RNA–Protein interactions for RNA: ENST00000446593.1

LINC01880-201, Transcript of long intergenic non-protein coding RNA 1880, humanhuman

TSL 4 BASIC

Gene LINC01880, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01880-201ENST00000446593 SPATA12Q7Z6I5 190 aa4.16□□□□□ -1.74
LINC01880-201ENST00000446593 TRPT1Q86TN4 253 aaKnown RBP4.16□□□□□ -1.74
LINC01880-201ENST00000446593 C6orf223Q8N319 242 aa4.16□□□□□ -1.74
LINC01880-201ENST00000446593 HIST1H2BAQ96A08 127 aa4.16□□□□□ -1.74
LINC01880-201ENST00000446593 ATG101Q9BSB4 218 aa4.16□□□□□ -1.74
LINC01880-201ENST00000446593 SCRT1Q9BWW7 348 aa4.16□□□□□ -1.74
LINC01880-201ENST00000446593 C1QTNF4Q9BXJ3 329 aa4.16□□□□□ -1.74
LINC01880-201ENST00000446593 SLC25A39Q9BZJ4 359 aaPredicted RBP4.16□□□□□ -1.74
LINC01880-201ENST00000446593 DOK5Q9P104 306 aa4.16□□□□□ -1.74
LINC01880-201ENST00000446593 IGHV3OR16-13A0A075B7E8 117 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 IGHV3-74A0A0B4J1X5 117 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 TEX48A0A1B0GUV7 120 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 A0A1B0GV50 99 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 XKRY2A2RUG3 117 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 PPP1R2P9O14990 202 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 ZNF253O75346 499 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 MT-ND4LP03901 98 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 ARL14EPLP0DKL9 152 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 CT45A10P0DMU9 189 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 GATA2P23769 480 aaPredicted RBP4.15□□□□□ -1.75
LINC01880-201ENST00000446593 GCHFRP30047 84 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 RHEBQ15382 184 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 TOR2AQ5JU69 321 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 C15orf54Q8N8G6 183 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 C5orf17Q8NAS9 161 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 CSNK1G2-AS1Q8NCQ2 148 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 DAZAP1Q96EP5 407 aaKnown RBP4.15□□□□□ -1.75
LINC01880-201ENST00000446593 SMIM12Q96EX1 92 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 SHANK2-AS3Q9BTD1 123 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 SEC11CQ9BY50 192 aa4.15□□□□□ -1.75
LINC01880-201ENST00000446593 NBDYA0A0U1RRE5 68 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 SMIM9A6NGZ8 99 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 ZNF98A6NK75 572 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 ZNF727A8MUV8 499 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 M0R036 132 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 PAGE4O60829 102 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 SLC25A5P05141 298 aaKnown RBP4.14□□□□□ -1.75
LINC01880-201ENST00000446593 AKR1C3P42330 323 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 GNG4P50150 75 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 EMP1P54849 157 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 TMEM241Q24JQ0 296 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 GCSAMLQ5JQS6 135 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 ZNF506Q5JVG8 444 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 ACTL10Q5JWF8 245 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 SAPCD1Q5SSQ6 148 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 SPATA31B1PQ5VZV4 182 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 KCNIP4Q6PIL6 250 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 TOMM20LQ6UXN7 152 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 SIGLEC15Q6ZMC9 328 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 C15orf53Q8NAA6 179 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 OR10J6PQ8NGY7 276 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 LYPD6BQ8NI32 183 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 FRZBQ92765 325 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 BORCS7Q96B45 105 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 FMC1Q96HJ9 113 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 C16orf92Q96LL3 132 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 CLUHP3Q96NS8 147 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 SMIM7Q9BQ49 75 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 VSIRQ9H7M9 311 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 OTORQ9NRC9 128 aa4.14□□□□□ -1.75
LINC01880-201ENST00000446593 LOC102723971A0A1B0GUV8 181 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 TMEM218A2RU14 115 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 KNCNA6PVL3 124 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 H3BRN7 92 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 APOC3P02656 99 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 SFTA3P0C7M3 94 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 HTN3P15516 51 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 CRYBB3P26998 211 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 TSPOP30536 169 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 FGF8P55075 233 aaPredicted RBP4.13□□□□□ -1.75
LINC01880-201ENST00000446593 TAS2R60P59551 318 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 RANP62826 216 aaKnown RBP4.13□□□□□ -1.75
LINC01880-201ENST00000446593 USF2Q15853 346 aaPredicted RBP4.13□□□□□ -1.75
LINC01880-201ENST00000446593 TMEM78Q5T7P6 136 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 EBLN2Q6P2I7 272 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 PATE2Q6UY27 113 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 MIR17HGQ75NE6 70 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 FAM24BQ8N5W8 94 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 BLNKQ8WV28 456 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 TMEM37Q8WXS4 190 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 MRPL53Q96EL3 112 aaKnown RBP4.13□□□□□ -1.75
LINC01880-201ENST00000446593 TVP23CQ96ET8 276 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 NEU1Q99519 415 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 SEPSECSQ9HD40 501 aaKnown RBP4.13□□□□□ -1.75
LINC01880-201ENST00000446593 NAT8Q9UHE5 227 aa4.13□□□□□ -1.75
LINC01880-201ENST00000446593 IGHV3-66A0A0C4DH42 116 aa4.12□□□□□ -1.75
LINC01880-201ENST00000446593 PGPA6NDG6 321 aa4.12□□□□□ -1.75
LINC01880-201ENST00000446593 H3BS24 57 aa4.12□□□□□ -1.75
LINC01880-201ENST00000446593 K7EQG2 157 aa4.12□□□□□ -1.75
LINC01880-201ENST00000446593 ISLRO14498 428 aa4.12□□□□□ -1.75
LINC01880-201ENST00000446593 ATP6V1G1O75348 118 aa4.12□□□□□ -1.75
LINC01880-201ENST00000446593 DUSP14O95147 198 aaKnown RBP4.12□□□□□ -1.75
LINC01880-201ENST00000446593 APOHP02749 345 aaPredicted RBP4.12□□□□□ -1.75
LINC01880-201ENST00000446593 OR10J4P0C629 311 aa4.12□□□□□ -1.75
LINC01880-201ENST00000446593 ZNF688P0C7X2 276 aa4.12□□□□□ -1.75
LINC01880-201ENST00000446593 CCL18P55774 89 aa4.12□□□□□ -1.75
LINC01880-201ENST00000446593 UBE2G2P60604 165 aa4.12□□□□□ -1.75
LINC01880-201ENST00000446593 FLI1Q01543 452 aaPredicted RBP4.12□□□□□ -1.75
LINC01880-201ENST00000446593 ZNF726P1Q15940 193 aa4.12□□□□□ -1.75
LINC01880-201ENST00000446593 ZNF674Q2M3X9 581 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms