RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 HSPB11Q9Y547 144 aa9□□□□□ -0.97
CHD3-206ENST00000452447 TRGV2A0A075B6R0 118 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 A0A0J9YY99 117 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 NBDYA0A0U1RRE5 68 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 ZNF324O75467 553 aaPredicted RBP8.99□□□□□ -0.97
CHD3-206ENST00000452447 CRISP2P16562 243 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 HOXA5P20719 270 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 FFAR4Q5NUL3 377 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 Q6ZTI0 123 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 RXFP4Q8TDU9 374 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 ZNF503Q96F45 646 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 LINC00467Q9BRT7 94 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 SMIM3Q9BZL3 60 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 TRGV1A0A0A0MS02 117 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 SMLR1H3BR10 107 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 TAS2R45P59539 299 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 RANP62826 216 aaKnown RBP8.99□□□□□ -0.97
CHD3-206ENST00000452447 ANXA2RQ3ZCQ2 193 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 PHYHIPLQ96FC7 376 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 TMPRSS5Q9H3S3 457 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 ZNF492Q9P255 531 aa8.99□□□□□ -0.97
CHD3-206ENST00000452447 BORCS7-ASMTA0A0B4J1R7 106 aa8.98□□□□□ -0.97
CHD3-206ENST00000452447 ZNF138P52744 262 aa8.98□□□□□ -0.97
CHD3-206ENST00000452447 UBE2L3P68036 154 aaKnown RBP8.98□□□□□ -0.97
CHD3-206ENST00000452447 KHDC3LQ587J8 217 aa8.98□□□□□ -0.97
CHD3-206ENST00000452447 LYPD1Q8N2G4 141 aa8.98□□□□□ -0.97
CHD3-206ENST00000452447 ZFAND2AQ8N6M9 145 aa8.98□□□□□ -0.97
CHD3-206ENST00000452447 C11orf72Q8NBR9 251 aa8.98□□□□□ -0.97
CHD3-206ENST00000452447 G3V3Q6 166 aa8.97□□□□□ -0.97
CHD3-206ENST00000452447 H3BNG1 76 aa8.97□□□□□ -0.97
CHD3-206ENST00000452447 MED14OSP0DP75 135 aa8.97□□□□□ -0.97
CHD3-206ENST00000452447 Q5BKY6 102 aa8.97□□□□□ -0.97
CHD3-206ENST00000452447 C18orf15Q96N68 181 aa8.97□□□□□ -0.97
CHD3-206ENST00000452447 Q9H3A6 140 aa8.97□□□□□ -0.97
CHD3-206ENST00000452447 Q9H8V8 135 aa8.97□□□□□ -0.97
CHD3-206ENST00000452447 IGHV1OR15-1A0A075B7D0 117 aa8.96□□□□□ -0.97
CHD3-206ENST00000452447 TRBV7-9A0A0J9YWB2 115 aa8.96□□□□□ -0.97
CHD3-206ENST00000452447 RBAKDNA6NC62 111 aa8.96□□□□□ -0.97
CHD3-206ENST00000452447 IBA57Q5T440 356 aaKnown RBP8.96□□□□□ -0.97
CHD3-206ENST00000452447 C6orf223Q8N319 242 aa8.96□□□□□ -0.97
CHD3-206ENST00000452447 KCNRGQ8N5I3 272 aa8.96□□□□□ -0.97
CHD3-206ENST00000452447 Q8TAT8 98 aa8.96□□□□□ -0.97
CHD3-206ENST00000452447 KLF12Q9Y4X4 402 aa8.96□□□□□ -0.97
CHD3-206ENST00000452447 PCLOQ9Y6V0 5065 aa8.96□□□□□ -0.98
CHD3-206ENST00000452447 RNF222A6NCQ9 220 aa8.95□□□□□ -0.98
CHD3-206ENST00000452447 SPINK4O60575 86 aa8.95□□□□□ -0.98
CHD3-206ENST00000452447 TCL1AP56279 114 aa8.95□□□□□ -0.98
CHD3-206ENST00000452447 PRR9Q5T870 116 aa8.95□□□□□ -0.98
CHD3-206ENST00000452447 OR11H4Q8NGC9 324 aa8.95□□□□□ -0.98
CHD3-206ENST00000452447 TP53TG3Q9ULZ0 132 aa8.95□□□□□ -0.98
CHD3-206ENST00000452447 A0A1W2PPV4 95 aa8.95□□□□□ -0.98
CHD3-206ENST00000452447 BCL2L11O43521 198 aa8.95□□□□□ -0.98
CHD3-206ENST00000452447 ESRGQ1W209 222 aa8.95□□□□□ -0.98
CHD3-206ENST00000452447 ACOT6Q3I5F7 207 aaPredicted RBP8.95□□□□□ -0.98
CHD3-206ENST00000452447 FAM74A1Q5RGS3 127 aa8.95□□□□□ -0.98
CHD3-206ENST00000452447 EIF5AL1Q6IS14 154 aaKnown RBP8.95□□□□□ -0.98
CHD3-206ENST00000452447 TMUB2Q71RG4 321 aa8.95□□□□□ -0.98
CHD3-206ENST00000452447 CMTM2Q8TAZ6 248 aa8.95□□□□□ -0.98
CHD3-206ENST00000452447 DIRC3C9JPN6 131 aa8.94□□□□□ -0.98
CHD3-206ENST00000452447 TTC32Q5I0X7 151 aa8.94□□□□□ -0.98
CHD3-206ENST00000452447 Q6ZQT7 251 aa8.94□□□□□ -0.98
CHD3-206ENST00000452447 EIF3GO75821 320 aaKnown RBP eCLIP8.93□□□□□ -0.98
CHD3-206ENST00000452447 TPT1P13693 172 aaKnown RBP8.93□□□□□ -0.98
CHD3-206ENST00000452447 TNP2Q05952 138 aa8.93□□□□□ -0.98
CHD3-206ENST00000452447 ZNF415Q09FC8 603 aa8.93□□□□□ -0.98
CHD3-206ENST00000452447 MUC21Q5SSG8 566 aa8.93□□□□□ -0.98
CHD3-206ENST00000452447 PQLC2Q6ZP29 291 aa8.93□□□□□ -0.98
CHD3-206ENST00000452447 C9orf62Q8N4C0 152 aa8.93□□□□□ -0.98
CHD3-206ENST00000452447 VSIG2Q96IQ7 327 aa8.93□□□□□ -0.98
CHD3-206ENST00000452447 UPK3BQ9BT76 320 aa8.93□□□□□ -0.98
CHD3-206ENST00000452447 ZNF471Q9BX82 626 aaPredicted RBP8.93□□□□□ -0.98
CHD3-206ENST00000452447 WFDC1Q9HC57 220 aa8.93□□□□□ -0.98
CHD3-206ENST00000452447 MRPL16Q9NX20 251 aaKnown RBP8.93□□□□□ -0.98
CHD3-206ENST00000452447 LENEPQ9Y5L5 61 aa8.93□□□□□ -0.98
CHD3-206ENST00000452447 RYR1P21817 5038 aa8.93□□□□□ -0.98
CHD3-206ENST00000452447 A0A096LPF7 62 aa8.92□□□□□ -0.98
CHD3-206ENST00000452447 PGPA6NDG6 321 aa8.92□□□□□ -0.98
CHD3-206ENST00000452447 IGHV3-53P01767 116 aa8.92□□□□□ -0.98
CHD3-206ENST00000452447 LGALSLQ3ZCW2 172 aaPredicted RBP8.92□□□□□ -0.98
CHD3-206ENST00000452447 FAM159AQ6UWV7 190 aa8.92□□□□□ -0.98
CHD3-206ENST00000452447 OTORQ9NRC9 128 aa8.92□□□□□ -0.98
CHD3-206ENST00000452447 RPH3ALQ9UNE2 315 aa8.92□□□□□ -0.98
CHD3-206ENST00000452447 MRPS16Q9Y3D3 137 aaKnown RBP8.92□□□□□ -0.98
CHD3-206ENST00000452447 PAX4O43316 350 aa8.91□□□□□ -0.98
CHD3-206ENST00000452447 RAB2AP61019 212 aa8.91□□□□□ -0.98
CHD3-206ENST00000452447 SLAQ13239 276 aa8.91□□□□□ -0.98
CHD3-206ENST00000452447 OR10G4Q8NGN3 311 aa8.91□□□□□ -0.98
CHD3-206ENST00000452447 OR10G9Q8NGN4 311 aa8.91□□□□□ -0.98
CHD3-206ENST00000452447 OR10G7Q8NGN6 311 aa8.91□□□□□ -0.98
CHD3-206ENST00000452447 TMED6Q8WW62 240 aa8.91□□□□□ -0.98
CHD3-206ENST00000452447 LRP1BQ9NZR2 4599 aa8.91□□□□□ -0.98
CHD3-206ENST00000452447 HMGB3O15347 200 aaKnown RBP8.9□□□□□ -0.98
CHD3-206ENST00000452447 NKX2-5P52952 324 aaPredicted RBP8.9□□□□□ -0.98
CHD3-206ENST00000452447 Q6AWC8 147 aa8.9□□□□□ -0.98
CHD3-206ENST00000452447 ZNF575Q86XF7 245 aa8.9□□□□□ -0.98
CHD3-206ENST00000452447 KRTAP17-1Q9BYP8 105 aa8.9□□□□□ -0.98
CHD3-206ENST00000452447 MDFICQ9P1T7 246 aa8.9□□□□□ -0.98
CHD3-206ENST00000452447 PRO0255Q9UI72 69 aa8.9□□□□□ -0.98
CHD3-206ENST00000452447 HHLA3Q9XRX5 114 aa8.9□□□□□ -0.98
CHD3-206ENST00000452447 ICOSQ9Y6W8 199 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms