RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 PFN1P07737 140 aaKnown RBP3.82□□□□□ -1.8
USP49-205ENST00000448078 CXCL3P19876 107 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 GATA2P23769 480 aaPredicted RBP3.82□□□□□ -1.8
USP49-205ENST00000448078 CRYBA4P53673 196 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 RIGQ13278 110 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 AARDQ4LEZ3 155 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 RNASE10Q5GAN6 216 aaKnown RBP3.82□□□□□ -1.8
USP49-205ENST00000448078 OR10J3Q5JRS4 329 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 UBE2NLQ5JXB2 153 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 Q6ZRU5 148 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 Q6ZSA8 131 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 EIF4E3Q8N5X7 224 aaKnown RBP3.82□□□□□ -1.8
USP49-205ENST00000448078 DTD1Q8TEA8 209 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 DPH3Q96FX2 82 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 TP53RKQ96S44 253 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 SLC50A1Q9BRV3 221 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 CHCHD5Q9BSY4 110 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 TMEM222Q9H0R3 208 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 HIGD1AQ9Y241 93 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 TRAV8-1A0A0A6YYK1 113 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 MPDU1O75352 247 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 MED6O75586 246 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 IGHV3-53P01767 116 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 OR5G3P0C626 314 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 CXCL2P19875 107 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 CCR6P51684 374 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 SELENOTP62341 195 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 LCN15Q6UWW0 184 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 SCXQ7RTU7 201 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 WFDC10BQ8IUB3 73 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 IQCF2Q8IXL9 164 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 Q8N377 158 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 SAMD12Q8N8I0 201 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 NHLRC2Q8NBF2 726 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 OR5H6Q8NGV6 325 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 TERB2Q8NHR7 220 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 GPX8Q8TED1 209 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 C15orf40Q8WUR7 153 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 CIB3Q96Q77 187 aaPredicted RBP3.81□□□□□ -1.8
USP49-205ENST00000448078 PXMP4Q9Y6I8 212 aa3.81□□□□□ -1.8
USP49-205ENST00000448078 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.8□□□□□ -1.8
USP49-205ENST00000448078 TRAV8-2A0A0B4J237 113 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 LOC100506127A0A0U1RQW1 187 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 GGTLC3B5MD39 225 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 K7EQD1 137 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 SPINK4O60575 86 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 GPX1P07203 203 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 ANXA3P12429 323 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 TBPP20226 339 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 AKR1C1Q04828 323 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 CD300CQ08708 224 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 LAGE3Q14657 143 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 SCGB2B2Q4G0G5 96 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 LINC01556Q5JQF7 62 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 IBA57Q5T440 356 aaKnown RBP3.8□□□□□ -1.8
USP49-205ENST00000448078 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 BPIFA4PQ86YQ2 179 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 OR51S1Q8NGJ8 323 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 ATP6V0E2Q8NHE4 81 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 CIRBP-AS1Q8TBR5 109 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 BLNKQ8WV28 456 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 SLC25A38Q96DW6 304 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 SCGB3A2Q96PL1 93 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 ODF3Q96PU9 254 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 SHANK2-AS3Q9BTD1 123 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 PAXXQ9BUH6 204 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 VCX3BQ9H321 246 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 ANAPC10Q9UM13 185 aa3.8□□□□□ -1.8
USP49-205ENST00000448078 IGKV1D-37A0A075B6S9 117 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 A0A087X0K7 114 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 C7orf71A4D174 169 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 WRBO00258 174 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 RNASE4P34096 147 aaKnown RBP3.79□□□□□ -1.8
USP49-205ENST00000448078 TCL1AP56279 114 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 POLR2GP62487 172 aaKnown RBP eCLIP3.79□□□□□ -1.8
USP49-205ENST00000448078 SRPXP78539 464 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 RAB31Q13636 194 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 SMCO1Q147U7 214 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 MEF2DQ14814 521 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 GUK1Q16774 197 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 KCNIP4Q6PIL6 250 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 SELENOHQ8IZQ5 122 aaKnown RBP3.79□□□□□ -1.8
USP49-205ENST00000448078 OR10G7Q8NGN6 311 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 ZNF431Q8TF32 576 aaPredicted RBP3.79□□□□□ -1.8
USP49-205ENST00000448078 IL22RA2Q969J5 263 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 LINC00477Q96M19 166 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 RBKSQ9H477 322 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 SLC39A9Q9NUM3 307 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 URGCP-MRPS24S4R325 110 aa3.79□□□□□ -1.8
USP49-205ENST00000448078 SMCO3A2RU48 225 aa3.78□□□□□ -1.8
USP49-205ENST00000448078 DISC1C4P0D8 188 aa3.78□□□□□ -1.8
USP49-205ENST00000448078 IGHV3-30P01768 117 aa3.78□□□□□ -1.8
USP49-205ENST00000448078 IGHV3-33P01772 117 aa3.78□□□□□ -1.8
USP49-205ENST00000448078 NMBP08949 121 aa3.78□□□□□ -1.8
USP49-205ENST00000448078 IGHV3-30-3P0DP02 117 aa3.78□□□□□ -1.8
USP49-205ENST00000448078 IGHV3-30-5P0DP03 117 aa3.78□□□□□ -1.8
USP49-205ENST00000448078 SNX29P2Q8IUI4 249 aa3.78□□□□□ -1.8
USP49-205ENST00000448078 C12orf45Q8N5I9 185 aaPredicted RBP3.78□□□□□ -1.8
USP49-205ENST00000448078 OR4C5Q8NGB2 326 aa3.78□□□□□ -1.8
USP49-205ENST00000448078 GLYATL2Q8WU03 294 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms