RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 TMEM78Q5T7P6 136 aa10.39□□□□□ -0.75
SHMT2-203ENST00000449049 Q86TA4 180 aa10.39□□□□□ -0.75
SHMT2-203ENST00000449049 SGK494Q96LW2 274 aa10.39□□□□□ -0.75
SHMT2-203ENST00000449049 CLUHP3Q96NS8 147 aa10.39□□□□□ -0.75
SHMT2-203ENST00000449049 ZNF492Q9P255 531 aa10.39□□□□□ -0.75
SHMT2-203ENST00000449049 PSG8Q9UQ74 426 aa10.39□□□□□ -0.75
SHMT2-203ENST00000449049 CXorf65A6NEN9 183 aa10.38□□□□□ -0.75
SHMT2-203ENST00000449049 ZNF138P52744 262 aa10.38□□□□□ -0.75
SHMT2-203ENST00000449049 CEBPGP53567 150 aa10.38□□□□□ -0.75
SHMT2-203ENST00000449049 UBE2G1P62253 170 aa10.38□□□□□ -0.75
SHMT2-203ENST00000449049 ELOBQ15370 118 aa10.38□□□□□ -0.75
SHMT2-203ENST00000449049 OR10D4PQ8NGN7 298 aa10.38□□□□□ -0.75
SHMT2-203ENST00000449049 IGF2BP2-AS1Q96M15 143 aa10.38□□□□□ -0.75
SHMT2-203ENST00000449049 TMEM238LA0A1B0GVL6 79 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 ZNF674Q2M3X9 581 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 TRPT1Q86TN4 253 aaKnown RBP10.37□□□□□ -0.75
SHMT2-203ENST00000449049 DEFB125Q8N687 156 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 Q8TAT8 98 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 ODF3Q96PU9 254 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 HIST1H2BKO60814 126 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 LTAP01374 205 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 HIST1H2BJP06899 126 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 CT45A10P0DMU9 189 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 HIST1H2BOP23527 126 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 HIST1H2BBP33778 126 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 HIST1H2BDP58876 126 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 PKIAP61925 76 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 HIST1H2BCP62807 126 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 HIST2H2BEQ16778 126 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-203ENST00000449049 AMTNQ6UX39 209 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 PRNTQ86SH4 94 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 STHQ8IWL8 128 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 HIST1H2BHQ93079 126 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 FAM19A4Q96LR4 140 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 HIST1H2BNQ99877 126 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 HIST1H2BMQ99879 126 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 LENEPQ9Y5L5 61 aa10.37□□□□□ -0.75
SHMT2-203ENST00000449049 TRBV20OR9-2A0A075B6H5 130 aa10.36□□□□□ -0.75
SHMT2-203ENST00000449049 ZNF727A8MUV8 499 aa10.36□□□□□ -0.75
SHMT2-203ENST00000449049 C9JCJ5 164 aa10.36□□□□□ -0.75
SHMT2-203ENST00000449049 CXCL1P09341 107 aa10.36□□□□□ -0.75
SHMT2-203ENST00000449049 HIST3H2BBQ8N257 126 aa10.36□□□□□ -0.75
SHMT2-203ENST00000449049 OR4B1Q8NGF8 309 aa10.36□□□□□ -0.75
SHMT2-203ENST00000449049 SMIM7Q9BQ49 75 aa10.36□□□□□ -0.75
SHMT2-203ENST00000449049 DNHD1Q96M86 4753 aa10.36□□□□□ -0.75
SHMT2-203ENST00000449049 TRBV7-9A0A0J9YWB2 115 aa10.36□□□□□ -0.75
SHMT2-203ENST00000449049 RBMY1BA6NDE4 496 aaKnown RBP10.36□□□□□ -0.75
SHMT2-203ENST00000449049 RBMY1EA6NEQ0 496 aaKnown RBP10.36□□□□□ -0.75
SHMT2-203ENST00000449049 TSTD3H0UI37 97 aa10.36□□□□□ -0.75
SHMT2-203ENST00000449049 RBMY1DP0C7P1 496 aaKnown RBP10.36□□□□□ -0.75
SHMT2-203ENST00000449049 CENPWQ5EE01 88 aa10.36□□□□□ -0.75
SHMT2-203ENST00000449049 TVP23CQ96ET8 276 aa10.36□□□□□ -0.75
SHMT2-203ENST00000449049 PPP1R2P9O14990 202 aa10.35□□□□□ -0.75
SHMT2-203ENST00000449049 IGKV3-20P01619 116 aa10.35□□□□□ -0.75
SHMT2-203ENST00000449049 GNG4P50150 75 aa10.35□□□□□ -0.75
SHMT2-203ENST00000449049 SAPCD1Q5SSQ6 148 aa10.35□□□□□ -0.75
SHMT2-203ENST00000449049 ASCL2Q99929 193 aa10.35□□□□□ -0.75
SHMT2-203ENST00000449049 SRD5A3Q9H8P0 318 aa10.35□□□□□ -0.75
SHMT2-203ENST00000449049 ZFP30Q9Y2G7 519 aa10.35□□□□□ -0.75
SHMT2-203ENST00000449049 G0S2P27469 103 aa10.34□□□□□ -0.75
SHMT2-203ENST00000449049 BAGE2Q86Y30 109 aa10.34□□□□□ -0.75
SHMT2-203ENST00000449049 SMIM12Q96EX1 92 aa10.34□□□□□ -0.75
SHMT2-203ENST00000449049 NDFIP1Q9BT67 221 aa10.34□□□□□ -0.75
SHMT2-203ENST00000449049 MLST8Q9BVC4 326 aa10.34□□□□□ -0.75
SHMT2-203ENST00000449049 IGLV2-8P01709 118 aa10.34□□□□□ -0.75
SHMT2-203ENST00000449049 CRISP2P16562 243 aa10.34□□□□□ -0.75
SHMT2-203ENST00000449049 COX8CQ7Z4L0 72 aa10.34□□□□□ -0.75
SHMT2-203ENST00000449049 TMEM183AQ8IXX5 376 aa10.34□□□□□ -0.75
SHMT2-203ENST00000449049 TGIF2-C20orf24A0A0A6YYL0 155 aa10.33□□□□□ -0.76
SHMT2-203ENST00000449049 GFI1BQ5VTD9 330 aa10.33□□□□□ -0.76
SHMT2-203ENST00000449049 C8orf49Q96NF6 230 aa10.33□□□□□ -0.76
SHMT2-203ENST00000449049 LY96Q9Y6Y9 160 aa10.33□□□□□ -0.76
SHMT2-203ENST00000449049 PRSS47A8MTI9 375 aa10.33□□□□□ -0.76
SHMT2-203ENST00000449049 A8MZ25 164 aa10.33□□□□□ -0.76
SHMT2-203ENST00000449049 TRGC2P03986 189 aa10.33□□□□□ -0.76
SHMT2-203ENST00000449049 LEPP41159 167 aa10.33□□□□□ -0.76
SHMT2-203ENST00000449049 ZFAND2AQ8N6M9 145 aa10.33□□□□□ -0.76
SHMT2-203ENST00000449049 PGPEP1LA6NFU8 196 aa10.32□□□□□ -0.76
SHMT2-203ENST00000449049 KLLNB2CW77 178 aa10.32□□□□□ -0.76
SHMT2-203ENST00000449049 IGHV4-30-4P0DP06 118 aa10.32□□□□□ -0.76
SHMT2-203ENST00000449049 AURKAIP1Q9NWT8 199 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-203ENST00000449049 NAT8Q9UHE5 227 aa10.32□□□□□ -0.76
SHMT2-203ENST00000449049 PKD1L1Q8TDX9 2849 aa10.32□□□□□ -0.76
SHMT2-203ENST00000449049 B4DEV8 164 aa10.31□□□□□ -0.76
SHMT2-203ENST00000449049 TSPOP30536 169 aa10.31□□□□□ -0.76
SHMT2-203ENST00000449049 CDKN1BP46527 198 aa10.31□□□□□ -0.76
SHMT2-203ENST00000449049 SPINK13Q1W4C9 94 aa10.31□□□□□ -0.76
SHMT2-203ENST00000449049 TMEM241Q24JQ0 296 aa10.31□□□□□ -0.76
SHMT2-203ENST00000449049 NHLRC2Q8NBF2 726 aa10.31□□□□□ -0.76
SHMT2-203ENST00000449049 OCC1Q8TAD7 63 aa10.31□□□□□ -0.76
SHMT2-203ENST00000449049 NIPSNAP3BQ9BS92 247 aa10.31□□□□□ -0.76
SHMT2-203ENST00000449049 SORL1Q92673 2214 aa10.31□□□□□ -0.76
SHMT2-203ENST00000449049 M0R2Z0 102 aa10.31□□□□□ -0.76
SHMT2-203ENST00000449049 TRGC1P0CF51 173 aa10.31□□□□□ -0.76
SHMT2-203ENST00000449049 RPL35AP18077 110 aaKnown RBP10.31□□□□□ -0.76
SHMT2-203ENST00000449049 PRR9Q5T870 116 aa10.31□□□□□ -0.76
SHMT2-203ENST00000449049 MORN3Q6PF18 240 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-203ENST00000449049 LINC01551Q86U37 167 aa10.31□□□□□ -0.76
SHMT2-203ENST00000449049 ZC2HC1AQ96GY0 325 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms