aa10.35□□□□□ -0.75
CLK3-203ENST00000454830 PRR9Q5T870 116 aa10.35□□□□□ -0.75
CLK3-203ENST00000454830 ORMDL3Q8N138 153 aa10.35□□□□□ -0.75
CLK3-203ENST00000454830 OR10AG1Q8NH19 301 aa10.35□□□□□ -0.75
CLK3-203ENST00000454830 AGRNO00468 2067 aa10.34□□□□□ -0.75
CLK3-203ENST00000454830 FAM104BQ5XKR9 115 aa10.34□□□□□ -0.75
CLK3-203ENST00000454830 ZNF705AQ6ZN79 300 aaPredicted RBP10.34□□□□□ -0.75
CLK3-203ENST00000454830 AP5S1Q9NUS5 200 aa10.34□□□□□ -0.75
CLK3-203ENST00000454830 KLHL30-AS1Q8NEE0 82 aa10.34□□□□□ -0.75
CLK3-203ENST00000454830 MS4A6AQ9H2W1 248 aa10.34□□□□□ -0.75
CLK3-203ENST00000454830 SNRPD3P62318 126 aaKnown RBP10.34□□□□□ -0.75
CLK3-203ENST00000454830 MRPL51Q4U2R6 128 aaKnown RBP10.34□□□□□ -0.75
CLK3-203ENST00000454830 OR11H1Q8NG94 326 aa10.34□□□□□ -0.75
CLK3-203ENST00000454830 EVI2AP22794 236 aa10.33□□□□□ -0.76
CLK3-203ENST00000454830 UBE2E2Q96LR5 201 aa10.33□□□□□ -0.76
CLK3-203ENST00000454830 TRAV21A0A0B4J279 112 aa10.33□□□□□ -0.76
CLK3-203ENST00000454830 K7EMT4 169 aa10.33□□□□□ -0.76
CLK3-203ENST00000454830 LINC01559Q495D7 138 aa10.33□□□□□ -0.76
CLK3-203ENST00000454830 GCN1Q92616 2671 aaKnown RBP10.33□□□□□ -0.76
CLK3-203ENST00000454830 IFI27P40305 119 aaPredicted RBP10.33□□□□□ -0.76
CLK3-203ENST00000454830 MCRIP2Q9BUT9 160 aaKnown RBP10.33□□□□□ -0.76
CLK3-203ENST00000454830 IGLC6P0CF74 106 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms