RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 IGHV3OR16-8A0A075B7F1 116 aa2.75□□□□□ -1.97
VPS50-206ENST00000443443 MUC21A0A0G2JKD1 596 aa2.75□□□□□ -1.97
VPS50-206ENST00000443443 SMIM31A0A1B0GVY4 71 aa2.75□□□□□ -1.97
VPS50-206ENST00000443443 H3BQ15 152 aa2.75□□□□□ -1.97
VPS50-206ENST00000443443 RPL36A-HNRNPH2H7BZ11 118 aa2.75□□□□□ -1.97
VPS50-206ENST00000443443 SSSCA1O60232 199 aa2.75□□□□□ -1.97
VPS50-206ENST00000443443 IGLV1-51P01701 117 aa2.75□□□□□ -1.97
VPS50-206ENST00000443443 BAALC-AS2P0C853 105 aa2.75□□□□□ -1.97
VPS50-206ENST00000443443 ATP5EP56381 51 aaPredicted RBP2.75□□□□□ -1.97
VPS50-206ENST00000443443 LINC00315P59091 139 aa2.75□□□□□ -1.97
VPS50-206ENST00000443443 LINC00312Q9Y6C7 94 aa2.75□□□□□ -1.97
VPS50-206ENST00000443443 S4R3C0 116 aa2.75□□□□□ -1.97
VPS50-206ENST00000443443 KDM5AP29375 1690 aaKnown RBP2.75□□□□□ -1.97
VPS50-206ENST00000443443 ANKRD12Q6UB98 2062 aa2.75□□□□□ -1.97
VPS50-206ENST00000443443 ARHGAP5Q13017 1502 aa2.74□□□□□ -1.97
VPS50-206ENST00000443443 MAP3K1Q13233 1512 aa2.74□□□□□ -1.97
VPS50-206ENST00000443443 MYO10Q9HD67 2058 aa2.74□□□□□ -1.97
VPS50-206ENST00000443443 IGKV1D-42A0A075B6H8 117 aa2.74□□□□□ -1.97
VPS50-206ENST00000443443 E7EQL1 145 aa2.74□□□□□ -1.97
VPS50-206ENST00000443443 MT-ATP8P03928 68 aa2.74□□□□□ -1.97
VPS50-206ENST00000443443 SNCAP37840 140 aa2.74□□□□□ -1.97
VPS50-206ENST00000443443 C1orf134Q5TEV5 83 aa2.74□□□□□ -1.97
VPS50-206ENST00000443443 DSCR8Q96T75 97 aa2.74□□□□□ -1.97
VPS50-206ENST00000443443 HIGD2AQ9BW72 106 aa2.74□□□□□ -1.97
VPS50-206ENST00000443443 MED9Q9NWA0 146 aa2.74□□□□□ -1.97
VPS50-206ENST00000443443 TRPM3Q9HCF6 1732 aaPredicted RBP2.73□□□□□ -1.97
VPS50-206ENST00000443443 PHIPQ8WWQ0 1821 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 ARHGAP21Q5T5U3 1957 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 IGLV3-12A0A075B6K2 115 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 TRAV1-1A0A0B4J248 108 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 A0A0J9YX75 114 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 UBE2L5PA0A1B0GUS4 154 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 HMSDA8MTL9 139 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 PSCAO43653 123 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 UBL3O95164 117 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 PIRTP0C851 137 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 COX7CP15954 63 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 UBE2L3P68036 154 aaKnown RBP2.73□□□□□ -1.97
VPS50-206ENST00000443443 Q0VG73 95 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 ZNF345Q14585 488 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 PEA15Q15121 130 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 IQCJQ1A5X6 159 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 LINC00483Q53H64 154 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 SPANXN1Q5VSR9 72 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 SPINT4Q6UDR6 99 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 CASC2Q6XLA1 102 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 ZNF826PQ6ZT77 177 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 SLC25A26Q70HW3 274 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 FP248Q71RG6 208 aaPredicted RBP2.73□□□□□ -1.97
VPS50-206ENST00000443443 ARPINQ7Z6K5 226 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 TMEM254Q8TBM7 123 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 SCRT1Q9BWW7 348 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 DOCK8Q8NF50 2099 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 NUP205Q92621 2012 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 KDM5DQ9BY66 1539 aa2.73□□□□□ -1.97
VPS50-206ENST00000443443 KIF13AQ9H1H9 1805 aa2.72□□□□□ -1.97
VPS50-206ENST00000443443 TRAV14DV4A0A0A6YYC5 116 aa2.72□□□□□ -1.97
VPS50-206ENST00000443443 RBAKDNA6NC62 111 aa2.72□□□□□ -1.97
VPS50-206ENST00000443443 B4DSR2 109 aa2.72□□□□□ -1.97
VPS50-206ENST00000443443 C5orf67F2Z3F1 127 aa2.72□□□□□ -1.97
VPS50-206ENST00000443443 DSCR4P56555 118 aaPredicted RBP2.72□□□□□ -1.97
VPS50-206ENST00000443443 KRTAP25-1Q3LHN0 102 aa2.72□□□□□ -1.97
VPS50-206ENST00000443443 C5orf38Q86SI9 138 aa2.72□□□□□ -1.97
VPS50-206ENST00000443443 SBSPONQ8IVN8 264 aa2.72□□□□□ -1.97
VPS50-206ENST00000443443 OR8B3Q8NGG8 313 aa2.72□□□□□ -1.97
VPS50-206ENST00000443443 DYNLRB2Q8TF09 96 aa2.72□□□□□ -1.97
VPS50-206ENST00000443443 DPH3P1Q9H4G8 78 aa2.72□□□□□ -1.97
VPS50-206ENST00000443443 POLEQ07864 2286 aa2.72□□□□□ -1.97
VPS50-206ENST00000443443 RBBP6Q7Z6E9 1792 aaKnown RBP2.72□□□□□ -1.97
VPS50-206ENST00000443443 GAPVD1Q14C86 1478 aa2.71□□□□□ -1.97
VPS50-206ENST00000443443 SCAF11Q99590 1463 aaKnown RBP2.71□□□□□ -1.97
VPS50-206ENST00000443443 MYH9P35579 1960 aaKnown RBP2.71□□□□□ -1.98
VPS50-206ENST00000443443 UACAQ9BZF9 1416 aa2.71□□□□□ -1.98
VPS50-206ENST00000443443 IGLV10-54A0A075B6I4 117 aa2.71□□□□□ -1.98
VPS50-206ENST00000443443 IGKV2D-24A0A075B6R9 120 aa2.71□□□□□ -1.98
VPS50-206ENST00000443443 E7EUB6 86 aa2.71□□□□□ -1.98
VPS50-206ENST00000443443 GNGT2O14610 69 aa2.71□□□□□ -1.98
VPS50-206ENST00000443443 ASIPP42127 132 aa2.71□□□□□ -1.98
VPS50-206ENST00000443443 FAM19A2Q8N3H0 131 aa2.71□□□□□ -1.98
VPS50-206ENST00000443443 S100A13Q99584 98 aa2.71□□□□□ -1.98
VPS50-206ENST00000443443 NPVFQ9HCQ7 196 aa2.71□□□□□ -1.98
VPS50-206ENST00000443443 MYH6P13533 1939 aa2.71□□□□□ -1.98
VPS50-206ENST00000443443 KIF26AQ9ULI4 1882 aaPredicted RBP2.71□□□□□ -1.98
VPS50-206ENST00000443443 MYO5AQ9Y4I1 1855 aaKnown RBP2.71□□□□□ -1.98
VPS50-206ENST00000443443 PLEKHH2Q8IVE3 1493 aa2.71□□□□□ -1.98
VPS50-206ENST00000443443 ABCC3O15438 1527 aa2.7□□□□□ -1.98
VPS50-206ENST00000443443 TRAV2A0A0B4J234 112 aa2.7□□□□□ -1.98
VPS50-206ENST00000443443 ERC2-IT1O76042 136 aa2.7□□□□□ -1.98
VPS50-206ENST00000443443 GYPAP02724 150 aa2.7□□□□□ -1.98
VPS50-206ENST00000443443 MIFP14174 115 aa2.7□□□□□ -1.98
VPS50-206ENST00000443443 ADCYAP1P18509 176 aa2.7□□□□□ -1.98
VPS50-206ENST00000443443 HINT1P49773 126 aaPredicted RBP2.7□□□□□ -1.98
VPS50-206ENST00000443443 POLR2JP52435 117 aaKnown RBP2.7□□□□□ -1.98
VPS50-206ENST00000443443 RPL26P61254 145 aaKnown RBP2.7□□□□□ -1.98
VPS50-206ENST00000443443 ERHP84090 104 aaKnown RBP2.7□□□□□ -1.98
VPS50-206ENST00000443443 EIF4EBP1Q13541 118 aaPredicted RBP2.7□□□□□ -1.98
VPS50-206ENST00000443443 KPRPQ5T749 579 aaPredicted RBP2.7□□□□□ -1.98
VPS50-206ENST00000443443 RPL7L1Q6DKI1 246 aaKnown RBP2.7□□□□□ -1.98
VPS50-206ENST00000443443 LINC00269Q8N2A0 174 aa2.7□□□□□ -1.98
VPS50-206ENST00000443443 Q8N8P6 123 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms