RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 ZNF253O75346 499 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 ATP6V1G1O75348 118 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 IFNA1P01562 189 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 GALR1P47211 349 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 RANP62826 216 aaKnown RBP3.49□□□□□ -1.85
PTPN4-206ENST00000441089 PEA15Q15121 130 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 DEFB114Q30KQ6 69 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 UQCC3Q6UW78 93 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 LINC00322Q6ZN03 302 aaPredicted RBP3.49□□□□□ -1.85
PTPN4-206ENST00000441089 TCF24Q7RTU0 167 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 GBGT1Q8N5D6 347 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 FAM24BQ8N5W8 94 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 RNF182Q8N6D2 247 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 DCANP1Q8TF63 244 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 PHLDA1Q8WV24 401 aaPredicted RBP3.49□□□□□ -1.85
PTPN4-206ENST00000441089 C11orf52Q96A22 123 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 LINC00052Q96N35 136 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 GPR82Q96P67 336 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 EIF5A2Q9GZV4 153 aaKnown RBP3.49□□□□□ -1.85
PTPN4-206ENST00000441089 TREM1Q9NP99 234 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 MANBALQ9NQG1 85 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 PEMTQ9UBM1 199 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 ARL2-SNX15V9GYD0 113 aa3.49□□□□□ -1.85
PTPN4-206ENST00000441089 LRP1BQ9NZR2 4599 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 ZNF705FA8MVS1 300 aaPredicted RBP3.48□□□□□ -1.85
PTPN4-206ENST00000441089 C16orf90A8MZG2 172 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 PRAC2D3DTV9 90 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 K7EQG2 157 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 RTL8CO15255 209 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 IGLV1-51P01701 117 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 SFTA3P0C7M3 94 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 S100A7P31151 101 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 TFPI2P48307 235 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 PPT1P50897 306 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 DEFB1P60022 68 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 MEF2BQ02080 365 aaPredicted RBP3.48□□□□□ -1.85
PTPN4-206ENST00000441089 PDE6HQ13956 83 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 SERTAD4-AS1Q5TG53 156 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 CST9LP1Q5W188 147 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 S100A7AQ86SG5 101 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 TMEM61Q8N0U2 210 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 CYB561D1Q8N8Q1 229 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 C2CD4CQ8TF44 421 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 GRAMD2BQ96HH9 432 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 NARS2Q96I59 477 aaKnown RBP3.48□□□□□ -1.85
PTPN4-206ENST00000441089 LINC00479Q96M42 142 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 DERL1Q9BUN8 251 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 MS4A6AQ9H2W1 248 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 OTORQ9NRC9 128 aa3.48□□□□□ -1.85
PTPN4-206ENST00000441089 VPS13BQ7Z7G8 4022 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 TRBV20OR9-2A0A075B6H5 130 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 IGKV2-40A0A087WW87 121 aaPredicted RBP3.47□□□□□ -1.85
PTPN4-206ENST00000441089 TRAV8-1A0A0A6YYK1 113 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 TRAV34A0A0B4J273 112 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 A0A0J9YWU9 116 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 HELTA6NFD8 242 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 F6UZH7 168 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 TMEM250H0YL14 139 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 PEX7O00628 323 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 NDUFS6O75380 124 aaKnown RBP3.47□□□□□ -1.85
PTPN4-206ENST00000441089 IGKV2D-40P01614 121 aaPredicted RBP3.47□□□□□ -1.85
PTPN4-206ENST00000441089 IGLV2-11P01706 119 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 TCRAP04437 139 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 SLC25A5P05141 298 aaKnown RBP3.47□□□□□ -1.85
PTPN4-206ENST00000441089 NPSP0C0P6 89 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 BMI1P35226 326 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 TAGLN2P37802 199 aaKnown RBP3.47□□□□□ -1.85
PTPN4-206ENST00000441089 PSG9Q00887 426 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 PSG3Q16557 428 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 SOHLH1Q5JUK2 328 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 C10orf91Q5T1B1 145 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 LYPD1Q8N2G4 141 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 C5orf17Q8NAS9 161 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 DYNLRB2Q8TF09 96 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 RPL36ALQ969Q0 106 aaKnown RBP3.47□□□□□ -1.85
PTPN4-206ENST00000441089 RPUSD4Q96CM3 377 aaKnown RBP3.47□□□□□ -1.85
PTPN4-206ENST00000441089 SGK494Q96LW2 274 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 IGF2BP2-AS1Q96M15 143 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 TXNDC17Q9BRA2 123 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 SLC50A1Q9BRV3 221 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 SLC35B3Q9H1N7 401 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 PARLQ9H300 379 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 SMDT1Q9H4I9 107 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 NRN1Q9NPD7 142 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 EPDR1Q9UM22 224 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 RPH3ALQ9UNE2 315 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 RNF24Q9Y225 148 aa3.47□□□□□ -1.85
PTPN4-206ENST00000441089 TRAV2A0A0B4J234 112 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 PGPEP1LA6NFU8 196 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 F6UB75 175 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 ISLRO14498 428 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 TSPAN4O14817 238 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 PDE6DO43924 150 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 IGLV2-8P01709 118 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 ZNF688P0C7X2 276 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 ZNF705DP0CH99 300 aaPredicted RBP3.46□□□□□ -1.86
PTPN4-206ENST00000441089 ZNF705BP0CI00 300 aaPredicted RBP3.46□□□□□ -1.86
PTPN4-206ENST00000441089 AKR1C3P42330 323 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 MEOX2P50222 304 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 187.7 ms