RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 VGLL1Q99990 258 aa5.34□□□□□ -1.55
LINC02549-201ENST00000445346 MRPL32Q9BYC8 188 aaKnown RBP5.34□□□□□ -1.55
LINC02549-201ENST00000445346 GSKIPQ9P0R6 139 aa5.34□□□□□ -1.55
LINC02549-201ENST00000445346 TP53TG3Q9ULZ0 132 aa5.34□□□□□ -1.55
LINC02549-201ENST00000445346 TIMM9Q9Y5J7 89 aa5.34□□□□□ -1.55
LINC02549-201ENST00000445346 MYCBP2O75592 4640 aa5.34□□□□□ -1.56
LINC02549-201ENST00000445346 IGHV1OR15-1A0A075B7D0 117 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 C9orf170A2RU37 121 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 KRTAP29-1A8MX34 341 aaPredicted RBP5.33□□□□□ -1.56
LINC02549-201ENST00000445346 KLLNB2CW77 178 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 M0R3E3 92 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 TSC22D2O75157 780 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 ORM1P02763 201 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 TNFSF8P32971 234 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 CAMLGP49069 296 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 UBE2MP61081 183 aaKnown RBP5.33□□□□□ -1.56
LINC02549-201ENST00000445346 TMEM78Q5T7P6 136 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 C12orf45Q8N5I9 185 aaPredicted RBP5.33□□□□□ -1.56
LINC02549-201ENST00000445346 Q8N814 137 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 MRPL53Q96EL3 112 aaKnown RBP5.33□□□□□ -1.56
LINC02549-201ENST00000445346 MGST2Q99735 147 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 TXNDC17Q9BRA2 123 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 GGACTQ9BVM4 153 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 AGPAT4-IT1Q9H0P7 198 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 AAMDCQ9H7C9 122 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 PRELID1Q9Y255 219 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 RCL1Q9Y2P8 373 aaKnown RBP5.33□□□□□ -1.56
LINC02549-201ENST00000445346 COX11Q9Y6N1 276 aa5.33□□□□□ -1.56
LINC02549-201ENST00000445346 LRCOL1A6NCL2 159 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 C9JCJ5 164 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 L7N2F9 121 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 ZNF253O75346 499 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 SFTA3P0C7M3 94 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 SMIM18P0DKX4 95 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 HIST1H1EP10412 219 aaKnown RBP5.32□□□□□ -1.56
LINC02549-201ENST00000445346 PPT1P50897 306 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 BCAP31P51572 246 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 TAS2R30P59541 319 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 VAMP2P63027 116 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 IAH1Q2TAA2 248 aaPredicted RBP5.32□□□□□ -1.56
LINC02549-201ENST00000445346 MIC13Q5XKP0 118 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 NRARPQ7Z6K4 114 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 DYNC2LI1Q8TCX1 351 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 BLNKQ8WV28 456 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 PFDN5Q99471 154 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 SOSTQ9BQB4 213 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 SRRQ9GZT4 340 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 Q9HAA7 133 aa5.32□□□□□ -1.56
LINC02549-201ENST00000445346 TRBV19A0A075B6N1 114 aa5.31□□□□□ -1.56
LINC02549-201ENST00000445346 IGHV3-38A0A0C4DH36 116 aa5.31□□□□□ -1.56
LINC02549-201ENST00000445346 NOL3O60936 208 aaKnown RBP5.31□□□□□ -1.56
LINC02549-201ENST00000445346 CRISP2P16562 243 aa5.31□□□□□ -1.56
LINC02549-201ENST00000445346 INPP1P49441 399 aa5.31□□□□□ -1.56
LINC02549-201ENST00000445346 ARL16Q0P5N6 197 aa5.31□□□□□ -1.56
LINC02549-201ENST00000445346 FAM122CQ6P4D5 195 aa5.31□□□□□ -1.56
LINC02549-201ENST00000445346 IQCF2Q8IXL9 164 aa5.31□□□□□ -1.56
LINC02549-201ENST00000445346 EXOC3-AS1Q8N2X6 119 aa5.31□□□□□ -1.56
LINC02549-201ENST00000445346 NHLRC2Q8NBF2 726 aa5.31□□□□□ -1.56
LINC02549-201ENST00000445346 DEDD2Q8WXF8 326 aa5.31□□□□□ -1.56
LINC02549-201ENST00000445346 TRIM63Q969Q1 353 aa5.31□□□□□ -1.56
LINC02549-201ENST00000445346 ZNF479Q96JC4 524 aa5.31□□□□□ -1.56
LINC02549-201ENST00000445346 FAM19A4Q96LR4 140 aa5.31□□□□□ -1.56
LINC02549-201ENST00000445346 MRPS26Q9BYN8 205 aaKnown RBP5.31□□□□□ -1.56
LINC02549-201ENST00000445346 SLC25A31Q9H0C2 315 aa5.31□□□□□ -1.56
LINC02549-201ENST00000445346 C20orf85Q9H1P6 137 aa5.31□□□□□ -1.56
LINC02549-201ENST00000445346 GPN1Q9HCN4 374 aaPredicted RBP5.31□□□□□ -1.56
LINC02549-201ENST00000445346 IGKV2-40A0A087WW87 121 aaPredicted RBP5.3□□□□□ -1.56
LINC02549-201ENST00000445346 TRAV8-6A0A0B4J262 113 aa5.3□□□□□ -1.56
LINC02549-201ENST00000445346 C7orf66A4D0T2 115 aa5.3□□□□□ -1.56
LINC02549-201ENST00000445346 IGKV2D-40P01614 121 aaPredicted RBP5.3□□□□□ -1.56
LINC02549-201ENST00000445346 C1QBP02746 253 aa5.3□□□□□ -1.56
LINC02549-201ENST00000445346 NMBP08949 121 aa5.3□□□□□ -1.56
LINC02549-201ENST00000445346 BAXQ07812 192 aa5.3□□□□□ -1.56
LINC02549-201ENST00000445346 MUC21Q5SSG8 566 aa5.3□□□□□ -1.56
LINC02549-201ENST00000445346 Q6ZQT7 251 aa5.3□□□□□ -1.56
LINC02549-201ENST00000445346 C9orf47Q6ZRZ4 202 aa5.3□□□□□ -1.56
LINC02549-201ENST00000445346 SH2D6Q7Z4S9 175 aa5.3□□□□□ -1.56
LINC02549-201ENST00000445346 ZFAND2AQ8N6M9 145 aa5.3□□□□□ -1.56
LINC02549-201ENST00000445346 OR10G4Q8NGN3 311 aa5.3□□□□□ -1.56
LINC02549-201ENST00000445346 SLIRPQ9GZT3 109 aaKnown RBP5.3□□□□□ -1.56
LINC02549-201ENST00000445346 SLC39A9Q9NUM3 307 aa5.3□□□□□ -1.56
LINC02549-201ENST00000445346 ZNF492Q9P255 531 aa5.3□□□□□ -1.56
LINC02549-201ENST00000445346 IBA57-AS1B1ANH7 110 aa5.29□□□□□ -1.56
LINC02549-201ENST00000445346 F5H697 171 aa5.29□□□□□ -1.56
LINC02549-201ENST00000445346 CST7O76096 145 aa5.29□□□□□ -1.56
LINC02549-201ENST00000445346 NDUFB4O95168 129 aa5.29□□□□□ -1.56
LINC02549-201ENST00000445346 MBPP02686 304 aaPredicted RBP5.29□□□□□ -1.56
LINC02549-201ENST00000445346 PYYP10082 97 aa5.29□□□□□ -1.56
LINC02549-201ENST00000445346 S100A5P33763 92 aa5.29□□□□□ -1.56
LINC02549-201ENST00000445346 CAV2P51636 162 aa5.29□□□□□ -1.56
LINC02549-201ENST00000445346 TMBIM6P55061 237 aa5.29□□□□□ -1.56
LINC02549-201ENST00000445346 PDE6HQ13956 83 aa5.29□□□□□ -1.56
LINC02549-201ENST00000445346 ZNF846Q147U1 533 aa5.29□□□□□ -1.56
LINC02549-201ENST00000445346 LINC01556Q5JQF7 62 aa5.29□□□□□ -1.56
LINC02549-201ENST00000445346 OR10J3Q5JRS4 329 aa5.29□□□□□ -1.56
LINC02549-201ENST00000445346 PRR9Q5T870 116 aa5.29□□□□□ -1.56
LINC02549-201ENST00000445346 OR4C5Q8NGB2 326 aa5.29□□□□□ -1.56
LINC02549-201ENST00000445346 BCL7BQ9BQE9 202 aa5.29□□□□□ -1.56
LINC02549-201ENST00000445346 SPXQ9BT56 116 aa5.29□□□□□ -1.56
LINC02549-201ENST00000445346 UQCC1Q9NVA1 299 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms