RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 CCL20P78556 96 aa8.84□□□□□ -0.99
USP1-203ENST00000442679 CCDC28AQ8IWP9 274 aa8.84□□□□□ -0.99
USP1-203ENST00000442679 TREM1Q9NP99 234 aa8.84□□□□□ -0.99
USP1-203ENST00000442679 CELA1Q9UNI1 258 aa8.84□□□□□ -0.99
USP1-203ENST00000442679 PSG8Q9UQ74 426 aa8.84□□□□□ -0.99
USP1-203ENST00000442679 ARL2-SNX15V9GYD0 113 aa8.84□□□□□ -0.99
USP1-203ENST00000442679 PLECQ15149 4684 aaKnown RBP8.84□□□□□ -0.99
USP1-203ENST00000442679 PEX7O00628 323 aa8.83□□□□□ -1
USP1-203ENST00000442679 IGLV2-11P01706 119 aa8.83□□□□□ -1
USP1-203ENST00000442679 ALKAL2Q6UX46 152 aa8.83□□□□□ -1
USP1-203ENST00000442679 Q6ZQT7 251 aa8.83□□□□□ -1
USP1-203ENST00000442679 ZNF493Q6ZR52 646 aa8.83□□□□□ -1
USP1-203ENST00000442679 PRNTQ86SH4 94 aa8.83□□□□□ -1
USP1-203ENST00000442679 TMEM75Q8N9X5 138 aa8.83□□□□□ -1
USP1-203ENST00000442679 HIST1H2BAQ96A08 127 aa8.83□□□□□ -1
USP1-203ENST00000442679 TVP23CQ96ET8 276 aa8.83□□□□□ -1
USP1-203ENST00000442679 LINC00479Q96M42 142 aa8.83□□□□□ -1
USP1-203ENST00000442679 PYGO2Q9BRQ0 406 aa8.83□□□□□ -1
USP1-203ENST00000442679 NDFIP1Q9BT67 221 aa8.83□□□□□ -1
USP1-203ENST00000442679 DKK2Q9UBU2 259 aa8.83□□□□□ -1
USP1-203ENST00000442679 TRAV34A0A0B4J273 112 aa8.82□□□□□ -1
USP1-203ENST00000442679 FBLL1A6NHQ2 334 aaKnown RBP8.82□□□□□ -1
USP1-203ENST00000442679 F6UZH7 168 aa8.82□□□□□ -1
USP1-203ENST00000442679 ATP5G3P48201 142 aa8.82□□□□□ -1
USP1-203ENST00000442679 FLI1Q01543 452 aaPredicted RBP8.82□□□□□ -1
USP1-203ENST00000442679 C12orf74Q32Q52 190 aa8.82□□□□□ -1
USP1-203ENST00000442679 FAM222AQ5U5X8 452 aa8.82□□□□□ -1
USP1-203ENST00000442679 ZNF767PQ75MW2 155 aa8.82□□□□□ -1
USP1-203ENST00000442679 PHLDA1Q8WV24 401 aaPredicted RBP8.82□□□□□ -1
USP1-203ENST00000442679 C16orf74Q96GX8 76 aa8.82□□□□□ -1
USP1-203ENST00000442679 LINC00467Q9BRT7 94 aa8.82□□□□□ -1
USP1-203ENST00000442679 TCEAL7Q9BRU2 100 aa8.82□□□□□ -1
USP1-203ENST00000442679 GNG13Q9P2W3 67 aa8.82□□□□□ -1
USP1-203ENST00000442679 TEX48A0A1B0GUV7 120 aa8.81□□□□□ -1
USP1-203ENST00000442679 PLAC8L1A1L4L8 177 aa8.81□□□□□ -1
USP1-203ENST00000442679 CBY3A6NI87 242 aa8.81□□□□□ -1
USP1-203ENST00000442679 RGS13O14921 159 aa8.81□□□□□ -1
USP1-203ENST00000442679 CEMP1Q6PRD7 247 aaPredicted RBP8.81□□□□□ -1
USP1-203ENST00000442679 Q6ZTC4 211 aa8.81□□□□□ -1
USP1-203ENST00000442679 EIF4E3Q8N5X7 224 aaKnown RBP8.81□□□□□ -1
USP1-203ENST00000442679 RNASE8Q8TDE3 154 aaKnown RBP8.81□□□□□ -1
USP1-203ENST00000442679 TMEM263Q8WUH6 116 aaKnown RBP8.81□□□□□ -1
USP1-203ENST00000442679 MANBALQ9NQG1 85 aa8.81□□□□□ -1
USP1-203ENST00000442679 LYSTQ99698 3801 aa8.8□□□□□ -1
USP1-203ENST00000442679 IGHV1OR15-1A0A075B7D0 117 aa8.8□□□□□ -1
USP1-203ENST00000442679 NUPR2A6NF83 97 aa8.8□□□□□ -1
USP1-203ENST00000442679 LYRM9A8MSI8 78 aa8.8□□□□□ -1
USP1-203ENST00000442679 C11orf94C9JXX5 98 aa8.8□□□□□ -1
USP1-203ENST00000442679 ANXA2RQ3ZCQ2 193 aa8.8□□□□□ -1
USP1-203ENST00000442679 SAPCD1Q5SSQ6 148 aa8.8□□□□□ -1
USP1-203ENST00000442679 Q6AWC8 147 aa8.8□□□□□ -1
USP1-203ENST00000442679 C8orf49Q96NF6 230 aa8.8□□□□□ -1
USP1-203ENST00000442679 TIMM8BQ9Y5J9 83 aaPredicted RBP8.8□□□□□ -1
USP1-203ENST00000442679 TRAV21A0A0B4J279 112 aa8.79□□□□□ -1
USP1-203ENST00000442679 SNURFLB1AK76 121 aa8.79□□□□□ -1
USP1-203ENST00000442679 BLOC1S1P78537 153 aa8.79□□□□□ -1
USP1-203ENST00000442679 SMUG1Q53HV7 270 aa8.79□□□□□ -1
USP1-203ENST00000442679 MUC21Q5SSG8 566 aa8.79□□□□□ -1
USP1-203ENST00000442679 ZNF680Q8NEM1 530 aa8.79□□□□□ -1
USP1-203ENST00000442679 FMC1Q96HJ9 113 aa8.79□□□□□ -1
USP1-203ENST00000442679 NOP10Q9NPE3 64 aaKnown RBP8.79□□□□□ -1
USP1-203ENST00000442679 TP53TG3Q9ULZ0 132 aa8.79□□□□□ -1
USP1-203ENST00000442679 KLK5Q9Y337 293 aaPredicted RBP8.79□□□□□ -1
USP1-203ENST00000442679 KLF12Q9Y4X4 402 aa8.79□□□□□ -1
USP1-203ENST00000442679 TRAV10A0A0B4J240 114 aa8.78□□□□□ -1
USP1-203ENST00000442679 GCGP01275 180 aa8.78□□□□□ -1
USP1-203ENST00000442679 IFNA1P01562 189 aa8.78□□□□□ -1
USP1-203ENST00000442679 DEFB130BP0DP73 79 aa8.78□□□□□ -1
USP1-203ENST00000442679 DEFB130AP0DP74 79 aa8.78□□□□□ -1
USP1-203ENST00000442679 AKR1C3P42330 323 aa8.78□□□□□ -1
USP1-203ENST00000442679 ZNF80P51504 273 aaPredicted RBP8.78□□□□□ -1
USP1-203ENST00000442679 DAD1P61803 113 aa8.78□□□□□ -1
USP1-203ENST00000442679 UBE2G1P62253 170 aa8.78□□□□□ -1
USP1-203ENST00000442679 FAM159AQ6UWV7 190 aa8.78□□□□□ -1
USP1-203ENST00000442679 Q86TA4 180 aa8.78□□□□□ -1
USP1-203ENST00000442679 GSN-AS1Q9NRJ2 163 aa8.78□□□□□ -1
USP1-203ENST00000442679 NAGKQ9UJ70 344 aa8.78□□□□□ -1
USP1-203ENST00000442679 TENM2Q9NT68 2774 aa8.78□□□□□ -1
USP1-203ENST00000442679 TRBV6-1A0A0K0K1D8 114 aa8.77□□□□□ -1.01
USP1-203ENST00000442679 SCO2A0A1W2PP80 73 aa8.77□□□□□ -1.01
USP1-203ENST00000442679 S100A9P06702 114 aaKnown RBP8.77□□□□□ -1.01
USP1-203ENST00000442679 TMEM183BQ1AE95 376 aa8.77□□□□□ -1.01
USP1-203ENST00000442679 C11orf72Q8NBR9 251 aa8.77□□□□□ -1.01
USP1-203ENST00000442679 C2CD4CQ8TF44 421 aa8.77□□□□□ -1.01
USP1-203ENST00000442679 TXNDC17Q9BRA2 123 aa8.77□□□□□ -1.01
USP1-203ENST00000442679 ZFP30Q9Y2G7 519 aa8.77□□□□□ -1.01
USP1-203ENST00000442679 KMT2CQ8NEZ4 4911 aaKnown RBP8.77□□□□□ -1.01
USP1-203ENST00000442679 DEFB131BA0A096LNP1 70 aa8.76□□□□□ -1.01
USP1-203ENST00000442679 PFN1P07737 140 aaKnown RBP8.76□□□□□ -1.01
USP1-203ENST00000442679 DAZ2Q13117 558 aaKnown RBP8.76□□□□□ -1.01
USP1-203ENST00000442679 TMEM183AQ8IXX5 376 aa8.76□□□□□ -1.01
USP1-203ENST00000442679 TRGV11A0A075B6L2 103 aa8.75□□□□□ -1.01
USP1-203ENST00000442679 IGLL5B9A064 214 aa8.75□□□□□ -1.01
USP1-203ENST00000442679 GNRH2O43555 120 aa8.75□□□□□ -1.01
USP1-203ENST00000442679 LTAP01374 205 aa8.75□□□□□ -1.01
USP1-203ENST00000442679 BCL2P10415 239 aa8.75□□□□□ -1.01
USP1-203ENST00000442679 HTN3P15516 51 aa8.75□□□□□ -1.01
USP1-203ENST00000442679 TAGLN2P37802 199 aaKnown RBP8.75□□□□□ -1.01
USP1-203ENST00000442679 MEF2BQ02080 365 aaPredicted RBP8.75□□□□□ -1.01
USP1-203ENST00000442679 TDRG1Q3Y452 100 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms