RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CENPWQ5EE01 88 aa13.11□□□□□ -0.31
TRAPPC4-203ENST00000447216 Q6ZQT7 251 aa13.11□□□□□ -0.31
TRAPPC4-203ENST00000447216 IGF2BP2-AS1Q96M15 143 aa13.11□□□□□ -0.31
TRAPPC4-203ENST00000447216 TRBV20OR9-2A0A075B6H5 130 aa13.1□□□□□ -0.31
TRAPPC4-203ENST00000447216 TRAV12-3A0A0B4J271 114 aa13.1□□□□□ -0.31
TRAPPC4-203ENST00000447216 TRBV7-9A0A0J9YWB2 115 aa13.1□□□□□ -0.31
TRAPPC4-203ENST00000447216 C7orf71A4D174 169 aa13.1□□□□□ -0.31
TRAPPC4-203ENST00000447216 NDUFS6O75380 124 aaKnown RBP13.1□□□□□ -0.31
TRAPPC4-203ENST00000447216 INSP01308 110 aa13.1□□□□□ -0.31
TRAPPC4-203ENST00000447216 TAS2R60P59551 318 aa13.1□□□□□ -0.31
TRAPPC4-203ENST00000447216 BAGE2Q86Y30 109 aa13.1□□□□□ -0.31
TRAPPC4-203ENST00000447216 CSNK1G2-AS1Q8NCQ2 148 aa13.1□□□□□ -0.31
TRAPPC4-203ENST00000447216 C1QTNF4Q9BXJ3 329 aa13.1□□□□□ -0.31
TRAPPC4-203ENST00000447216 IGHV3OR16-12A0A075B7B8 117 aa13.09□□□□□ -0.31
TRAPPC4-203ENST00000447216 PGPEP1LA6NFU8 196 aa13.09□□□□□ -0.31
TRAPPC4-203ENST00000447216 ZNF80P51504 273 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-203ENST00000447216 SAPCD1Q5SSQ6 148 aa13.09□□□□□ -0.31
TRAPPC4-203ENST00000447216 C1orf158Q8N1D5 194 aa13.09□□□□□ -0.31
TRAPPC4-203ENST00000447216 ZC2HC1AQ96GY0 325 aa13.09□□□□□ -0.31
TRAPPC4-203ENST00000447216 ZFP30Q9Y2G7 519 aa13.09□□□□□ -0.31
TRAPPC4-203ENST00000447216 GCGP01275 180 aa13.08□□□□□ -0.32
TRAPPC4-203ENST00000447216 GNG4P50150 75 aa13.08□□□□□ -0.32
TRAPPC4-203ENST00000447216 SMUG1Q53HV7 270 aa13.08□□□□□ -0.32
TRAPPC4-203ENST00000447216 B9D2Q9BPU9 175 aa13.08□□□□□ -0.32
TRAPPC4-203ENST00000447216 SMIM7Q9BQ49 75 aa13.08□□□□□ -0.32
TRAPPC4-203ENST00000447216 SMDT1Q9H4I9 107 aa13.08□□□□□ -0.32
TRAPPC4-203ENST00000447216 IGLV2-8P01709 118 aa13.07□□□□□ -0.32
TRAPPC4-203ENST00000447216 Q6ZWC4 215 aa13.07□□□□□ -0.32
TRAPPC4-203ENST00000447216 TMEM183AQ8IXX5 376 aa13.07□□□□□ -0.32
TRAPPC4-203ENST00000447216 RNF183Q96D59 192 aa13.07□□□□□ -0.32
TRAPPC4-203ENST00000447216 RCHY1Q96PM5 261 aa13.07□□□□□ -0.32
TRAPPC4-203ENST00000447216 FBN3Q75N90 2809 aa13.07□□□□□ -0.32
TRAPPC4-203ENST00000447216 HUWE1Q7Z6Z7 4374 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-203ENST00000447216 ZNF727A8MUV8 499 aa13.06□□□□□ -0.32
TRAPPC4-203ENST00000447216 OVOL2Q9BRP0 275 aa13.06□□□□□ -0.32
TRAPPC4-203ENST00000447216 TMEM208Q9BTX3 173 aa13.06□□□□□ -0.32
TRAPPC4-203ENST00000447216 GOLT1BQ9Y3E0 138 aa13.06□□□□□ -0.32
TRAPPC4-203ENST00000447216 TENM3Q9P273 2699 aa13.06□□□□□ -0.32
TRAPPC4-203ENST00000447216 SPRY2O43597 315 aa13.05□□□□□ -0.32
TRAPPC4-203ENST00000447216 ZNF324O75467 553 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-203ENST00000447216 PRM2P04554 102 aa13.05□□□□□ -0.32
TRAPPC4-203ENST00000447216 SFTA3P0C7M3 94 aa13.05□□□□□ -0.32
TRAPPC4-203ENST00000447216 MGST1P10620 155 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-203ENST00000447216 CRIP1P50238 77 aa13.05□□□□□ -0.32
TRAPPC4-203ENST00000447216 Q6AWC8 147 aa13.05□□□□□ -0.32
TRAPPC4-203ENST00000447216 LINC01587Q99440 93 aa13.05□□□□□ -0.32
TRAPPC4-203ENST00000447216 TM2D3Q9BRN9 247 aa13.05□□□□□ -0.32
TRAPPC4-203ENST00000447216 NIPSNAP3BQ9BS92 247 aa13.05□□□□□ -0.32
TRAPPC4-203ENST00000447216 MLST8Q9BVC4 326 aa13.05□□□□□ -0.32
TRAPPC4-203ENST00000447216 C9JCJ5 164 aa13.04□□□□□ -0.32
TRAPPC4-203ENST00000447216 SOHLH1Q5JUK2 328 aa13.04□□□□□ -0.32
TRAPPC4-203ENST00000447216 MUC21Q5SSG8 566 aa13.04□□□□□ -0.32
TRAPPC4-203ENST00000447216 PRR27Q6MZM9 219 aa13.04□□□□□ -0.32
TRAPPC4-203ENST00000447216 UQCC3Q6UW78 93 aa13.04□□□□□ -0.32
TRAPPC4-203ENST00000447216 ZNF705AQ6ZN79 300 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-203ENST00000447216 COX8CQ7Z4L0 72 aa13.04□□□□□ -0.32
TRAPPC4-203ENST00000447216 OCC1Q8TAD7 63 aa13.04□□□□□ -0.32
TRAPPC4-203ENST00000447216 ZNF705GA8MUZ8 300 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-203ENST00000447216 SH2D1AO60880 128 aa13.03□□□□□ -0.32
TRAPPC4-203ENST00000447216 EIF4E3Q8N5X7 224 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-203ENST00000447216 OR11H2Q8NH07 326 aa13.03□□□□□ -0.32
TRAPPC4-203ENST00000447216 C20orf144Q9BQM9 153 aa13.03□□□□□ -0.32
TRAPPC4-203ENST00000447216 SPATA25Q9BR10 227 aa13.03□□□□□ -0.32
TRAPPC4-203ENST00000447216 C11orf21Q9P2W6 132 aa13.03□□□□□ -0.32
TRAPPC4-203ENST00000447216 NAGKQ9UJ70 344 aa13.03□□□□□ -0.32
TRAPPC4-203ENST00000447216 X6R8D5 127 aa13.03□□□□□ -0.32
TRAPPC4-203ENST00000447216 TRAV21A0A0B4J279 112 aa13.02□□□□□ -0.33
TRAPPC4-203ENST00000447216 K7EN84 100 aa13.02□□□□□ -0.33
TRAPPC4-203ENST00000447216 HTN1P15515 57 aa13.02□□□□□ -0.33
TRAPPC4-203ENST00000447216 OR5I1Q13606 314 aa13.02□□□□□ -0.33
TRAPPC4-203ENST00000447216 TMEM256Q8N2U0 113 aa13.02□□□□□ -0.33
TRAPPC4-203ENST00000447216 TP53TG1Q9Y2A0 90 aa13.02□□□□□ -0.33
TRAPPC4-203ENST00000447216 COL7A1Q02388 2944 aa13.02□□□□□ -0.33
TRAPPC4-203ENST00000447216 FABP5P3A8MUU1 101 aa13.01□□□□□ -0.33
TRAPPC4-203ENST00000447216 H7BYZ3 331 aa13.01□□□□□ -0.33
TRAPPC4-203ENST00000447216 PFN1P07737 140 aaKnown RBP13.01□□□□□ -0.33
TRAPPC4-203ENST00000447216 FAM74A3Q4VXF1 159 aa13.01□□□□□ -0.33
TRAPPC4-203ENST00000447216 FAM162BQ5T6X4 162 aa13.01□□□□□ -0.33
TRAPPC4-203ENST00000447216 IGHV1OR15-1A0A075B7D0 117 aa13□□□□□ -0.33
TRAPPC4-203ENST00000447216 TMEM218A2RU14 115 aa13□□□□□ -0.33
TRAPPC4-203ENST00000447216 AZU1P20160 251 aa13□□□□□ -0.33
TRAPPC4-203ENST00000447216 TMEM241Q24JQ0 296 aa13□□□□□ -0.33
TRAPPC4-203ENST00000447216 SLC7A5P1Q8MH63 180 aa13□□□□□ -0.33
TRAPPC4-203ENST00000447216 SMIM12Q96EX1 92 aa13□□□□□ -0.33
TRAPPC4-203ENST00000447216 ZMAT4Q9H898 229 aa13□□□□□ -0.33
TRAPPC4-203ENST00000447216 ANXA2RQ3ZCQ2 193 aa12.99□□□□□ -0.33
TRAPPC4-203ENST00000447216 PYGO2Q9BRQ0 406 aa12.99□□□□□ -0.33
TRAPPC4-203ENST00000447216 NAT8Q9UHE5 227 aa12.99□□□□□ -0.33
TRAPPC4-203ENST00000447216 TP53TG3Q9ULZ0 132 aa12.99□□□□□ -0.33
TRAPPC4-203ENST00000447216 LY96Q9Y6Y9 160 aa12.99□□□□□ -0.33
TRAPPC4-203ENST00000447216 M0R036 132 aa12.98□□□□□ -0.33
TRAPPC4-203ENST00000447216 DEFB4AO15263 64 aa12.98□□□□□ -0.33
TRAPPC4-203ENST00000447216 ADCYAP1P18509 176 aa12.98□□□□□ -0.33
TRAPPC4-203ENST00000447216 FAM159AQ6UWV7 190 aa12.98□□□□□ -0.33
TRAPPC4-203ENST00000447216 LINC01551Q86U37 167 aa12.98□□□□□ -0.33
TRAPPC4-203ENST00000447216 IGHV4-28A0A0C4DH34 117 aa12.97□□□□□ -0.33
TRAPPC4-203ENST00000447216 CBY3A6NI87 242 aa12.97□□□□□ -0.33
TRAPPC4-203ENST00000447216 F8W036 122 aa12.97□□□□□ -0.33
TRAPPC4-203ENST00000447216 ORM1P02763 201 aa12.97□□□□□ -0.33
TRAPPC4-203ENST00000447216 RPL23P62829 140 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms