RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SCGB1D2O95969 90 aa9.51□□□□□ -0.89
HMGN1-208ENST00000443046 MBPP02686 304 aaPredicted RBP9.51□□□□□ -0.89
HMGN1-208ENST00000443046 PYYP10082 97 aa9.51□□□□□ -0.89
HMGN1-208ENST00000443046 RAB31Q13636 194 aa9.51□□□□□ -0.89
HMGN1-208ENST00000443046 IAH1Q2TAA2 248 aaPredicted RBP9.51□□□□□ -0.89
HMGN1-208ENST00000443046 VWC2Q2TAL6 325 aa9.51□□□□□ -0.89
HMGN1-208ENST00000443046 SCXQ7RTU7 201 aa9.51□□□□□ -0.89
HMGN1-208ENST00000443046 BCL7BQ9BQE9 202 aa9.51□□□□□ -0.89
HMGN1-208ENST00000443046 SLC25A31Q9H0C2 315 aa9.51□□□□□ -0.89
HMGN1-208ENST00000443046 Q9HAA7 133 aa9.51□□□□□ -0.89
HMGN1-208ENST00000443046 SLC39A9Q9NUM3 307 aa9.51□□□□□ -0.89
HMGN1-208ENST00000443046 BOLA1Q9Y3E2 137 aa9.51□□□□□ -0.89
HMGN1-208ENST00000443046 TIMM9Q9Y5J7 89 aa9.51□□□□□ -0.89
HMGN1-208ENST00000443046 ZNF138P52744 262 aa9.5□□□□□ -0.89
HMGN1-208ENST00000443046 TMBIM6P55061 237 aa9.5□□□□□ -0.89
HMGN1-208ENST00000443046 ZNF266Q14584 549 aa9.5□□□□□ -0.89
HMGN1-208ENST00000443046 LAGE3Q14657 143 aa9.5□□□□□ -0.89
HMGN1-208ENST00000443046 PYDC2Q56P42 97 aa9.5□□□□□ -0.89
HMGN1-208ENST00000443046 NDUFB6O95139 128 aa9.49□□□□□ -0.89
HMGN1-208ENST00000443046 GATA1P15976 413 aaPredicted RBP9.49□□□□□ -0.89
HMGN1-208ENST00000443046 ZNF846Q147U1 533 aa9.49□□□□□ -0.89
HMGN1-208ENST00000443046 MUC21Q5SSG8 566 aa9.49□□□□□ -0.89
HMGN1-208ENST00000443046 Q6AWC8 147 aa9.49□□□□□ -0.89
HMGN1-208ENST00000443046 C11orf1Q9H5F2 150 aa9.49□□□□□ -0.89
HMGN1-208ENST00000443046 AAMDCQ9H7C9 122 aa9.49□□□□□ -0.89
HMGN1-208ENST00000443046 FLVCR2Q9UPI3 526 aa9.49□□□□□ -0.89
HMGN1-208ENST00000443046 TNXBP22105 4242 aa9.48□□□□□ -0.89
HMGN1-208ENST00000443046 TDRG1Q3Y452 100 aa9.48□□□□□ -0.89
HMGN1-208ENST00000443046 FAM122CQ6P4D5 195 aa9.48□□□□□ -0.89
HMGN1-208ENST00000443046 OR4C5Q8NGB2 326 aa9.48□□□□□ -0.89
HMGN1-208ENST00000443046 Q8TAT8 98 aa9.48□□□□□ -0.89
HMGN1-208ENST00000443046 TM2D2Q9BX73 214 aa9.48□□□□□ -0.89
HMGN1-208ENST00000443046 MRPS26Q9BYN8 205 aaKnown RBP9.48□□□□□ -0.89
HMGN1-208ENST00000443046 UQCC1Q9NVA1 299 aa9.48□□□□□ -0.89
HMGN1-208ENST00000443046 GSKIPQ9P0R6 139 aa9.48□□□□□ -0.89
HMGN1-208ENST00000443046 TRAV8-6A0A0B4J262 113 aa9.47□□□□□ -0.89
HMGN1-208ENST00000443046 PFN1P07737 140 aaKnown RBP9.47□□□□□ -0.89
HMGN1-208ENST00000443046 PPT1P50897 306 aa9.47□□□□□ -0.89
HMGN1-208ENST00000443046 TMEM183BQ1AE95 376 aa9.47□□□□□ -0.89
HMGN1-208ENST00000443046 TMEM183AQ8IXX5 376 aa9.47□□□□□ -0.89
HMGN1-208ENST00000443046 NHLRC2Q8NBF2 726 aa9.47□□□□□ -0.89
HMGN1-208ENST00000443046 FAM167A-AS1Q96KT0 104 aa9.47□□□□□ -0.89
HMGN1-208ENST00000443046 CHAC1Q9BUX1 264 aa9.47□□□□□ -0.89
HMGN1-208ENST00000443046 SLC25A2Q9BXI2 301 aa9.47□□□□□ -0.89
HMGN1-208ENST00000443046 C20orf85Q9H1P6 137 aa9.47□□□□□ -0.89
HMGN1-208ENST00000443046 TRGV11A0A075B6L2 103 aa9.46□□□□□ -0.9
HMGN1-208ENST00000443046 RBAKDNA6NC62 111 aa9.46□□□□□ -0.9
HMGN1-208ENST00000443046 CST7O76096 145 aa9.46□□□□□ -0.9
HMGN1-208ENST00000443046 IGHV3-30P01768 117 aa9.46□□□□□ -0.9
HMGN1-208ENST00000443046 IGHV3-33P01772 117 aa9.46□□□□□ -0.9
HMGN1-208ENST00000443046 IGHV3-30-3P0DP02 117 aa9.46□□□□□ -0.9
HMGN1-208ENST00000443046 IGHV3-30-5P0DP03 117 aa9.46□□□□□ -0.9
HMGN1-208ENST00000443046 ASAH1Q13510 395 aa9.46□□□□□ -0.9
HMGN1-208ENST00000443046 OR10J3Q5JRS4 329 aa9.46□□□□□ -0.9
HMGN1-208ENST00000443046 LELP1Q5T871 98 aa9.46□□□□□ -0.9
HMGN1-208ENST00000443046 MITD1Q8WV92 249 aa9.46□□□□□ -0.9
HMGN1-208ENST00000443046 M0R2P5 195 aa9.45□□□□□ -0.9
HMGN1-208ENST00000443046 NBEAP1P0C6P0 100 aa9.45□□□□□ -0.9
HMGN1-208ENST00000443046 LINC01620Q4KN68 170 aa9.45□□□□□ -0.9
HMGN1-208ENST00000443046 GCSAMLQ5JQS6 135 aa9.45□□□□□ -0.9
HMGN1-208ENST00000443046 FAM159AQ6UWV7 190 aa9.45□□□□□ -0.9
HMGN1-208ENST00000443046 CIRBP-AS1Q8TBR5 109 aa9.45□□□□□ -0.9
HMGN1-208ENST00000443046 IGHV3-16A0A0C4DH30 117 aa9.44□□□□□ -0.9
HMGN1-208ENST00000443046 NAP1L6A6NFF2 107 aa9.44□□□□□ -0.9
HMGN1-208ENST00000443046 FAM24AA6NFZ4 105 aa9.44□□□□□ -0.9
HMGN1-208ENST00000443046 H3BMQ9 156 aa9.44□□□□□ -0.9
HMGN1-208ENST00000443046 L7N2F9 121 aa9.44□□□□□ -0.9
HMGN1-208ENST00000443046 VAMP2P63027 116 aa9.44□□□□□ -0.9
HMGN1-208ENST00000443046 BAK1Q16611 211 aa9.44□□□□□ -0.9
HMGN1-208ENST00000443046 SLC25A29Q8N8R3 303 aa9.44□□□□□ -0.9
HMGN1-208ENST00000443046 FXYD5Q96DB9 178 aa9.44□□□□□ -0.9
HMGN1-208ENST00000443046 GPN1Q9HCN4 374 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-208ENST00000443046 LENEPQ9Y5L5 61 aa9.44□□□□□ -0.9
HMGN1-208ENST00000443046 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.43□□□□□ -0.9
HMGN1-208ENST00000443046 UBE2L5PA0A1B0GUS4 154 aa9.43□□□□□ -0.9
HMGN1-208ENST00000443046 LECT2O14960 151 aa9.43□□□□□ -0.9
HMGN1-208ENST00000443046 GNRH2O43555 120 aa9.43□□□□□ -0.9
HMGN1-208ENST00000443046 S100A11P31949 105 aa9.43□□□□□ -0.9
HMGN1-208ENST00000443046 SULT1A1P50225 295 aa9.43□□□□□ -0.9
HMGN1-208ENST00000443046 BCAP31P51572 246 aa9.43□□□□□ -0.9
HMGN1-208ENST00000443046 CAV2P51636 162 aa9.43□□□□□ -0.9
HMGN1-208ENST00000443046 BAXQ07812 192 aa9.43□□□□□ -0.9
HMGN1-208ENST00000443046 MIR17HGQ75NE6 70 aa9.43□□□□□ -0.9
HMGN1-208ENST00000443046 Q8N3U1 123 aa9.43□□□□□ -0.9
HMGN1-208ENST00000443046 TRAV8-3A0A0A6YYJ7 113 aa9.42□□□□□ -0.9
HMGN1-208ENST00000443046 TRBV6-4A0A1B0GX49 114 aa9.42□□□□□ -0.9
HMGN1-208ENST00000443046 IGLV2-8P01709 118 aa9.42□□□□□ -0.9
HMGN1-208ENST00000443046 FGF7P21781 194 aa9.42□□□□□ -0.9
HMGN1-208ENST00000443046 BTCP35070 178 aa9.42□□□□□ -0.9
HMGN1-208ENST00000443046 PHYHIPLQ96FC7 376 aa9.42□□□□□ -0.9
HMGN1-208ENST00000443046 GTSF1LQ9H1H1 148 aa9.42□□□□□ -0.9
HMGN1-208ENST00000443046 OR51M1Q9H341 326 aa9.42□□□□□ -0.9
HMGN1-208ENST00000443046 LYRM2Q9NU23 88 aaPredicted RBP9.42□□□□□ -0.9
HMGN1-208ENST00000443046 LSM5Q9Y4Y9 91 aaKnown RBP9.42□□□□□ -0.9
HMGN1-208ENST00000443046 RNF222A6NCQ9 220 aa9.41□□□□□ -0.9
HMGN1-208ENST00000443046 FBLL1A6NHQ2 334 aaKnown RBP9.41□□□□□ -0.9
HMGN1-208ENST00000443046 TMED6Q8WW62 240 aa9.41□□□□□ -0.9
HMGN1-208ENST00000443046 BAALCQ8WXS3 180 aa9.41□□□□□ -0.9
HMGN1-208ENST00000443046 NPCDR1Q9BY65 106 aa9.41□□□□□ -0.9
HMGN1-208ENST00000443046 IGSF23A1L1A6 192 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms