RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 PRR9Q5T870 116 aa9.41□□□□□ -0.9
HLA-DRB9-201ENST00000449413 FAM231DQ6ZW35 169 aa9.41□□□□□ -0.9
HLA-DRB9-201ENST00000449413 C15orf54Q8N8G6 183 aa9.41□□□□□ -0.9
HLA-DRB9-201ENST00000449413 ANAPC16Q96DE5 110 aa9.41□□□□□ -0.9
HLA-DRB9-201ENST00000449413 RNASE7Q9H1E1 156 aaKnown RBP9.41□□□□□ -0.9
HLA-DRB9-201ENST00000449413 OSTCQ9NRP0 149 aa9.41□□□□□ -0.9
HLA-DRB9-201ENST00000449413 DNAH3Q8TD57 4116 aa9.41□□□□□ -0.9
HLA-DRB9-201ENST00000449413 C19orf71A6NCJ1 209 aa9.4□□□□□ -0.9
HLA-DRB9-201ENST00000449413 H7BYZ3 331 aa9.4□□□□□ -0.9
HLA-DRB9-201ENST00000449413 PPP1R2P9O14990 202 aa9.4□□□□□ -0.9
HLA-DRB9-201ENST00000449413 CRISP2P16562 243 aa9.4□□□□□ -0.9
HLA-DRB9-201ENST00000449413 LEPP41159 167 aa9.4□□□□□ -0.9
HLA-DRB9-201ENST00000449413 FAM162BQ5T6X4 162 aa9.4□□□□□ -0.9
HLA-DRB9-201ENST00000449413 LINC00322Q6ZN03 302 aaPredicted RBP9.4□□□□□ -0.9
HLA-DRB9-201ENST00000449413 GTSCR1Q86UQ5 136 aa9.4□□□□□ -0.9
HLA-DRB9-201ENST00000449413 ZFAND2AQ8N6M9 145 aa9.4□□□□□ -0.9
HLA-DRB9-201ENST00000449413 OR4B1Q8NGF8 309 aa9.4□□□□□ -0.9
HLA-DRB9-201ENST00000449413 OR10G8Q8NGN5 311 aa9.4□□□□□ -0.9
HLA-DRB9-201ENST00000449413 CTDSP1Q9GZU7 261 aa9.4□□□□□ -0.9
HLA-DRB9-201ENST00000449413 WFDC10AQ9H1F0 79 aa9.4□□□□□ -0.9
HLA-DRB9-201ENST00000449413 RBMY1BA6NDE4 496 aaKnown RBP9.39□□□□□ -0.91
HLA-DRB9-201ENST00000449413 RBMY1EA6NEQ0 496 aaKnown RBP9.39□□□□□ -0.91
HLA-DRB9-201ENST00000449413 H3BMM0 161 aa9.39□□□□□ -0.91
HLA-DRB9-201ENST00000449413 SH2D1AO60880 128 aa9.39□□□□□ -0.91
HLA-DRB9-201ENST00000449413 IGKV3-20P01619 116 aa9.39□□□□□ -0.91
HLA-DRB9-201ENST00000449413 P01737 135 aa9.39□□□□□ -0.91
HLA-DRB9-201ENST00000449413 RBMY1DP0C7P1 496 aaKnown RBP9.39□□□□□ -0.91
HLA-DRB9-201ENST00000449413 ZNF80P51504 273 aaPredicted RBP9.39□□□□□ -0.91
HLA-DRB9-201ENST00000449413 KPRPQ5T749 579 aaPredicted RBP9.39□□□□□ -0.91
HLA-DRB9-201ENST00000449413 AMTNQ6UX39 209 aa9.39□□□□□ -0.91
HLA-DRB9-201ENST00000449413 CBLN2Q8IUK8 224 aa9.39□□□□□ -0.91
HLA-DRB9-201ENST00000449413 C19orf73Q9NVV2 129 aa9.39□□□□□ -0.91
HLA-DRB9-201ENST00000449413 V9GYV3 84 aa9.39□□□□□ -0.91
HLA-DRB9-201ENST00000449413 AGRNO00468 2067 aa9.39□□□□□ -0.91
HLA-DRB9-201ENST00000449413 COL7A1Q02388 2944 aa9.38□□□□□ -0.91
HLA-DRB9-201ENST00000449413 ZNF705GA8MUZ8 300 aaPredicted RBP9.38□□□□□ -0.91
HLA-DRB9-201ENST00000449413 KLLNB2CW77 178 aa9.38□□□□□ -0.91
HLA-DRB9-201ENST00000449413 J3KRW8 73 aa9.38□□□□□ -0.91
HLA-DRB9-201ENST00000449413 GATCO43716 136 aaKnown RBP9.38□□□□□ -0.91
HLA-DRB9-201ENST00000449413 PFN1P07737 140 aaKnown RBP9.38□□□□□ -0.91
HLA-DRB9-201ENST00000449413 CRIP1P50238 77 aa9.38□□□□□ -0.91
HLA-DRB9-201ENST00000449413 BTN1A1Q13410 526 aa9.38□□□□□ -0.91
HLA-DRB9-201ENST00000449413 TRPT1Q86TN4 253 aaKnown RBP9.38□□□□□ -0.91
HLA-DRB9-201ENST00000449413 STHQ8IWL8 128 aa9.38□□□□□ -0.91
HLA-DRB9-201ENST00000449413 NUDT10Q8NFP7 164 aa9.38□□□□□ -0.91
HLA-DRB9-201ENST00000449413 DAZAP1Q96EP5 407 aaKnown RBP9.38□□□□□ -0.91
HLA-DRB9-201ENST00000449413 NUDT11Q96G61 164 aa9.38□□□□□ -0.91
HLA-DRB9-201ENST00000449413 RPP21Q9H633 154 aaKnown RBP9.38□□□□□ -0.91
HLA-DRB9-201ENST00000449413 TMEM242Q9NWH2 141 aa9.38□□□□□ -0.91
HLA-DRB9-201ENST00000449413 M0R2Z0 102 aa9.37□□□□□ -0.91
HLA-DRB9-201ENST00000449413 GPX1P07203 203 aa9.37□□□□□ -0.91
HLA-DRB9-201ENST00000449413 TSPOP30536 169 aa9.37□□□□□ -0.91
HLA-DRB9-201ENST00000449413 CDKN1BP46527 198 aa9.37□□□□□ -0.91
HLA-DRB9-201ENST00000449413 SPINK13Q1W4C9 94 aa9.37□□□□□ -0.91
HLA-DRB9-201ENST00000449413 CT83Q5H943 113 aa9.37□□□□□ -0.91
HLA-DRB9-201ENST00000449413 Q6AWC8 147 aa9.37□□□□□ -0.91
HLA-DRB9-201ENST00000449413 TMEM88Q6PEY1 159 aa9.37□□□□□ -0.91
HLA-DRB9-201ENST00000449413 CLUHP3Q96NS8 147 aa9.37□□□□□ -0.91
HLA-DRB9-201ENST00000449413 NOTCH3Q9UM47 2321 aa9.37□□□□□ -0.91
HLA-DRB9-201ENST00000449413 C7orf71A4D174 169 aa9.36□□□□□ -0.91
HLA-DRB9-201ENST00000449413 KIR3DS1Q14943 382 aa9.36□□□□□ -0.91
HLA-DRB9-201ENST00000449413 OXLD1Q5BKU9 147 aa9.36□□□□□ -0.91
HLA-DRB9-201ENST00000449413 GFI1BQ5VTD9 330 aa9.36□□□□□ -0.91
HLA-DRB9-201ENST00000449413 SMCO4Q9NRQ5 59 aa9.36□□□□□ -0.91
HLA-DRB9-201ENST00000449413 BIRC6Q9NR09 4857 aa9.36□□□□□ -0.91
HLA-DRB9-201ENST00000449413 TRAV21A0A0B4J279 112 aa9.35□□□□□ -0.91
HLA-DRB9-201ENST00000449413 CXorf65A6NEN9 183 aa9.35□□□□□ -0.91
HLA-DRB9-201ENST00000449413 FABP5P3A8MUU1 101 aa9.35□□□□□ -0.91
HLA-DRB9-201ENST00000449413 G3V4G9 280 aa9.35□□□□□ -0.91
HLA-DRB9-201ENST00000449413 CA1P00915 261 aaPredicted RBP9.35□□□□□ -0.91
HLA-DRB9-201ENST00000449413 RNASE4P34096 147 aaKnown RBP9.35□□□□□ -0.91
HLA-DRB9-201ENST00000449413 RPL19P84098 196 aaKnown RBP9.35□□□□□ -0.91
HLA-DRB9-201ENST00000449413 EGFEM1PQ0D2K5 195 aa9.35□□□□□ -0.91
HLA-DRB9-201ENST00000449413 LINC01559Q495D7 138 aa9.35□□□□□ -0.91
HLA-DRB9-201ENST00000449413 OR2D3Q8NGH3 330 aa9.35□□□□□ -0.91
HLA-DRB9-201ENST00000449413 MRAPQ8TCY5 172 aa9.35□□□□□ -0.91
HLA-DRB9-201ENST00000449413 IL36BQ9NZH7 164 aa9.35□□□□□ -0.91
HLA-DRB9-201ENST00000449413 TRAV12-2A0A075B6T6 113 aa9.34□□□□□ -0.91
HLA-DRB9-201ENST00000449413 TMEM189A5PLL7 270 aa9.34□□□□□ -0.91
HLA-DRB9-201ENST00000449413 PRB2P02812 416 aaPredicted RBP9.34□□□□□ -0.91
HLA-DRB9-201ENST00000449413 FXYD7P58549 80 aa9.34□□□□□ -0.91
HLA-DRB9-201ENST00000449413 SAMD5Q5TGI4 173 aa9.34□□□□□ -0.91
HLA-DRB9-201ENST00000449413 KCNIP4Q6PIL6 250 aa9.34□□□□□ -0.91
HLA-DRB9-201ENST00000449413 DEFB125Q8N687 156 aa9.34□□□□□ -0.91
HLA-DRB9-201ENST00000449413 IMMP2LQ96T52 175 aa9.34□□□□□ -0.91
HLA-DRB9-201ENST00000449413 URGCP-MRPS24S4R325 110 aa9.34□□□□□ -0.91
HLA-DRB9-201ENST00000449413 SORL1Q92673 2214 aa9.33□□□□□ -0.92
HLA-DRB9-201ENST00000449413 INSP01308 110 aa9.33□□□□□ -0.92
HLA-DRB9-201ENST00000449413 AMBPP02760 352 aa9.33□□□□□ -0.92
HLA-DRB9-201ENST00000449413 S100PP25815 95 aa9.33□□□□□ -0.92
HLA-DRB9-201ENST00000449413 Q6ZQT7 251 aa9.33□□□□□ -0.92
HLA-DRB9-201ENST00000449413 TSKUQ8WUA8 353 aa9.33□□□□□ -0.92
HLA-DRB9-201ENST00000449413 TUBA4BQ9H853 241 aa9.33□□□□□ -0.92
HLA-DRB9-201ENST00000449413 SRD5A3Q9H8P0 318 aa9.33□□□□□ -0.92
HLA-DRB9-201ENST00000449413 C11orf21Q9P2W6 132 aa9.33□□□□□ -0.92
HLA-DRB9-201ENST00000449413 NAGKQ9UJ70 344 aa9.33□□□□□ -0.92
HLA-DRB9-201ENST00000449413 TMSB15BA0A087X1C1 80 aa9.32□□□□□ -0.92
HLA-DRB9-201ENST00000449413 TRAV12-3A0A0B4J271 114 aa9.32□□□□□ -0.92
HLA-DRB9-201ENST00000449413 A0A1W2PPQ1 181 aa9.32□□□□□ -0.92
HLA-DRB9-201ENST00000449413 SMIM27A0A1W2PRY6 76 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms