RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 EXPH5Q8NEV8 1989 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 C15orf61A6NNL5 157 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 ARHGAP32A7KAX9 2087 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 A0A087WVE0 104 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 LRCOL1A6NCL2 159 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 H7C423 109 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 TMEM75Q8N9X5 138 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 IGHV3-15A0A0B4J1V0 119 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 LMO7DNF2Z398 122 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 IGF1P05019 195 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 LINC00482Q8N8I6 264 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 TSC2P49815 1807 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 PATE4P0C8F1 98 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 GDF5OSQ5U4N7 250 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 CASC2Q6XLA1 102 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 TET1Q8NFU7 2136 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 DOPEY2Q9Y3R5 2298 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 DOCK10Q96BY6 2186 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 TRGV8A0A0C4DH27 118 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 H0Y8X5 98 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 GRNP28799 593 aaKnown RBP4.36□□□□□ -1.71
PTPRC-209ENST00000442510 PIP4P1Q86T03 277 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 ZNF706Q9Y5V0 76 aaPredicted RBP4.36□□□□□ -1.71
PTPRC-209ENST00000442510 LY75O60449 1722 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 DDX60LQ5H9U9 1706 aaKnown RBP4.36□□□□□ -1.71
PTPRC-209ENST00000442510 TOGARAM1Q9Y4F4 1720 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 C4orf51C9J302 202 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 APELAP0DMC3 54 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 IGHV1-8P0DP01 117 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 ZNF672Q499Z4 452 aaPredicted RBP4.36□□□□□ -1.71
PTPRC-209ENST00000442510 SUMO4Q6EEV6 95 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 TMEM61Q8N0U2 210 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 C17orf77Q96MU5 243 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 DOCK5Q9H7D0 1870 aa4.36□□□□□ -1.71
PTPRC-209ENST00000442510 LST1O00453 97 aa4.35□□□□□ -1.71
PTPRC-209ENST00000442510 SBSPONQ8IVN8 264 aa4.35□□□□□ -1.71
PTPRC-209ENST00000442510 RBM12B-AS1Q9P1G2 102 aa4.35□□□□□ -1.71
PTPRC-209ENST00000442510 DNAJC13O75165 2243 aa4.35□□□□□ -1.71
PTPRC-209ENST00000442510 SPINK2P20155 84 aa4.35□□□□□ -1.71
PTPRC-209ENST00000442510 LCA10Q71F78 164 aa4.35□□□□□ -1.71
PTPRC-209ENST00000442510 DEFB108BQ8NET1 73 aa4.35□□□□□ -1.71
PTPRC-209ENST00000442510 PATJQ8NI35 1801 aa4.35□□□□□ -1.71
PTPRC-209ENST00000442510 DDX60Q8IY21 1712 aaKnown RBP4.35□□□□□ -1.71
PTPRC-209ENST00000442510 UBE2D1P51668 147 aa4.35□□□□□ -1.71
PTPRC-209ENST00000442510 CFHR3Q02985 330 aa4.35□□□□□ -1.71
PTPRC-209ENST00000442510 CDSNQ15517 529 aa4.35□□□□□ -1.71
PTPRC-209ENST00000442510 LINC00114Q6XXX2 140 aa4.35□□□□□ -1.71
PTPRC-209ENST00000442510 Q8N6K4 173 aa4.35□□□□□ -1.71
PTPRC-209ENST00000442510 KLF16Q9BXK1 252 aaPredicted RBP4.35□□□□□ -1.71
PTPRC-209ENST00000442510 A0A1W2PQD3 144 aa4.35□□□□□ -1.71
PTPRC-209ENST00000442510 LINC00271P0C7V0 271 aa4.35□□□□□ -1.71
PTPRC-209ENST00000442510 CRIP2P52943 208 aaPredicted RBP4.35□□□□□ -1.71
PTPRC-209ENST00000442510 PRR15LQ9BU68 103 aa4.35□□□□□ -1.71
PTPRC-209ENST00000442510 LRP5O75197 1615 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 A0A0J9YY99 117 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 CCL24O00175 119 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 IGFBP6P24592 240 aaPredicted RBP4.34□□□□□ -1.71
PTPRC-209ENST00000442510 RPL36AP83881 106 aaKnown RBP4.34□□□□□ -1.71
PTPRC-209ENST00000442510 RPL36ALQ969Q0 106 aaKnown RBP4.34□□□□□ -1.71
PTPRC-209ENST00000442510 RREB1Q92766 1687 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 FAM223BA6NKX1 122 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 TNFRSF13BO14836 293 aaPredicted RBP4.34□□□□□ -1.71
PTPRC-209ENST00000442510 FAM27BQ5VT28 67 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 LYPD1Q8N2G4 141 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 ANKRD36A6QL64 1941 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 A0A087WZ39 114 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 A0A0G2JNJ9 132 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 ITGBL1O95965 494 aaPredicted RBP4.34□□□□□ -1.71
PTPRC-209ENST00000442510 IGKV1D-16P01601 117 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 PRCDQ00LT1 54 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 Q6ZS52 159 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 FAM19A3Q7Z5A8 133 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 PRR15Q8IV56 129 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 IMMP1LQ96LU5 166 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 Q9UFV3 132 aa4.34□□□□□ -1.71
PTPRC-209ENST00000442510 PHF3Q92576 2039 aaKnown RBP4.34□□□□□ -1.72
PTPRC-209ENST00000442510 ASXL3Q9C0F0 2248 aa4.34□□□□□ -1.72
PTPRC-209ENST00000442510 I3L3M4 83 aa4.34□□□□□ -1.72
PTPRC-209ENST00000442510 EFNA2O43921 213 aa4.34□□□□□ -1.72
PTPRC-209ENST00000442510 PDE6HQ13956 83 aa4.34□□□□□ -1.72
PTPRC-209ENST00000442510 DEFB127Q9H1M4 99 aa4.34□□□□□ -1.72
PTPRC-209ENST00000442510 TANC1Q9C0D5 1861 aa4.34□□□□□ -1.72
PTPRC-209ENST00000442510 PCDH15Q96QU1 1955 aa4.34□□□□□ -1.72
PTPRC-209ENST00000442510 FHL3Q13643 280 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 PIK3CD-AS1Q5SR53 167 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 LINC00269Q8N2A0 174 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 LEAP2Q969E1 77 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 TDRD15B5MCY1 1934 aaKnown RBP4.33□□□□□ -1.72
PTPRC-209ENST00000442510 C9orf139Q6ZV77 190 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 ZCCHC24Q8N2G6 241 aaKnown RBP4.33□□□□□ -1.72
PTPRC-209ENST00000442510 RMI2Q96E14 147 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 RICTORQ6R327 1708 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 SCN7AQ01118 1682 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 ALS2Q96Q42 1657 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 CADP27708 2225 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 DOCK1Q14185 1865 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 IGHV1-69DA0A0B4J2H0 117 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 IGLV3-27P01718 113 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 C20orf204Q6ZNR8 217 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 NEXN-AS1Q8NBZ9 246 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms