RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 RAB31Q13636 194 aa4.79□□□□□ -1.64
LRRC28-203ENST00000447360 C10orf113Q5VZT2 155 aa4.79□□□□□ -1.64
LRRC28-203ENST00000447360 Q6ZRG5 221 aa4.79□□□□□ -1.64
LRRC28-203ENST00000447360 S100A7AQ86SG5 101 aa4.79□□□□□ -1.64
LRRC28-203ENST00000447360 BPIFA4PQ86YQ2 179 aa4.79□□□□□ -1.64
LRRC28-203ENST00000447360 OR8A1Q8NGG7 326 aa4.79□□□□□ -1.64
LRRC28-203ENST00000447360 VSIG2Q96IQ7 327 aa4.79□□□□□ -1.64
LRRC28-203ENST00000447360 SLC39A9Q9NUM3 307 aa4.79□□□□□ -1.64
LRRC28-203ENST00000447360 UBE2L5PA0A1B0GUS4 154 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 GAGE12BA1L429 117 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 NPIPB6E9PJ23 425 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 SLC17A3O00476 420 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 GAGE7O76087 117 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 GAGE12FP0CL80 117 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 GAGE12GP0CL81 117 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 GAGE12IP0CL82 117 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 CXCL2P19875 107 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 HBG1P69891 147 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 HBG2P69892 147 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 CYCSP99999 105 aaKnown RBP4.78□□□□□ -1.64
LRRC28-203ENST00000447360 BAXQ07812 192 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 LRRC37A5PQ49AS3 106 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 GCSAMLQ5JQS6 135 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 STX12Q86Y82 276 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 ZNF738Q8NE65 137 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 OR5C1Q8NGR4 320 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 OR1L4Q8NGR5 311 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 LRRC20Q8TCA0 184 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 PPP1R1CQ8WVI7 109 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 RPUSD4Q96CM3 377 aaKnown RBP4.78□□□□□ -1.64
LRRC28-203ENST00000447360 C20orf144Q9BQM9 153 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 MSRB1Q9NZV6 116 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 RNF24Q9Y225 148 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 PXMP4Q9Y6I8 212 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 LY96Q9Y6Y9 160 aa4.78□□□□□ -1.64
LRRC28-203ENST00000447360 SCO2A0A1W2PP80 73 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 F5H697 171 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 MPDU1O75352 247 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 NDUFB4O95168 129 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 MPC2O95563 127 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 FGF7P21781 194 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 CDKN1BP46527 198 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 DEFA1P59665 94 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 DEFA3P59666 94 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 RHOBP62745 196 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 HIST1H1AQ02539 215 aaPredicted RBP4.77□□□□□ -1.65
LRRC28-203ENST00000447360 DAZ2Q13117 558 aaKnown RBP4.77□□□□□ -1.65
LRRC28-203ENST00000447360 LCN15Q6UWW0 184 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 Q6ZSA8 131 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 THAP6Q8TBB0 222 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 FAM167A-AS1Q96KT0 104 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 PFDN5Q99471 154 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 SLC50A1Q9BRV3 221 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 NPCDR1Q9BY65 106 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 WDR61Q9GZS3 305 aaKnown RBP4.77□□□□□ -1.65
LRRC28-203ENST00000447360 SLC25A31Q9H0C2 315 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 TMPRSS5Q9H3S3 457 aa4.77□□□□□ -1.65
LRRC28-203ENST00000447360 TRBV19A0A075B6N1 114 aa4.76□□□□□ -1.65
LRRC28-203ENST00000447360 LRCOL1A6NCL2 159 aa4.76□□□□□ -1.65
LRRC28-203ENST00000447360 SNURFLB1AK76 121 aa4.76□□□□□ -1.65
LRRC28-203ENST00000447360 SSNA1O43805 119 aa4.76□□□□□ -1.65
LRRC28-203ENST00000447360 PYYP10082 97 aa4.76□□□□□ -1.65
LRRC28-203ENST00000447360 HIST1H1EP10412 219 aaKnown RBP4.76□□□□□ -1.65
LRRC28-203ENST00000447360 EVI2AP22794 236 aa4.76□□□□□ -1.65
LRRC28-203ENST00000447360 GUK1Q16774 197 aa4.76□□□□□ -1.65
LRRC28-203ENST00000447360 MIR17HGQ75NE6 70 aa4.76□□□□□ -1.65
LRRC28-203ENST00000447360 Q8N814 137 aa4.76□□□□□ -1.65
LRRC28-203ENST00000447360 LINC00467Q9BRT7 94 aa4.76□□□□□ -1.65
LRRC28-203ENST00000447360 SLC25A2Q9BXI2 301 aa4.76□□□□□ -1.65
LRRC28-203ENST00000447360 PARD6GQ9BYG4 376 aaPredicted RBP4.76□□□□□ -1.65
LRRC28-203ENST00000447360 WFDC1Q9HC57 220 aa4.76□□□□□ -1.65
LRRC28-203ENST00000447360 TMEM14CQ9P0S9 112 aa4.76□□□□□ -1.65
LRRC28-203ENST00000447360 ALG5Q9Y673 324 aa4.76□□□□□ -1.65
LRRC28-203ENST00000447360 ICOSQ9Y6W8 199 aa4.76□□□□□ -1.65
LRRC28-203ENST00000447360 PKHD1L1Q86WI1 4243 aa4.76□□□□□ -1.65
LRRC28-203ENST00000447360 TRGV2A0A075B6R0 118 aa4.75□□□□□ -1.65
LRRC28-203ENST00000447360 M0R3E3 92 aa4.75□□□□□ -1.65
LRRC28-203ENST00000447360 ZNF253O75346 499 aa4.75□□□□□ -1.65
LRRC28-203ENST00000447360 ZNF324O75467 553 aaPredicted RBP4.75□□□□□ -1.65
LRRC28-203ENST00000447360 CT45A10P0DMU9 189 aa4.75□□□□□ -1.65
LRRC28-203ENST00000447360 RPL12P30050 165 aaKnown RBP4.75□□□□□ -1.65
LRRC28-203ENST00000447360 KRTAP10-4P60372 401 aaPredicted RBP4.75□□□□□ -1.65
LRRC28-203ENST00000447360 LYPD5Q6UWN5 251 aa4.75□□□□□ -1.65
LRRC28-203ENST00000447360 C10orf126Q8N4M7 172 aa4.75□□□□□ -1.65
LRRC28-203ENST00000447360 CTDSP1Q9GZU7 261 aa4.75□□□□□ -1.65
LRRC28-203ENST00000447360 HSPB11Q9Y547 144 aa4.75□□□□□ -1.65
LRRC28-203ENST00000447360 PAX4O43316 350 aa4.74□□□□□ -1.65
LRRC28-203ENST00000447360 PSCAO43653 123 aa4.74□□□□□ -1.65
LRRC28-203ENST00000447360 PTTG1O95997 202 aa4.74□□□□□ -1.65
LRRC28-203ENST00000447360 NBEAP1P0C6P0 100 aa4.74□□□□□ -1.65
LRRC28-203ENST00000447360 SUMO2P61956 95 aaKnown RBP4.74□□□□□ -1.65
LRRC28-203ENST00000447360 ERCC8Q13216 396 aa4.74□□□□□ -1.65
LRRC28-203ENST00000447360 SLAQ13239 276 aa4.74□□□□□ -1.65
LRRC28-203ENST00000447360 MRPL23Q16540 153 aaKnown RBP4.74□□□□□ -1.65
LRRC28-203ENST00000447360 Q5BKY6 102 aa4.74□□□□□ -1.65
LRRC28-203ENST00000447360 Q6ZTI0 123 aa4.74□□□□□ -1.65
LRRC28-203ENST00000447360 EXOC3-AS1Q8N2X6 119 aa4.74□□□□□ -1.65
LRRC28-203ENST00000447360 FXYD5Q96DB9 178 aa4.74□□□□□ -1.65
LRRC28-203ENST00000447360 MRPL53Q96EL3 112 aaKnown RBP4.74□□□□□ -1.65
LRRC28-203ENST00000447360 FAM19A4Q96LR4 140 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms