RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 FAM19A4Q96LR4 140 aa10.19□□□□□ -0.78
SSBP3-208ENST00000444533 PSG8Q9UQ74 426 aa10.19□□□□□ -0.78
SSBP3-208ENST00000444533 DNAH9Q9NYC9 4486 aa10.19□□□□□ -0.78
SSBP3-208ENST00000444533 TRAV8-1A0A0A6YYK1 113 aa10.18□□□□□ -0.78
SSBP3-208ENST00000444533 S100A9P06702 114 aaKnown RBP10.18□□□□□ -0.78
SSBP3-208ENST00000444533 BTN1A1Q13410 526 aa10.18□□□□□ -0.78
SSBP3-208ENST00000444533 ZFAND2AQ8N6M9 145 aa10.18□□□□□ -0.78
SSBP3-208ENST00000444533 FMC1Q96HJ9 113 aa10.18□□□□□ -0.78
SSBP3-208ENST00000444533 TRAV21A0A0B4J279 112 aa10.17□□□□□ -0.78
SSBP3-208ENST00000444533 CBY3A6NI87 242 aa10.17□□□□□ -0.78
SSBP3-208ENST00000444533 RBMY1A1P0DJD3 496 aaKnown RBP10.17□□□□□ -0.78
SSBP3-208ENST00000444533 RBMY1CP0DJD4 496 aa10.17□□□□□ -0.78
SSBP3-208ENST00000444533 ATP5G3P48201 142 aa10.17□□□□□ -0.78
SSBP3-208ENST00000444533 KIR3DS1Q14943 382 aa10.17□□□□□ -0.78
SSBP3-208ENST00000444533 RBMY1FQ15415 496 aaKnown RBP10.17□□□□□ -0.78
SSBP3-208ENST00000444533 SMUG1Q53HV7 270 aa10.17□□□□□ -0.78
SSBP3-208ENST00000444533 FAM159AQ6UWV7 190 aa10.17□□□□□ -0.78
SSBP3-208ENST00000444533 ZNF680Q8NEM1 530 aa10.17□□□□□ -0.78
SSBP3-208ENST00000444533 TMEM263Q8WUH6 116 aaKnown RBP10.17□□□□□ -0.78
SSBP3-208ENST00000444533 SGK494Q96LW2 274 aa10.17□□□□□ -0.78
SSBP3-208ENST00000444533 SNURFLB1AK76 121 aa10.16□□□□□ -0.78
SSBP3-208ENST00000444533 PDE6DO43924 150 aa10.16□□□□□ -0.78
SSBP3-208ENST00000444533 PMS2P11Q13670 270 aa10.16□□□□□ -0.78
SSBP3-208ENST00000444533 EIF4E3Q8N5X7 224 aaKnown RBP10.16□□□□□ -0.78
SSBP3-208ENST00000444533 ZFP30Q9Y2G7 519 aa10.16□□□□□ -0.78
SSBP3-208ENST00000444533 TIMM8BQ9Y5J9 83 aaPredicted RBP10.16□□□□□ -0.78
SSBP3-208ENST00000444533 STAB2Q8WWQ8 2551 aa10.16□□□□□ -0.78
SSBP3-208ENST00000444533 TRAV34A0A0B4J273 112 aa10.15□□□□□ -0.78
SSBP3-208ENST00000444533 ZNF324O75467 553 aaPredicted RBP10.15□□□□□ -0.78
SSBP3-208ENST00000444533 Q6AWC8 147 aa10.15□□□□□ -0.78
SSBP3-208ENST00000444533 KRTAP3-3Q9BYR6 98 aa10.15□□□□□ -0.78
SSBP3-208ENST00000444533 KRTAP3-2Q9BYR7 98 aa10.15□□□□□ -0.78
SSBP3-208ENST00000444533 VAX2Q9UIW0 290 aa10.15□□□□□ -0.78
SSBP3-208ENST00000444533 NAGKQ9UJ70 344 aa10.15□□□□□ -0.78
SSBP3-208ENST00000444533 TENM3Q9P273 2699 aa10.15□□□□□ -0.78
SSBP3-208ENST00000444533 IGHV1OR15-1A0A075B7D0 117 aa10.14□□□□□ -0.79
SSBP3-208ENST00000444533 NUPR2A6NF83 97 aa10.14□□□□□ -0.79
SSBP3-208ENST00000444533 LYRM9A8MSI8 78 aa10.14□□□□□ -0.79
SSBP3-208ENST00000444533 BCL2P10415 239 aa10.14□□□□□ -0.79
SSBP3-208ENST00000444533 CCL20P78556 96 aa10.14□□□□□ -0.79
SSBP3-208ENST00000444533 MEF2BQ02080 365 aaPredicted RBP10.14□□□□□ -0.79
SSBP3-208ENST00000444533 FAM222AQ5U5X8 452 aa10.14□□□□□ -0.79
SSBP3-208ENST00000444533 ZFAND6Q6FIF0 208 aa10.14□□□□□ -0.79
SSBP3-208ENST00000444533 TEX261Q6UWH6 196 aa10.14□□□□□ -0.79
SSBP3-208ENST00000444533 KCNS1Q96KK3 526 aa10.14□□□□□ -0.79
SSBP3-208ENST00000444533 LINC00467Q9BRT7 94 aa10.14□□□□□ -0.79
SSBP3-208ENST00000444533 KLK5Q9Y337 293 aaPredicted RBP10.14□□□□□ -0.79
SSBP3-208ENST00000444533 HUWE1Q7Z6Z7 4374 aaKnown RBP10.13□□□□□ -0.79
SSBP3-208ENST00000444533 TRGV11A0A075B6L2 103 aa10.13□□□□□ -0.79
SSBP3-208ENST00000444533 SCO2A0A1W2PP80 73 aa10.13□□□□□ -0.79
SSBP3-208ENST00000444533 GCGP01275 180 aa10.13□□□□□ -0.79
SSBP3-208ENST00000444533 NANOS2P60321 138 aaKnown RBP10.13□□□□□ -0.79
SSBP3-208ENST00000444533 DAD1P61803 113 aa10.13□□□□□ -0.79
SSBP3-208ENST00000444533 TMEM183BQ1AE95 376 aa10.13□□□□□ -0.79
SSBP3-208ENST00000444533 ANXA2RQ3ZCQ2 193 aa10.13□□□□□ -0.79
SSBP3-208ENST00000444533 Q86TA4 180 aa10.13□□□□□ -0.79
SSBP3-208ENST00000444533 LINC00479Q96M42 142 aa10.13□□□□□ -0.79
SSBP3-208ENST00000444533 DKK2Q9UBU2 259 aa10.13□□□□□ -0.79
SSBP3-208ENST00000444533 TRBV6-1A0A0K0K1D8 114 aa10.12□□□□□ -0.79
SSBP3-208ENST00000444533 IGLV2-11P01706 119 aa10.12□□□□□ -0.79
SSBP3-208ENST00000444533 PFN1P07737 140 aaKnown RBP10.12□□□□□ -0.79
SSBP3-208ENST00000444533 AZU1P20160 251 aa10.12□□□□□ -0.79
SSBP3-208ENST00000444533 ZNF415Q09FC8 603 aa10.12□□□□□ -0.79
SSBP3-208ENST00000444533 MUC21Q5SSG8 566 aa10.12□□□□□ -0.79
SSBP3-208ENST00000444533 PRR9Q5T870 116 aa10.12□□□□□ -0.79
SSBP3-208ENST00000444533 RNASE8Q8TDE3 154 aaKnown RBP10.12□□□□□ -0.79
SSBP3-208ENST00000444533 C8orf49Q96NF6 230 aa10.12□□□□□ -0.79
SSBP3-208ENST00000444533 SDF2L1Q9HCN8 221 aa10.12□□□□□ -0.79
SSBP3-208ENST00000444533 KLF12Q9Y4X4 402 aa10.12□□□□□ -0.79
SSBP3-208ENST00000444533 TRAV10A0A0B4J240 114 aa10.11□□□□□ -0.79
SSBP3-208ENST00000444533 FABP5P3A8MUU1 101 aa10.11□□□□□ -0.79
SSBP3-208ENST00000444533 PRM2P04554 102 aa10.11□□□□□ -0.79
SSBP3-208ENST00000444533 RAB14P61106 215 aa10.11□□□□□ -0.79
SSBP3-208ENST00000444533 IBA57Q5T440 356 aaKnown RBP10.11□□□□□ -0.79
SSBP3-208ENST00000444533 PHLDA1Q8WV24 401 aaPredicted RBP10.11□□□□□ -0.79
SSBP3-208ENST00000444533 TVP23CQ96ET8 276 aa10.11□□□□□ -0.79
SSBP3-208ENST00000444533 EIF5A2Q9GZV4 153 aaKnown RBP10.11□□□□□ -0.79
SSBP3-208ENST00000444533 NOP10Q9NPE3 64 aaKnown RBP10.11□□□□□ -0.79
SSBP3-208ENST00000444533 MED9Q9NWA0 146 aa10.11□□□□□ -0.79
SSBP3-208ENST00000444533 RBFOX3A6NFN3 312 aa10.1□□□□□ -0.79
SSBP3-208ENST00000444533 LTAP01374 205 aa10.1□□□□□ -0.79
SSBP3-208ENST00000444533 DEFB130BP0DP73 79 aa10.1□□□□□ -0.79
SSBP3-208ENST00000444533 DEFB130AP0DP74 79 aa10.1□□□□□ -0.79
SSBP3-208ENST00000444533 CASC10Q5T4H9 136 aa10.1□□□□□ -0.79
SSBP3-208ENST00000444533 BAGE2Q86Y30 109 aa10.1□□□□□ -0.79
SSBP3-208ENST00000444533 C2CD4CQ8TF44 421 aa10.1□□□□□ -0.79
SSBP3-208ENST00000444533 CELA1Q9UNI1 258 aa10.1□□□□□ -0.79
SSBP3-208ENST00000444533 RPL35P42766 123 aaKnown RBP10.09□□□□□ -0.79
SSBP3-208ENST00000444533 DAZ2Q13117 558 aaKnown RBP10.09□□□□□ -0.79
SSBP3-208ENST00000444533 FAM162BQ5T6X4 162 aa10.09□□□□□ -0.79
SSBP3-208ENST00000444533 CEMP1Q6PRD7 247 aaPredicted RBP10.09□□□□□ -0.79
SSBP3-208ENST00000444533 TMEM183AQ8IXX5 376 aa10.09□□□□□ -0.79
SSBP3-208ENST00000444533 LYPD6BQ8NI32 183 aa10.09□□□□□ -0.79
SSBP3-208ENST00000444533 C11orf52Q96A22 123 aa10.09□□□□□ -0.79
SSBP3-208ENST00000444533 GSN-AS1Q9NRJ2 163 aa10.09□□□□□ -0.79
SSBP3-208ENST00000444533 DEFB131BA0A096LNP1 70 aa10.08□□□□□ -0.8
SSBP3-208ENST00000444533 GNG4P50150 75 aa10.08□□□□□ -0.8
SSBP3-208ENST00000444533 TCL1AP56279 114 aa10.08□□□□□ -0.8
SSBP3-208ENST00000444533 C12orf74Q32Q52 190 aa10.08□□□□□ -0.8
SSBP3-208ENST00000444533 TDRG1Q3Y452 100 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 186.7 ms