RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, human

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGCE-208	ENST00000450385	CMTM2	Q8TAZ6	248 aa		11.18	□□□□□ -0.62
SGCE-208	ENST00000450385	AQP10	Q96PS8	301 aa		11.18	□□□□□ -0.62
SGCE-208	ENST00000450385	ARPC5L	Q9BPX5	153 aa		11.18	□□□□□ -0.62
SGCE-208	ENST00000450385	PSMG3	Q9BT73	122 aa	Predicted RBP	11.18	□□□□□ -0.62
SGCE-208	ENST00000450385	UPK3B	Q9BT76	320 aa		11.18	□□□□□ -0.62
SGCE-208	ENST00000450385	NBDY	A0A0U1RRE5	68 aa		11.17	□□□□□ -0.62
SGCE-208	ENST00000450385	SERTM2	A0A1B0GWG4	89 aa		11.17	□□□□□ -0.62
SGCE-208	ENST00000450385		Q6AWC8	147 aa		11.17	□□□□□ -0.62
SGCE-208	ENST00000450385		Q6ZTI0	123 aa		11.17	□□□□□ -0.62
SGCE-208	ENST00000450385	SSX7	Q7RTT5	188 aa		11.17	□□□□□ -0.62
SGCE-208	ENST00000450385	SMIM3	Q9BZL3	60 aa		11.17	□□□□□ -0.62
SGCE-208	ENST00000450385	WFDC1	Q9HC57	220 aa		11.17	□□□□□ -0.62
SGCE-208	ENST00000450385	LINC00588	Q9Y4M8	146 aa		11.17	□□□□□ -0.62
SGCE-208	ENST00000450385	KLF12	Q9Y4X4	402 aa		11.17	□□□□□ -0.62
SGCE-208	ENST00000450385	TRGV1	A0A0A0MS02	117 aa		11.16	□□□□□ -0.62
SGCE-208	ENST00000450385		A0A1W2PPQ1	181 aa		11.16	□□□□□ -0.62
SGCE-208	ENST00000450385	PGP	A6NDG6	321 aa		11.16	□□□□□ -0.62
SGCE-208	ENST00000450385	ZNF415	Q09FC8	603 aa		11.16	□□□□□ -0.62
SGCE-208	ENST00000450385	TTC32	Q5I0X7	151 aa		11.16	□□□□□ -0.62
SGCE-208	ENST00000450385	OR10G4	Q8NGN3	311 aa		11.16	□□□□□ -0.62
SGCE-208	ENST00000450385	OR10G9	Q8NGN4	311 aa		11.16	□□□□□ -0.62
SGCE-208	ENST00000450385	OR10G7	Q8NGN6	311 aa		11.16	□□□□□ -0.62
SGCE-208	ENST00000450385	ST6GAL2	Q96JF0	529 aa		11.16	□□□□□ -0.62
SGCE-208	ENST00000450385	SPX	Q9BT56	116 aa		11.16	□□□□□ -0.62
SGCE-208	ENST00000450385		Q9H8V8	135 aa		11.16	□□□□□ -0.62
SGCE-208	ENST00000450385	GIP	P09681	153 aa	Predicted RBP	11.15	□□□□□ -0.62
SGCE-208	ENST00000450385	HOXA5	P20719	270 aa		11.15	□□□□□ -0.62
SGCE-208	ENST00000450385	TDRG1	Q3Y452	100 aa		11.15	□□□□□ -0.62
SGCE-208	ENST00000450385	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.15	□□□□□ -0.62
SGCE-208	ENST00000450385	TMPRSS5	Q9H3S3	457 aa		11.15	□□□□□ -0.62
SGCE-208	ENST00000450385	PKD1	P98161	4303 aa		11.14	□□□□□ -0.63
SGCE-208	ENST00000450385	FAM159A	Q6UWV7	190 aa		11.14	□□□□□ -0.63
SGCE-208	ENST00000450385	IQCF2	Q8IXL9	164 aa		11.14	□□□□□ -0.63
SGCE-208	ENST00000450385	SUN5	Q8TC36	379 aa		11.14	□□□□□ -0.63
SGCE-208	ENST00000450385	PRO0255	Q9UI72	69 aa		11.14	□□□□□ -0.63
SGCE-208	ENST00000450385	TRGV11	A0A075B6L2	103 aa		11.13	□□□□□ -0.63
SGCE-208	ENST00000450385	FBLL1	A6NHQ2	334 aa	Known RBP	11.13	□□□□□ -0.63
SGCE-208	ENST00000450385	STAG3L2	P0CL84	134 aa		11.13	□□□□□ -0.63
SGCE-208	ENST00000450385	STAG3L3	P0CL85	134 aa		11.13	□□□□□ -0.63
SGCE-208	ENST00000450385	MED14OS	P0DP75	135 aa		11.13	□□□□□ -0.63
SGCE-208	ENST00000450385	C6orf223	Q8N319	242 aa		11.13	□□□□□ -0.63
SGCE-208	ENST00000450385	RASL10A	Q92737	203 aa		11.13	□□□□□ -0.63
SGCE-208	ENST00000450385	TNFSF18	Q9UNG2	199 aa		11.13	□□□□□ -0.63
SGCE-208	ENST00000450385	MRPS16	Q9Y3D3	137 aa	Known RBP	11.13	□□□□□ -0.63
SGCE-208	ENST00000450385		K7EQM0	130 aa		11.12	□□□□□ -0.63
SGCE-208	ENST00000450385	CDC34	P49427	236 aa	Predicted RBP	11.12	□□□□□ -0.63
SGCE-208	ENST00000450385	PRR9	Q5T870	116 aa		11.12	□□□□□ -0.63
SGCE-208	ENST00000450385	HYLS1	Q96M11	299 aa		11.12	□□□□□ -0.63
SGCE-208	ENST00000450385	TMEM167B	Q9NRX6	74 aa		11.12	□□□□□ -0.63
SGCE-208	ENST00000450385	TRAV21	A0A0B4J279	112 aa		11.11	□□□□□ -0.63
SGCE-208	ENST00000450385		A0A0J9YY99	117 aa		11.11	□□□□□ -0.63
SGCE-208	ENST00000450385	PAX4	O43316	350 aa		11.11	□□□□□ -0.63
SGCE-208	ENST00000450385	RAB2A	P61019	212 aa		11.11	□□□□□ -0.63
SGCE-208	ENST00000450385	ESRG	Q1W209	222 aa		11.11	□□□□□ -0.63
SGCE-208	ENST00000450385		Q8TAT8	98 aa		11.11	□□□□□ -0.63
SGCE-208	ENST00000450385	VSIG2	Q96IQ7	327 aa		11.11	□□□□□ -0.63
SGCE-208	ENST00000450385	KCNS1	Q96KK3	526 aa		11.11	□□□□□ -0.63
SGCE-208	ENST00000450385	HHLA3	Q9XRX5	114 aa		11.11	□□□□□ -0.63
SGCE-208	ENST00000450385		A0A096LPF7	62 aa		11.1	□□□□□ -0.63
SGCE-208	ENST00000450385	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.1	□□□□□ -0.63
SGCE-208	ENST00000450385	CXorf1	O96002	111 aa		11.1	□□□□□ -0.63
SGCE-208	ENST00000450385	ATP6V0C	P27449	155 aa		11.1	□□□□□ -0.63
SGCE-208	ENST00000450385	C5orf17	Q8NAS9	161 aa		11.1	□□□□□ -0.63
SGCE-208	ENST00000450385	RAB24	Q969Q5	203 aa		11.1	□□□□□ -0.63
SGCE-208	ENST00000450385	NDFIP1	Q9BT67	221 aa		11.1	□□□□□ -0.63
SGCE-208	ENST00000450385	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.1	□□□□□ -0.63
SGCE-208	ENST00000450385	ICOS	Q9Y6W8	199 aa		11.1	□□□□□ -0.63
SGCE-208	ENST00000450385		K7EP13	123 aa		11.09	□□□□□ -0.63
SGCE-208	ENST00000450385	CIDEA	O60543	219 aa		11.09	□□□□□ -0.63
SGCE-208	ENST00000450385	ARL14EPL	P0DKL9	152 aa		11.09	□□□□□ -0.63
SGCE-208	ENST00000450385	MRPL23	Q16540	153 aa	Known RBP	11.09	□□□□□ -0.63
SGCE-208	ENST00000450385	GOLT1A	Q6ZVE7	132 aa		11.09	□□□□□ -0.63
SGCE-208	ENST00000450385	HSD17B11	Q8NBQ5	300 aa		11.09	□□□□□ -0.63
SGCE-208	ENST00000450385	NKX6-2	Q9C056	277 aa	Predicted RBP	11.09	□□□□□ -0.63
SGCE-208	ENST00000450385	TREM1	Q9NP99	234 aa		11.09	□□□□□ -0.63
SGCE-208	ENST00000450385	TAAR5	O14804	337 aa		11.08	□□□□□ -0.64
SGCE-208	ENST00000450385	GCHFR	P30047	84 aa		11.08	□□□□□ -0.64
SGCE-208	ENST00000450385	CRYBA4	P53673	196 aa		11.08	□□□□□ -0.64
SGCE-208	ENST00000450385	LCE2D	Q5TA82	110 aa	Predicted RBP	11.08	□□□□□ -0.64
SGCE-208	ENST00000450385		A0A1W2PRE2	83 aa		11.07	□□□□□ -0.64
SGCE-208	ENST00000450385		M0R2P5	195 aa		11.07	□□□□□ -0.64
SGCE-208	ENST00000450385	ORM1	P02763	201 aa		11.07	□□□□□ -0.64
SGCE-208	ENST00000450385	FHL2	Q14192	279 aa		11.07	□□□□□ -0.64
SGCE-208	ENST00000450385	TMEM183B	Q1AE95	376 aa		11.07	□□□□□ -0.64
SGCE-208	ENST00000450385	RGS21	Q2M5E4	152 aa		11.07	□□□□□ -0.64
SGCE-208	ENST00000450385	SH2D6	Q7Z4S9	175 aa		11.07	□□□□□ -0.64
SGCE-208	ENST00000450385	TMEM183A	Q8IXX5	376 aa		11.07	□□□□□ -0.64
SGCE-208	ENST00000450385	MDFIC	Q9P1T7	246 aa		11.07	□□□□□ -0.64
SGCE-208	ENST00000450385	TRGV4	A0A0C4DH28	118 aa		11.06	□□□□□ -0.64
SGCE-208	ENST00000450385	TCRA	P04437	139 aa		11.06	□□□□□ -0.64
SGCE-208	ENST00000450385	MUC21	Q5SSG8	566 aa		11.06	□□□□□ -0.64
SGCE-208	ENST00000450385	SAPCD1	Q5SSQ6	148 aa		11.06	□□□□□ -0.64
SGCE-208	ENST00000450385		Q6ZQT7	251 aa		11.06	□□□□□ -0.64
SGCE-208	ENST00000450385	SDF2L1	Q9HCN8	221 aa		11.06	□□□□□ -0.64
SGCE-208	ENST00000450385	MRPL16	Q9NX20	251 aa	Known RBP	11.06	□□□□□ -0.64
SGCE-208	ENST00000450385	EPDR1	Q9UM22	224 aa		11.06	□□□□□ -0.64
SGCE-208	ENST00000450385	TRAV4	A0A0B4J268	109 aa		11.05	□□□□□ -0.64
SGCE-208	ENST00000450385	SIVA1	O15304	175 aa		11.05	□□□□□ -0.64
SGCE-208	ENST00000450385	NEGR1	Q7Z3B1	354 aa		11.05	□□□□□ -0.64
SGCE-208	ENST00000450385	TMEM75	Q8N9X5	138 aa		11.05	□□□□□ -0.64

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