RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 IGF2-ASQ6U949 168 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 C1orf159Q96HA4 380 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 SONP18583 2426 aaKnown RBP8.22□□□□□ -1.09
CTC1-202ENST00000449476 ADAMTS9Q9P2N4 1935 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.22□□□□□ -1.09
CTC1-202ENST00000449476 M0R2P5 195 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 HLA-DMBP28068 263 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 NPC2P61916 151 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 MORN5Q5VZ52 161 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 C10orf126Q8N4M7 172 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 GAGE12BA1L429 117 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 KNCNA6PVL3 124 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 ESDP10768 282 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 ANXA2RQ3ZCQ2 193 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 PHLDA1Q8WV24 401 aaPredicted RBP8.22□□□□□ -1.09
CTC1-202ENST00000449476 IGFBPL1Q8WX77 278 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 RPL35AP18077 110 aaKnown RBP8.22□□□□□ -1.09
CTC1-202ENST00000449476 MSMPQ1L6U9 139 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 SP5Q6BEB4 398 aaPredicted RBP8.22□□□□□ -1.09
CTC1-202ENST00000449476 PATE2Q6UY27 113 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 TP53TG1Q9Y2A0 90 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 MYO18BQ8IUG5 2567 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 CHD3Q12873 2000 aaKnown RBP8.21□□□□□ -1.09
CTC1-202ENST00000449476 TRAV26-2A0A0B4J265 109 aa8.21□□□□□ -1.09
CTC1-202ENST00000449476 PRADC1Q9BSG0 188 aa8.21□□□□□ -1.09
CTC1-202ENST00000449476 KMT2EQ8IZD2 1858 aa8.21□□□□□ -1.09
CTC1-202ENST00000449476 IGKV1-17P01599 117 aa8.21□□□□□ -1.1
CTC1-202ENST00000449476 TRPT1Q86TN4 253 aaKnown RBP8.21□□□□□ -1.1
CTC1-202ENST00000449476 DTX2Q86UW9 622 aa8.21□□□□□ -1.1
CTC1-202ENST00000449476 OR11H6Q8NGC7 330 aa8.21□□□□□ -1.1
CTC1-202ENST00000449476 TMEM131Q92545 1883 aa8.21□□□□□ -1.1
CTC1-202ENST00000449476 PIEZO2Q9H5I5 2752 aa8.21□□□□□ -1.1
CTC1-202ENST00000449476 LINC00158P58513 81 aa8.21□□□□□ -1.1
CTC1-202ENST00000449476 SIGMAR1Q99720 223 aa8.21□□□□□ -1.1
CTC1-202ENST00000449476 SPXQ9BT56 116 aa8.21□□□□□ -1.1
CTC1-202ENST00000449476 PGPEP1Q9NXJ5 209 aa8.21□□□□□ -1.1
CTC1-202ENST00000449476 LGALS9BQ3B8N2 356 aa8.21□□□□□ -1.1
CTC1-202ENST00000449476 LGALS9CQ6DKI2 356 aa8.21□□□□□ -1.1
CTC1-202ENST00000449476 RITA1Q96K30 269 aa8.21□□□□□ -1.1
CTC1-202ENST00000449476 TMEM95Q3KNT9 176 aa8.2□□□□□ -1.1
CTC1-202ENST00000449476 LY6G5BQ8NDX9 201 aa8.2□□□□□ -1.1
CTC1-202ENST00000449476 C11orf1Q9H5F2 150 aa8.2□□□□□ -1.1
CTC1-202ENST00000449476 KLK9Q9UKQ9 250 aa8.2□□□□□ -1.1
CTC1-202ENST00000449476 TCF15Q12870 199 aa8.2□□□□□ -1.1
CTC1-202ENST00000449476 Q6ZPA2 131 aa8.2□□□□□ -1.1
CTC1-202ENST00000449476 WIPF2Q8TF74 440 aaPredicted RBP8.2□□□□□ -1.1
CTC1-202ENST00000449476 A0A087WX48 190 aa8.2□□□□□ -1.1
CTC1-202ENST00000449476 CRIP3Q6Q6R5 217 aa8.2□□□□□ -1.1
CTC1-202ENST00000449476 TRAV13-1A0A0B4J241 112 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 SDHAF1A6NFY7 115 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 K7EIM0 57 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 DLX4Q92988 240 aaPredicted RBP8.19□□□□□ -1.1
CTC1-202ENST00000449476 TIMM21Q9BVV7 248 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 AGPAT4-IT1Q9H0P7 198 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 IGKV1OR2-108A0A075B7D4 117 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 COX8AP10176 69 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 EGR2P11161 476 aaPredicted RBP8.19□□□□□ -1.1
CTC1-202ENST00000449476 GP9P14770 177 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 DYNAPQ8N1N2 210 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 C1QTNF4Q9BXJ3 329 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 XCL2Q9UBD3 114 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 PIEZO1Q92508 2521 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 I3L2K1 104 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 HOXB4P17483 251 aaPredicted RBP8.19□□□□□ -1.1
CTC1-202ENST00000449476 TCTEX1D4Q5JR98 221 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 TMEM86BQ8N661 226 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 RASL10AQ92737 203 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 SMIM2Q9BVW6 85 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 TRAV12-2A0A075B6T6 113 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 IGHV1OR15-1A0A075B7D0 117 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 NUPR1O60356 82 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 FAM167A-AS1Q96KT0 104 aa8.19□□□□□ -1.1
CTC1-202ENST00000449476 Q5PR19 223 aa8.18□□□□□ -1.1
CTC1-202ENST00000449476 MRPL35Q9NZE8 188 aaKnown RBP8.18□□□□□ -1.1
CTC1-202ENST00000449476 NCKAP5O14513 1909 aa8.18□□□□□ -1.1
CTC1-202ENST00000449476 CDKN1BP46527 198 aa8.18□□□□□ -1.1
CTC1-202ENST00000449476 ATXN8Q156A1 80 aa8.18□□□□□ -1.1
CTC1-202ENST00000449476 MAJINQ3KP22 176 aa8.18□□□□□ -1.1
CTC1-202ENST00000449476 ODF3L1Q8IXM7 274 aa8.18□□□□□ -1.1
CTC1-202ENST00000449476 DPH3Q96FX2 82 aa8.18□□□□□ -1.1
CTC1-202ENST00000449476 RHODO00212 210 aa8.18□□□□□ -1.1
CTC1-202ENST00000449476 IGHV7-4-1A0A0J9YVY3 117 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 CENPVL3A0A0U1RRI6 287 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 PMVKQ15126 192 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 NEGR1Q7Z3B1 354 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 IGHV7-81A0A0B4J1V7 117 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 PROP1O75360 226 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 KLF5Q13887 457 aaPredicted RBP8.17□□□□□ -1.1
CTC1-202ENST00000449476 CR1LQ2VPA4 569 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 ZNF747Q9BV97 191 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 PLXNB1O43157 2135 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 E7EUB6 86 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 NPSP0C0P6 89 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 MYMXA0A1B0GTQ4 84 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 F6UB75 175 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 PAX4O43316 350 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 IGLV1-47P01700 117 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 PRIMA1Q86XR5 153 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 NCOR2Q9Y618 2525 aa8.17□□□□□ -1.1
CTC1-202ENST00000449476 IGF2RP11717 2491 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms