RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 RPL35P42766 123 aaKnown RBP15.66■□□□□ 0.1
C9orf3-208ENST00000451893 C16orf92Q96LL3 132 aa15.66■□□□□ 0.1
C9orf3-208ENST00000451893 C17orf77Q96MU5 243 aa15.66■□□□□ 0.1
C9orf3-208ENST00000451893 ZNF331Q9NQX6 463 aaPredicted RBP15.66■□□□□ 0.1
C9orf3-208ENST00000451893 TCRAP04437 139 aa15.65■□□□□ 0.1
C9orf3-208ENST00000451893 FXYD7P58549 80 aa15.65■□□□□ 0.1
C9orf3-208ENST00000451893 TMEM183BQ1AE95 376 aa15.65■□□□□ 0.1
C9orf3-208ENST00000451893 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.65■□□□□ 0.1
C9orf3-208ENST00000451893 FOXI2Q6ZQN5 318 aa15.65■□□□□ 0.1
C9orf3-208ENST00000451893 MRPL53Q96EL3 112 aaKnown RBP15.65■□□□□ 0.1
C9orf3-208ENST00000451893 SMIM12Q96EX1 92 aa15.65■□□□□ 0.1
C9orf3-208ENST00000451893 EPPK1P58107 5090 aaKnown RBP15.64■□□□□ 0.09
C9orf3-208ENST00000451893 A0A087WWC5 75 aa15.64■□□□□ 0.09
C9orf3-208ENST00000451893 TRBV6-1A0A0K0K1D8 114 aa15.64■□□□□ 0.09
C9orf3-208ENST00000451893 H3BTX0 84 aa15.64■□□□□ 0.09
C9orf3-208ENST00000451893 SNRPCP09234 159 aaKnown RBP15.64■□□□□ 0.09
C9orf3-208ENST00000451893 Q6ZTC4 211 aa15.64■□□□□ 0.09
C9orf3-208ENST00000451893 CSNK1G2-AS1Q8NCQ2 148 aa15.64■□□□□ 0.09
C9orf3-208ENST00000451893 FMC1Q96HJ9 113 aa15.64■□□□□ 0.09
C9orf3-208ENST00000451893 SAV1Q9H4B6 383 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-208ENST00000451893 C7orf77A4D0Y5 90 aa15.63■□□□□ 0.09
C9orf3-208ENST00000451893 ISLRO14498 428 aa15.63■□□□□ 0.09
C9orf3-208ENST00000451893 GNG4P50150 75 aa15.63■□□□□ 0.09
C9orf3-208ENST00000451893 EXOC3-AS1Q8N2X6 119 aa15.63■□□□□ 0.09
C9orf3-208ENST00000451893 SLC17A3O00476 420 aa15.62■□□□□ 0.09
C9orf3-208ENST00000451893 EMP1P54849 157 aa15.62■□□□□ 0.09
C9orf3-208ENST00000451893 UBE2G1P62253 170 aa15.62■□□□□ 0.09
C9orf3-208ENST00000451893 RPL23P62829 140 aaKnown RBP15.62■□□□□ 0.09
C9orf3-208ENST00000451893 GDF5OSQ5U4N7 250 aa15.62■□□□□ 0.09
C9orf3-208ENST00000451893 ATRAIDQ6UW56 229 aa15.62■□□□□ 0.09
C9orf3-208ENST00000451893 DERL1Q9BUN8 251 aa15.62■□□□□ 0.09
C9orf3-208ENST00000451893 CTDSP1Q9GZU7 261 aa15.62■□□□□ 0.09
C9orf3-208ENST00000451893 TMEM242Q9NWH2 141 aa15.62■□□□□ 0.09
C9orf3-208ENST00000451893 DEFB1P60022 68 aa15.61■□□□□ 0.09
C9orf3-208ENST00000451893 LINC01551Q86U37 167 aa15.61■□□□□ 0.09
C9orf3-208ENST00000451893 RPS10P5Q9NQ39 176 aa15.61■□□□□ 0.09
C9orf3-208ENST00000451893 GOLT1BQ9Y3E0 138 aa15.61■□□□□ 0.09
C9orf3-208ENST00000451893 TMEM189A5PLL7 270 aa15.6■□□□□ 0.09
C9orf3-208ENST00000451893 DIRC3C9JPN6 131 aa15.6■□□□□ 0.09
C9orf3-208ENST00000451893 MT-ND4LP03901 98 aa15.6■□□□□ 0.09
C9orf3-208ENST00000451893 ADIRFQ15847 76 aa15.6■□□□□ 0.09
C9orf3-208ENST00000451893 TMEM75Q8N9X5 138 aa15.6■□□□□ 0.09
C9orf3-208ENST00000451893 BIN3Q9NQY0 253 aa15.6■□□□□ 0.09
C9orf3-208ENST00000451893 BIRC6Q9NR09 4857 aa15.6■□□□□ 0.09
C9orf3-208ENST00000451893 TRBV20OR9-2A0A075B6H5 130 aa15.59■□□□□ 0.09
C9orf3-208ENST00000451893 IGHV4-4A0A075B6R2 117 aa15.59■□□□□ 0.09
C9orf3-208ENST00000451893 DEFB131BA0A096LNP1 70 aa15.59■□□□□ 0.09
C9orf3-208ENST00000451893 GNG5P63218 68 aa15.59■□□□□ 0.09
C9orf3-208ENST00000451893 CENPWQ5EE01 88 aa15.59■□□□□ 0.09
C9orf3-208ENST00000451893 OCC1Q8TAD7 63 aa15.59■□□□□ 0.09
C9orf3-208ENST00000451893 ANAPC16Q96DE5 110 aa15.59■□□□□ 0.09
C9orf3-208ENST00000451893 TMEM208Q9BTX3 173 aa15.59■□□□□ 0.09
C9orf3-208ENST00000451893 SMCO4Q9NRQ5 59 aa15.59■□□□□ 0.09
C9orf3-208ENST00000451893 CELA1Q9UNI1 258 aa15.59■□□□□ 0.09
C9orf3-208ENST00000451893 RBAKDNA6NC62 111 aa15.58■□□□□ 0.08
C9orf3-208ENST00000451893 SMIM9A6NGZ8 99 aa15.58■□□□□ 0.08
C9orf3-208ENST00000451893 PPP1R2P9O14990 202 aa15.58■□□□□ 0.08
C9orf3-208ENST00000451893 BAGE2Q86Y30 109 aa15.58■□□□□ 0.08
C9orf3-208ENST00000451893 IGF2BP2-AS1Q96M15 143 aa15.58■□□□□ 0.08
C9orf3-208ENST00000451893 APLNQ9ULZ1 77 aa15.58■□□□□ 0.08
C9orf3-208ENST00000451893 ZFP30Q9Y2G7 519 aa15.58■□□□□ 0.08
C9orf3-208ENST00000451893 F6UB75 175 aa15.57■□□□□ 0.08
C9orf3-208ENST00000451893 SOCS3O14543 225 aa15.57■□□□□ 0.08
C9orf3-208ENST00000451893 SPART-AS1P0CW21 52 aa15.57■□□□□ 0.08
C9orf3-208ENST00000451893 GOLT1AQ6ZVE7 132 aa15.57■□□□□ 0.08
C9orf3-208ENST00000451893 TEX48A0A1B0GUV7 120 aa15.56■□□□□ 0.08
C9orf3-208ENST00000451893 PSG3Q16557 428 aa15.56■□□□□ 0.08
C9orf3-208ENST00000451893 ZNF705AQ6ZN79 300 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-208ENST00000451893 ISOC2Q96AB3 205 aa15.56■□□□□ 0.08
C9orf3-208ENST00000451893 LINC00479Q96M42 142 aa15.56■□□□□ 0.08
C9orf3-208ENST00000451893 NEU1Q99519 415 aa15.56■□□□□ 0.08
C9orf3-208ENST00000451893 RPH3ALQ9UNE2 315 aa15.56■□□□□ 0.08
C9orf3-208ENST00000451893 TRAV8-2A0A0B4J237 113 aa15.55■□□□□ 0.08
C9orf3-208ENST00000451893 A0A0J9YX75 114 aa15.55■□□□□ 0.08
C9orf3-208ENST00000451893 M0R3E3 92 aa15.55■□□□□ 0.08
C9orf3-208ENST00000451893 SCO1O75880 301 aa15.55■□□□□ 0.08
C9orf3-208ENST00000451893 GCGP01275 180 aa15.55■□□□□ 0.08
C9orf3-208ENST00000451893 LTAP01374 205 aa15.55■□□□□ 0.08
C9orf3-208ENST00000451893 FLI1Q01543 452 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-208ENST00000451893 C12orf74Q32Q52 190 aa15.55■□□□□ 0.08
C9orf3-208ENST00000451893 CLUHP3Q96NS8 147 aa15.55■□□□□ 0.08
C9orf3-208ENST00000451893 NDUFAF3Q9BU61 184 aa15.55■□□□□ 0.08
C9orf3-208ENST00000451893 PPP1R14DQ9NXH3 145 aa15.55■□□□□ 0.08
C9orf3-208ENST00000451893 TRAV34A0A0B4J273 112 aa15.54■□□□□ 0.08
C9orf3-208ENST00000451893 DUSP14O95147 198 aaKnown RBP15.54■□□□□ 0.08
C9orf3-208ENST00000451893 BTN1A1Q13410 526 aa15.54■□□□□ 0.08
C9orf3-208ENST00000451893 SAPCD1Q5SSQ6 148 aa15.54■□□□□ 0.08
C9orf3-208ENST00000451893 ZNF738Q8NE65 137 aa15.54■□□□□ 0.08
C9orf3-208ENST00000451893 PSG8Q9UQ74 426 aa15.54■□□□□ 0.08
C9orf3-208ENST00000451893 ZNF705FA8MVS1 300 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-208ENST00000451893 IGLV2-11P01706 119 aa15.53■□□□□ 0.08
C9orf3-208ENST00000451893 IGLV2-8P01709 118 aa15.53■□□□□ 0.08
C9orf3-208ENST00000451893 ZNF705DP0CH99 300 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-208ENST00000451893 ZNF705BP0CI00 300 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-208ENST00000451893 RNF212Q495C1 297 aa15.53■□□□□ 0.08
C9orf3-208ENST00000451893 TMEM183AQ8IXX5 376 aa15.53■□□□□ 0.08
C9orf3-208ENST00000451893 C20orf173Q96LM9 149 aa15.53■□□□□ 0.08
C9orf3-208ENST00000451893 MLST8Q9BVC4 326 aa15.53■□□□□ 0.08
C9orf3-208ENST00000451893 RRN3P1Q2M238 152 aa15.52■□□□□ 0.08
C9orf3-208ENST00000451893 SFRP2Q96HF1 295 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms