RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 C9JCJ5 164 aa9.5□□□□□ -0.89
PTPRN-205ENST00000440552 S100A11P31949 105 aa9.5□□□□□ -0.89
PTPRN-205ENST00000440552 INPP1P49441 399 aa9.5□□□□□ -0.89
PTPRN-205ENST00000440552 CAV2P51636 162 aa9.5□□□□□ -0.89
PTPRN-205ENST00000440552 ZNF138P52744 262 aa9.5□□□□□ -0.89
PTPRN-205ENST00000440552 ZNF266Q14584 549 aa9.5□□□□□ -0.89
PTPRN-205ENST00000440552 ZNF846Q147U1 533 aa9.5□□□□□ -0.89
PTPRN-205ENST00000440552 SPANXN2Q5MJ10 180 aa9.5□□□□□ -0.89
PTPRN-205ENST00000440552 BLNKQ8WV28 456 aa9.5□□□□□ -0.89
PTPRN-205ENST00000440552 BOLA1Q9Y3E2 137 aa9.5□□□□□ -0.89
PTPRN-205ENST00000440552 FAM24AA6NFZ4 105 aa9.49□□□□□ -0.89
PTPRN-205ENST00000440552 PSCAO43653 123 aa9.49□□□□□ -0.89
PTPRN-205ENST00000440552 SFTA3P0C7M3 94 aa9.49□□□□□ -0.89
PTPRN-205ENST00000440552 BTCP35070 178 aa9.49□□□□□ -0.89
PTPRN-205ENST00000440552 SULT1A1P50225 295 aa9.49□□□□□ -0.89
PTPRN-205ENST00000440552 BAXQ07812 192 aa9.49□□□□□ -0.89
PTPRN-205ENST00000440552 BAK1Q16611 211 aa9.49□□□□□ -0.89
PTPRN-205ENST00000440552 LINC01556Q5JQF7 62 aa9.49□□□□□ -0.89
PTPRN-205ENST00000440552 TRIQKQ629K1 86 aa9.49□□□□□ -0.89
PTPRN-205ENST00000440552 Q8N814 137 aa9.49□□□□□ -0.89
PTPRN-205ENST00000440552 LSM5Q9Y4Y9 91 aaKnown RBP9.49□□□□□ -0.89
PTPRN-205ENST00000440552 TRAV4A0A0B4J268 109 aa9.48□□□□□ -0.89
PTPRN-205ENST00000440552 IGHV3-38A0A0C4DH36 116 aa9.48□□□□□ -0.89
PTPRN-205ENST00000440552 UBE2L5PA0A1B0GUS4 154 aa9.48□□□□□ -0.89
PTPRN-205ENST00000440552 CENPXA8MT69 81 aa9.48□□□□□ -0.89
PTPRN-205ENST00000440552 IBA57-AS1B1ANH7 110 aa9.48□□□□□ -0.89
PTPRN-205ENST00000440552 PLA2G1BP04054 148 aaKnown RBP9.48□□□□□ -0.89
PTPRN-205ENST00000440552 ATP6V1FQ16864 119 aa9.48□□□□□ -0.89
PTPRN-205ENST00000440552 FAM122CQ6P4D5 195 aa9.48□□□□□ -0.89
PTPRN-205ENST00000440552 FAM167A-AS1Q96KT0 104 aa9.48□□□□□ -0.89
PTPRN-205ENST00000440552 SLC25A2Q9BXI2 301 aa9.48□□□□□ -0.89
PTPRN-205ENST00000440552 GPN1Q9HCN4 374 aaPredicted RBP9.48□□□□□ -0.89
PTPRN-205ENST00000440552 LYRM2Q9NU23 88 aaPredicted RBP9.48□□□□□ -0.89
PTPRN-205ENST00000440552 FAM30AQ9NZY2 134 aa9.48□□□□□ -0.89
PTPRN-205ENST00000440552 HMCN2Q8NDA2 5059 aa9.48□□□□□ -0.89
PTPRN-205ENST00000440552 TRGV11A0A075B6L2 103 aa9.47□□□□□ -0.89
PTPRN-205ENST00000440552 RBAKDNA6NC62 111 aa9.47□□□□□ -0.89
PTPRN-205ENST00000440552 CCSO14618 274 aa9.47□□□□□ -0.89
PTPRN-205ENST00000440552 NBEAP1P0C6P0 100 aa9.47□□□□□ -0.89
PTPRN-205ENST00000440552 PVALBP20472 110 aaPredicted RBP9.47□□□□□ -0.89
PTPRN-205ENST00000440552 FGF7P21781 194 aa9.47□□□□□ -0.89
PTPRN-205ENST00000440552 HBG1P69891 147 aa9.47□□□□□ -0.89
PTPRN-205ENST00000440552 HBG2P69892 147 aa9.47□□□□□ -0.89
PTPRN-205ENST00000440552 Q6AWC8 147 aa9.47□□□□□ -0.89
PTPRN-205ENST00000440552 TMEM252Q8N6L7 170 aa9.47□□□□□ -0.89
PTPRN-205ENST00000440552 TDRG1Q3Y452 100 aa9.46□□□□□ -0.9
PTPRN-205ENST00000440552 GCSAMLQ5JQS6 135 aa9.46□□□□□ -0.9
PTPRN-205ENST00000440552 MUC21Q5SSG8 566 aa9.46□□□□□ -0.9
PTPRN-205ENST00000440552 Q6ZSA8 131 aa9.46□□□□□ -0.9
PTPRN-205ENST00000440552 STX12Q86Y82 276 aa9.46□□□□□ -0.9
PTPRN-205ENST00000440552 Q8TAT8 98 aa9.46□□□□□ -0.9
PTPRN-205ENST00000440552 OR51M1Q9H341 326 aa9.46□□□□□ -0.9
PTPRN-205ENST00000440552 LENEPQ9Y5L5 61 aa9.46□□□□□ -0.9
PTPRN-205ENST00000440552 IGSF23A1L1A6 192 aa9.45□□□□□ -0.9
PTPRN-205ENST00000440552 TMEM183BQ1AE95 376 aa9.45□□□□□ -0.9
PTPRN-205ENST00000440552 FAM159AQ6UWV7 190 aa9.45□□□□□ -0.9
PTPRN-205ENST00000440552 MIR17HGQ75NE6 70 aa9.45□□□□□ -0.9
PTPRN-205ENST00000440552 TMEM183AQ8IXX5 376 aa9.45□□□□□ -0.9
PTPRN-205ENST00000440552 OR4C5Q8NGB2 326 aa9.45□□□□□ -0.9
PTPRN-205ENST00000440552 DEFB104AQ8WTQ1 72 aa9.45□□□□□ -0.9
PTPRN-205ENST00000440552 FXYD5Q96DB9 178 aa9.45□□□□□ -0.9
PTPRN-205ENST00000440552 C2orf50Q96LR7 162 aa9.45□□□□□ -0.9
PTPRN-205ENST00000440552 NPCDR1Q9BY65 106 aa9.45□□□□□ -0.9
PTPRN-205ENST00000440552 SLC25A31Q9H0C2 315 aa9.45□□□□□ -0.9
PTPRN-205ENST00000440552 TRAV8-6A0A0B4J262 113 aa9.44□□□□□ -0.9
PTPRN-205ENST00000440552 C5orf51A6NDU8 294 aa9.44□□□□□ -0.9
PTPRN-205ENST00000440552 FAM25EA8MYX2 175 aa9.44□□□□□ -0.9
PTPRN-205ENST00000440552 M0R2P5 195 aa9.44□□□□□ -0.9
PTPRN-205ENST00000440552 CSN1S1P47710 185 aa9.44□□□□□ -0.9
PTPRN-205ENST00000440552 PPT1P50897 306 aa9.44□□□□□ -0.9
PTPRN-205ENST00000440552 IL15RAQ13261 267 aa9.44□□□□□ -0.9
PTPRN-205ENST00000440552 SDHCQ99643 169 aaPredicted RBP9.44□□□□□ -0.9
PTPRN-205ENST00000440552 PAXXQ9BUH6 204 aa9.44□□□□□ -0.9
PTPRN-205ENST00000440552 LOC100131303A0A0U1RQF7 123 aa9.43□□□□□ -0.9
PTPRN-205ENST00000440552 PFN1P07737 140 aaKnown RBP9.43□□□□□ -0.9
PTPRN-205ENST00000440552 GATA1P15976 413 aaPredicted RBP9.43□□□□□ -0.9
PTPRN-205ENST00000440552 SERTAD4-AS1Q5TG53 156 aa9.43□□□□□ -0.9
PTPRN-205ENST00000440552 NHLRC2Q8NBF2 726 aa9.43□□□□□ -0.9
PTPRN-205ENST00000440552 TMED6Q8WW62 240 aa9.43□□□□□ -0.9
PTPRN-205ENST00000440552 PHYHIPLQ96FC7 376 aa9.43□□□□□ -0.9
PTPRN-205ENST00000440552 UBR4Q5T4S7 5183 aa9.42□□□□□ -0.9
PTPRN-205ENST00000440552 S100A10P60903 97 aa9.42□□□□□ -0.9
PTPRN-205ENST00000440552 LAGE3Q14657 143 aa9.42□□□□□ -0.9
PTPRN-205ENST00000440552 LINC00528Q8N1L1 170 aa9.42□□□□□ -0.9
PTPRN-205ENST00000440552 TM2D2Q9BX73 214 aa9.42□□□□□ -0.9
PTPRN-205ENST00000440552 Q9HAA7 133 aa9.42□□□□□ -0.9
PTPRN-205ENST00000440552 LRP1Q07954 4544 aaKnown RBP9.42□□□□□ -0.9
PTPRN-205ENST00000440552 IGHV3-16A0A0C4DH30 117 aa9.41□□□□□ -0.9
PTPRN-205ENST00000440552 OR10J4P0C629 311 aa9.41□□□□□ -0.9
PTPRN-205ENST00000440552 IL7P13232 177 aa9.41□□□□□ -0.9
PTPRN-205ENST00000440552 RAB32Q13637 225 aa9.41□□□□□ -0.9
PTPRN-205ENST00000440552 KCNIP2Q9NS61 270 aa9.41□□□□□ -0.9
PTPRN-205ENST00000440552 CCDC160A6NGH7 325 aa9.4□□□□□ -0.9
PTPRN-205ENST00000440552 DIRC3C9JPN6 131 aa9.4□□□□□ -0.9
PTPRN-205ENST00000440552 CIDEAO60543 219 aa9.4□□□□□ -0.9
PTPRN-205ENST00000440552 RANP62826 216 aaKnown RBP9.4□□□□□ -0.9
PTPRN-205ENST00000440552 OR10J3Q5JRS4 329 aa9.4□□□□□ -0.9
PTPRN-205ENST00000440552 LELP1Q5T871 98 aa9.4□□□□□ -0.9
PTPRN-205ENST00000440552 SYT8Q8NBV8 401 aa9.4□□□□□ -0.9
PTPRN-205ENST00000440552 PLA2G10O15496 165 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms