RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 TRGC2P03986 189 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 SNRPCP09234 159 aaKnown RBP6.49□□□□□ -1.37
COL8A1-203ENST00000452013 NBEAP1P0C6P0 100 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 TRGC1P0CF51 173 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 PDE6HQ13956 83 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 GDF5OSQ5U4N7 250 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 SSX7Q7RTT5 188 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 HIST3H2BBQ8N257 126 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 RNF182Q8N6D2 247 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 MUC7Q8TAX7 377 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 C11orf52Q96A22 123 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 PAXXQ9BUH6 204 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 ZNF586Q9NXT0 402 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 URGCP-MRPS24S4R325 110 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 H3BTX0 84 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 PHOX2AO14813 284 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 PAGE4O60829 102 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 GCGP01275 180 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 GIG44P09565 113 aaPredicted RBP6.48□□□□□ -1.37
COL8A1-203ENST00000452013 PYYP10082 97 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 HLA-DMBP28068 263 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 CNN1P51911 297 aaKnown RBP6.48□□□□□ -1.37
COL8A1-203ENST00000452013 DEFB1P60022 68 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 PQLC2Q6ZP29 291 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 OR8A1Q8NGG7 326 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 OR10J6PQ8NGY7 276 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 BLNKQ8WV28 456 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 MRPL53Q96EL3 112 aaKnown RBP6.48□□□□□ -1.37
COL8A1-203ENST00000452013 FAM167A-AS1Q96KT0 104 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 SLC25A2Q9BXI2 301 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 AAMDCQ9H7C9 122 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 XCL2Q9UBD3 114 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 DNAH9Q9NYC9 4486 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 SORL1Q92673 2214 aa6.48□□□□□ -1.37
COL8A1-203ENST00000452013 A8MTW9 85 aa6.47□□□□□ -1.37
COL8A1-203ENST00000452013 OR7C2O60412 319 aa6.47□□□□□ -1.37
COL8A1-203ENST00000452013 MIFP14174 115 aa6.47□□□□□ -1.37
COL8A1-203ENST00000452013 FXYD7P58549 80 aa6.47□□□□□ -1.37
COL8A1-203ENST00000452013 HIST1H1AQ02539 215 aaPredicted RBP6.47□□□□□ -1.37
COL8A1-203ENST00000452013 LINC01551Q86U37 167 aa6.47□□□□□ -1.37
COL8A1-203ENST00000452013 LYPD1Q8N2G4 141 aa6.47□□□□□ -1.37
COL8A1-203ENST00000452013 CSNK1G2-AS1Q8NCQ2 148 aa6.47□□□□□ -1.37
COL8A1-203ENST00000452013 FRZBQ92765 325 aa6.47□□□□□ -1.37
COL8A1-203ENST00000452013 GOLT1BQ9Y3E0 138 aa6.47□□□□□ -1.37
COL8A1-203ENST00000452013 A0A0J9YWU9 116 aa6.46□□□□□ -1.38
COL8A1-203ENST00000452013 SMIM9A6NGZ8 99 aa6.46□□□□□ -1.38
COL8A1-203ENST00000452013 ZNF705FA8MVS1 300 aaPredicted RBP6.46□□□□□ -1.38
COL8A1-203ENST00000452013 TSTD3H0UI37 97 aa6.46□□□□□ -1.38
COL8A1-203ENST00000452013 SLC17A3O00476 420 aa6.46□□□□□ -1.38
COL8A1-203ENST00000452013 NDUFB4O95168 129 aa6.46□□□□□ -1.38
COL8A1-203ENST00000452013 OR10J4P0C629 311 aa6.46□□□□□ -1.38
COL8A1-203ENST00000452013 ZNF705DP0CH99 300 aaPredicted RBP6.46□□□□□ -1.38
COL8A1-203ENST00000452013 ZNF705BP0CI00 300 aaPredicted RBP6.46□□□□□ -1.38
COL8A1-203ENST00000452013 TSPOP30536 169 aa6.46□□□□□ -1.38
COL8A1-203ENST00000452013 CSN1S1P47710 185 aa6.46□□□□□ -1.38
COL8A1-203ENST00000452013 LBHQ53QV2 105 aaPredicted RBP6.46□□□□□ -1.38
COL8A1-203ENST00000452013 TMEM18Q96B42 140 aa6.46□□□□□ -1.38
COL8A1-203ENST00000452013 FXYD5Q96DB9 178 aa6.46□□□□□ -1.38
COL8A1-203ENST00000452013 SFRP2Q96HF1 295 aa6.46□□□□□ -1.38
COL8A1-203ENST00000452013 LINC00477Q96M19 166 aa6.46□□□□□ -1.38
COL8A1-203ENST00000452013 PACRGQ96M98 296 aaPredicted RBP6.46□□□□□ -1.38
COL8A1-203ENST00000452013 A0A1W2PRE2 83 aa6.45□□□□□ -1.38
COL8A1-203ENST00000452013 ARL14EPLP0DKL9 152 aa6.45□□□□□ -1.38
COL8A1-203ENST00000452013 GCHFRP30047 84 aa6.45□□□□□ -1.38
COL8A1-203ENST00000452013 PKIAP61925 76 aa6.45□□□□□ -1.38
COL8A1-203ENST00000452013 RANP62826 216 aaKnown RBP6.45□□□□□ -1.38
COL8A1-203ENST00000452013 UBE2L3P68036 154 aaKnown RBP6.45□□□□□ -1.38
COL8A1-203ENST00000452013 JOSD1Q15040 202 aaPredicted RBP6.45□□□□□ -1.38
COL8A1-203ENST00000452013 PYY3Q5JQD4 70 aa6.45□□□□□ -1.38
COL8A1-203ENST00000452013 CST9LP1Q5W188 147 aa6.45□□□□□ -1.38
COL8A1-203ENST00000452013 AMTNQ6UX39 209 aa6.45□□□□□ -1.38
COL8A1-203ENST00000452013 EXOC3-AS1Q8N2X6 119 aa6.45□□□□□ -1.38
COL8A1-203ENST00000452013 OR10D4PQ8NGN7 298 aa6.45□□□□□ -1.38
COL8A1-203ENST00000452013 IGF2BP2-AS1Q96M15 143 aa6.45□□□□□ -1.38
COL8A1-203ENST00000452013 NEU1Q99519 415 aa6.45□□□□□ -1.38
COL8A1-203ENST00000452013 TMEM208Q9BTX3 173 aa6.45□□□□□ -1.38
COL8A1-203ENST00000452013 IGHV3OR16-12A0A075B7B8 117 aa6.44□□□□□ -1.38
COL8A1-203ENST00000452013 IFITM10A6NMD0 228 aa6.44□□□□□ -1.38
COL8A1-203ENST00000452013 PRAC2D3DTV9 90 aa6.44□□□□□ -1.38
COL8A1-203ENST00000452013 MT-ND6P03923 174 aa6.44□□□□□ -1.38
COL8A1-203ENST00000452013 SPINK13Q1W4C9 94 aa6.44□□□□□ -1.38
COL8A1-203ENST00000452013 WDR73Q6P4I2 378 aa6.44□□□□□ -1.38
COL8A1-203ENST00000452013 ZNF705AQ6ZN79 300 aaPredicted RBP6.44□□□□□ -1.38
COL8A1-203ENST00000452013 OR10G8Q8NGN5 311 aa6.44□□□□□ -1.38
COL8A1-203ENST00000452013 SMIM12Q96EX1 92 aa6.44□□□□□ -1.38
COL8A1-203ENST00000452013 ZNF503Q96F45 646 aa6.44□□□□□ -1.38
COL8A1-203ENST00000452013 HIST1H2BLQ99880 126 aa6.44□□□□□ -1.38
COL8A1-203ENST00000452013 C11orf68Q9H3H3 251 aaKnown RBP6.44□□□□□ -1.38
COL8A1-203ENST00000452013 X6R8D5 127 aa6.44□□□□□ -1.38
COL8A1-203ENST00000452013 IGHV4-28A0A0C4DH34 117 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 A0A1W2PPQ1 181 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 XKRY2A2RUG3 117 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 TMEM189A5PLL7 270 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 PGPA6NDG6 321 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 NPIPB6E9PJ23 425 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 M0R2Z0 102 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 M0R3E3 92 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 INSP01308 110 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 LEPP41159 167 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 CDKN1BP46527 198 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms