RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 USP9YO00507 2555 aaPredicted RBP9.39□□□□□ -0.91
COL27A1-202ENST00000451716 IGHV4-61A0A0C4DH41 118 aa9.39□□□□□ -0.91
COL27A1-202ENST00000451716 FOXA3P55318 350 aaPredicted RBP9.39□□□□□ -0.91
COL27A1-202ENST00000451716 OR10AG1Q8NH19 301 aa9.39□□□□□ -0.91
COL27A1-202ENST00000451716 SPCS1Q9Y6A9 102 aa9.39□□□□□ -0.91
COL27A1-202ENST00000451716 LRRK2Q5S007 2527 aa9.39□□□□□ -0.91
COL27A1-202ENST00000451716 IGHV3OR16-13A0A075B7E8 117 aa9.38□□□□□ -0.91
COL27A1-202ENST00000451716 IGHV3-74A0A0B4J1X5 117 aa9.38□□□□□ -0.91
COL27A1-202ENST00000451716 IGHV3-66A0A0C4DH42 116 aa9.38□□□□□ -0.91
COL27A1-202ENST00000451716 C9orf118A6NHY6 69 aa9.38□□□□□ -0.91
COL27A1-202ENST00000451716 BORCS7Q96B45 105 aa9.38□□□□□ -0.91
COL27A1-202ENST00000451716 KCNS1Q96KK3 526 aa9.38□□□□□ -0.91
COL27A1-202ENST00000451716 C8orf49Q96NF6 230 aa9.38□□□□□ -0.91
COL27A1-202ENST00000451716 ZNF492Q9P255 531 aa9.38□□□□□ -0.91
COL27A1-202ENST00000451716 A0A087X0K7 114 aa9.38□□□□□ -0.91
COL27A1-202ENST00000451716 A0A1B0GXF2 115 aa9.38□□□□□ -0.91
COL27A1-202ENST00000451716 WIPF1O43516 503 aa9.38□□□□□ -0.91
COL27A1-202ENST00000451716 HLA-DMBP28068 263 aa9.38□□□□□ -0.91
COL27A1-202ENST00000451716 FOXI2Q6ZQN5 318 aa9.38□□□□□ -0.91
COL27A1-202ENST00000451716 IGKV2-40A0A087WW87 121 aaPredicted RBP9.38□□□□□ -0.91
COL27A1-202ENST00000451716 IGKV2D-40P01614 121 aaPredicted RBP9.38□□□□□ -0.91
COL27A1-202ENST00000451716 CRIP1P50238 77 aa9.38□□□□□ -0.91
COL27A1-202ENST00000451716 HBBP68871 147 aa9.38□□□□□ -0.91
COL27A1-202ENST00000451716 C8orf86Q6ZUL3 223 aa9.38□□□□□ -0.91
COL27A1-202ENST00000451716 ZNF462Q96JM2 2506 aa9.37□□□□□ -0.91
COL27A1-202ENST00000451716 A0A087WX48 190 aa9.37□□□□□ -0.91
COL27A1-202ENST00000451716 RASL11AQ6T310 242 aa9.37□□□□□ -0.91
COL27A1-202ENST00000451716 AAMDCQ9H7C9 122 aa9.37□□□□□ -0.91
COL27A1-202ENST00000451716 ZNF324O75467 553 aaPredicted RBP9.37□□□□□ -0.91
COL27A1-202ENST00000451716 ANXA2RQ3ZCQ2 193 aa9.37□□□□□ -0.91
COL27A1-202ENST00000451716 ADAMTSL5Q6ZMM2 481 aa9.37□□□□□ -0.91
COL27A1-202ENST00000451716 RBPMS2Q6ZRY4 209 aaKnown RBP9.37□□□□□ -0.91
COL27A1-202ENST00000451716 FA2HQ7L5A8 372 aa9.37□□□□□ -0.91
COL27A1-202ENST00000451716 TMEM75Q8N9X5 138 aa9.37□□□□□ -0.91
COL27A1-202ENST00000451716 CCL19Q99731 98 aa9.37□□□□□ -0.91
COL27A1-202ENST00000451716 SMAD5-AS1Q9Y6J3 95 aa9.37□□□□□ -0.91
COL27A1-202ENST00000451716 CUBNO60494 3623 aa9.37□□□□□ -0.91
COL27A1-202ENST00000451716 IGHV3-49A0A0A0MS15 119 aa9.36□□□□□ -0.91
COL27A1-202ENST00000451716 TRAV40A0A0B4J280 105 aa9.36□□□□□ -0.91
COL27A1-202ENST00000451716 NPIPB6E9PJ23 425 aa9.36□□□□□ -0.91
COL27A1-202ENST00000451716 SLC25A34Q6PIV7 304 aa9.36□□□□□ -0.91
COL27A1-202ENST00000451716 CLEC19AQ6UXS0 136 aa9.36□□□□□ -0.91
COL27A1-202ENST00000451716 SPATA12Q7Z6I5 190 aa9.36□□□□□ -0.91
COL27A1-202ENST00000451716 FAM110DQ8TAY7 271 aaPredicted RBP9.36□□□□□ -0.91
COL27A1-202ENST00000451716 NRGNQ92686 78 aa9.36□□□□□ -0.91
COL27A1-202ENST00000451716 SPAG8Q99932 426 aaPredicted RBP9.36□□□□□ -0.91
COL27A1-202ENST00000451716 RABAC1Q9UI14 185 aa9.36□□□□□ -0.91
COL27A1-202ENST00000451716 TMSB15BA0A087X1C1 80 aa9.36□□□□□ -0.91
COL27A1-202ENST00000451716 A0A0G2JLM5 398 aa9.36□□□□□ -0.91
COL27A1-202ENST00000451716 RNASEKQ6P5S7 137 aaKnown RBP9.36□□□□□ -0.91
COL27A1-202ENST00000451716 ATP5L2Q7Z4Y8 100 aa9.36□□□□□ -0.91
COL27A1-202ENST00000451716 LYPD1Q8N2G4 141 aa9.36□□□□□ -0.91
COL27A1-202ENST00000451716 Q8TAT8 98 aa9.36□□□□□ -0.91
COL27A1-202ENST00000451716 ZNF502Q8TBZ5 544 aa9.36□□□□□ -0.91
COL27A1-202ENST00000451716 ZANQ9Y493 2812 aa9.36□□□□□ -0.91
COL27A1-202ENST00000451716 SRSF1Q07955 248 aaKnown RBP eCLIP9.35□□□□□ -0.912e-9■□□□□ 9.4
COL27A1-202ENST00000451716 CT83Q5H943 113 aa9.35□□□□□ -0.91
COL27A1-202ENST00000451716 CCDC140Q96MF4 163 aa9.35□□□□□ -0.91
COL27A1-202ENST00000451716 ARMS2P0C7Q2 107 aa9.34□□□□□ -0.91
COL27A1-202ENST00000451716 IGHV4-38-2P0DP08 117 aa9.34□□□□□ -0.91
COL27A1-202ENST00000451716 RPL7P18124 248 aaKnown RBP9.34□□□□□ -0.91
COL27A1-202ENST00000451716 C5orf56Q8N8D9 126 aa9.34□□□□□ -0.91
COL27A1-202ENST00000451716 CYSLTR1Q9Y271 337 aa9.34□□□□□ -0.91
COL27A1-202ENST00000451716 IGHV4-30-2A0A087WSY4 118 aa9.34□□□□□ -0.91
COL27A1-202ENST00000451716 HSBP1O75506 76 aa9.34□□□□□ -0.91
COL27A1-202ENST00000451716 MT-ATP8P03928 68 aa9.34□□□□□ -0.91
COL27A1-202ENST00000451716 PAX8Q06710 450 aa9.34□□□□□ -0.91
COL27A1-202ENST00000451716 LY6EQ16553 131 aa9.34□□□□□ -0.91
COL27A1-202ENST00000451716 VGLL1Q99990 258 aa9.34□□□□□ -0.91
COL27A1-202ENST00000451716 APOHP02749 345 aaPredicted RBP9.34□□□□□ -0.92
COL27A1-202ENST00000451716 CSN1S1P47710 185 aa9.34□□□□□ -0.92
COL27A1-202ENST00000451716 PDE6HQ13956 83 aa9.34□□□□□ -0.92
COL27A1-202ENST00000451716 URB1-AS1Q96HZ7 61 aa9.34□□□□□ -0.92
COL27A1-202ENST00000451716 GFRA4Q9GZZ7 299 aa9.34□□□□□ -0.92
COL27A1-202ENST00000451716 H3BRM9 83 aa9.33□□□□□ -0.92
COL27A1-202ENST00000451716 CHEK1O14757 476 aa9.33□□□□□ -0.92
COL27A1-202ENST00000451716 IGHG4P01861 327 aa9.33□□□□□ -0.92
COL27A1-202ENST00000451716 ZNF138P52744 262 aa9.33□□□□□ -0.92
COL27A1-202ENST00000451716 RNF182Q8N6D2 247 aa9.33□□□□□ -0.92
COL27A1-202ENST00000451716 PIFOQ8TCI5 191 aa9.33□□□□□ -0.92
COL27A1-202ENST00000451716 RAB37Q96AX2 223 aa9.33□□□□□ -0.92
COL27A1-202ENST00000451716 SPANXB1Q9NS25 103 aaPredicted RBP9.33□□□□□ -0.92
COL27A1-202ENST00000451716 CHD6Q8TD26 2715 aa9.33□□□□□ -0.92
COL27A1-202ENST00000451716 IGHV1-69DA0A0B4J2H0 117 aa9.33□□□□□ -0.92
COL27A1-202ENST00000451716 IGHV1-69P01742 117 aa9.33□□□□□ -0.92
COL27A1-202ENST00000451716 PRB1P04280 392 aa9.33□□□□□ -0.92
COL27A1-202ENST00000451716 A0A1W2PPM0 123 aa9.32□□□□□ -0.92
COL27A1-202ENST00000451716 FABP5P3A8MUU1 101 aa9.32□□□□□ -0.92
COL27A1-202ENST00000451716 SEC11AP67812 179 aa9.32□□□□□ -0.92
COL27A1-202ENST00000451716 C10orf105Q8TEF2 133 aa9.32□□□□□ -0.92
COL27A1-202ENST00000451716 ZFAND3Q9H8U3 227 aa9.32□□□□□ -0.92
COL27A1-202ENST00000451716 ABCA12Q86UK0 2595 aa9.32□□□□□ -0.92
COL27A1-202ENST00000451716 FBN2P35556 2912 aa9.32□□□□□ -0.92
COL27A1-202ENST00000451716 TRBV6-1A0A0K0K1D8 114 aa9.32□□□□□ -0.92
COL27A1-202ENST00000451716 M0R2Z0 102 aa9.32□□□□□ -0.92
COL27A1-202ENST00000451716 CT45A10P0DMU9 189 aa9.32□□□□□ -0.92
COL27A1-202ENST00000451716 KLF5Q13887 457 aaPredicted RBP9.32□□□□□ -0.92
COL27A1-202ENST00000451716 GAGE12JA6NER3 117 aa9.31□□□□□ -0.92
COL27A1-202ENST00000451716 PRAC2D3DTV9 90 aa9.31□□□□□ -0.92
COL27A1-202ENST00000451716 CCDC179H3BU77 68 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms