RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 GCGP01275 180 aa15.22■□□□□ 0.03
CHD3-204ENST00000439235 IGHV4-30-4P0DP06 118 aa15.22■□□□□ 0.03
CHD3-204ENST00000439235 RPL23P62829 140 aaKnown RBP15.22■□□□□ 0.03
CHD3-204ENST00000439235 ZC2HC1AQ96GY0 325 aa15.22■□□□□ 0.03
CHD3-204ENST00000439235 NOTCH3Q9UM47 2321 aa15.21■□□□□ 0.03
CHD3-204ENST00000439235 J3KRW8 73 aa15.21■□□□□ 0.03
CHD3-204ENST00000439235 PRR27Q6MZM9 219 aa15.21■□□□□ 0.03
CHD3-204ENST00000439235 C1QTNF4Q9BXJ3 329 aa15.21■□□□□ 0.03
CHD3-204ENST00000439235 AURKAIP1Q9NWT8 199 aaPredicted RBP15.21■□□□□ 0.03
CHD3-204ENST00000439235 C7orf71A4D174 169 aa15.2■□□□□ 0.02
CHD3-204ENST00000439235 A8MZ25 164 aa15.2■□□□□ 0.02
CHD3-204ENST00000439235 K7EN84 100 aa15.2■□□□□ 0.02
CHD3-204ENST00000439235 FXYD7P58549 80 aa15.2■□□□□ 0.02
CHD3-204ENST00000439235 SORL1Q92673 2214 aa15.19■□□□□ 0.02
CHD3-204ENST00000439235 TRAV21A0A0B4J279 112 aa15.19■□□□□ 0.02
CHD3-204ENST00000439235 ATP6V1G1O75348 118 aa15.19■□□□□ 0.02
CHD3-204ENST00000439235 INSP01308 110 aa15.19■□□□□ 0.02
CHD3-204ENST00000439235 APOC3P02656 99 aa15.19■□□□□ 0.02
CHD3-204ENST00000439235 RNASE4P34096 147 aaKnown RBP15.19■□□□□ 0.02
CHD3-204ENST00000439235 APOC4P55056 127 aa15.19■□□□□ 0.02
CHD3-204ENST00000439235 BTN1A1Q13410 526 aa15.19■□□□□ 0.02
CHD3-204ENST00000439235 FAM162BQ5T6X4 162 aa15.19■□□□□ 0.02
CHD3-204ENST00000439235 PRR9Q5T870 116 aa15.19■□□□□ 0.02
CHD3-204ENST00000439235 GFI1BQ5VTD9 330 aa15.19■□□□□ 0.02
CHD3-204ENST00000439235 SVBPQ8N300 66 aa15.19■□□□□ 0.02
CHD3-204ENST00000439235 TRAV12-2A0A075B6T6 113 aa15.18■□□□□ 0.02
CHD3-204ENST00000439235 KIR2DL5BA0A0G2JN68 375 aa15.18■□□□□ 0.02
CHD3-204ENST00000439235 KIR2DL5BA0A0G2JPC4 375 aa15.18■□□□□ 0.02
CHD3-204ENST00000439235 M0R036 132 aa15.18■□□□□ 0.02
CHD3-204ENST00000439235 PFN1P07737 140 aaKnown RBP15.18■□□□□ 0.02
CHD3-204ENST00000439235 OR5I1Q13606 314 aa15.18■□□□□ 0.02
CHD3-204ENST00000439235 Q6AWC8 147 aa15.18■□□□□ 0.02
CHD3-204ENST00000439235 KIR2DL5AQ8N109 375 aa15.18■□□□□ 0.02
CHD3-204ENST00000439235 KIR2DL5BQ8NHK3 375 aa15.18■□□□□ 0.02
CHD3-204ENST00000439235 ISOC2Q96AB3 205 aa15.18■□□□□ 0.02
CHD3-204ENST00000439235 DAZAP1Q96EP5 407 aaKnown RBP15.18■□□□□ 0.02
CHD3-204ENST00000439235 CSTL1Q9H114 145 aa15.18■□□□□ 0.02
CHD3-204ENST00000439235 FABP5P3A8MUU1 101 aa15.17■□□□□ 0.02
CHD3-204ENST00000439235 SH2D1AO60880 128 aa15.17■□□□□ 0.02
CHD3-204ENST00000439235 CA1P00915 261 aaPredicted RBP15.17■□□□□ 0.02
CHD3-204ENST00000439235 ZNF80P51504 273 aaPredicted RBP15.17■□□□□ 0.02
CHD3-204ENST00000439235 KIR3DS1Q14943 382 aa15.17■□□□□ 0.02
CHD3-204ENST00000439235 C20orf144Q9BQM9 153 aa15.17■□□□□ 0.02
CHD3-204ENST00000439235 CRXO43186 299 aaPredicted RBP15.16■□□□□ 0.02
CHD3-204ENST00000439235 FAM231DQ6ZW35 169 aa15.16■□□□□ 0.02
CHD3-204ENST00000439235 XCL2Q9UBD3 114 aa15.16■□□□□ 0.02
CHD3-204ENST00000439235 CMYA5Q8N3K9 4069 aa15.16■□□□□ 0.02
CHD3-204ENST00000439235 TRAV12-3A0A0B4J271 114 aa15.15■□□□□ 0.02
CHD3-204ENST00000439235 C19orf71A6NCJ1 209 aa15.15■□□□□ 0.02
CHD3-204ENST00000439235 B4DEV8 164 aa15.15■□□□□ 0.02
CHD3-204ENST00000439235 SNAPINO95295 136 aa15.15■□□□□ 0.02
CHD3-204ENST00000439235 S100A1P23297 94 aa15.15■□□□□ 0.02
CHD3-204ENST00000439235 CRIP1P50238 77 aa15.15■□□□□ 0.02
CHD3-204ENST00000439235 ERVFC1-1P60608 527 aa15.15■□□□□ 0.02
CHD3-204ENST00000439235 IBA57Q5T440 356 aaKnown RBP15.15■□□□□ 0.02
CHD3-204ENST00000439235 C15orf54Q8N8G6 183 aa15.15■□□□□ 0.02
CHD3-204ENST00000439235 SFRP2Q96HF1 295 aa15.15■□□□□ 0.02
CHD3-204ENST00000439235 P01737 135 aa15.14■□□□□ 0.01
CHD3-204ENST00000439235 LINC00322Q6ZN03 302 aaPredicted RBP15.14■□□□□ 0.01
CHD3-204ENST00000439235 CLRN3Q8NCR9 226 aa15.14■□□□□ 0.01
CHD3-204ENST00000439235 OSTCQ9NRP0 149 aa15.14■□□□□ 0.01
CHD3-204ENST00000439235 UBE2CO00762 179 aa15.13■□□□□ 0.01
CHD3-204ENST00000439235 PRB2P02812 416 aaPredicted RBP15.13■□□□□ 0.01
CHD3-204ENST00000439235 GIG44P09565 113 aaPredicted RBP15.13■□□□□ 0.01
CHD3-204ENST00000439235 RHEBQ15382 184 aa15.13■□□□□ 0.01
CHD3-204ENST00000439235 RNASE7Q9H1E1 156 aaKnown RBP15.13■□□□□ 0.01
CHD3-204ENST00000439235 GOLT1BQ9Y3E0 138 aa15.13■□□□□ 0.01
CHD3-204ENST00000439235 K7EIL1 84 aa15.12■□□□□ 0.01
CHD3-204ENST00000439235 PPP1R2P9O14990 202 aa15.12■□□□□ 0.01
CHD3-204ENST00000439235 GATCO43716 136 aaKnown RBP15.12■□□□□ 0.01
CHD3-204ENST00000439235 ZNF324O75467 553 aaPredicted RBP15.12■□□□□ 0.01
CHD3-204ENST00000439235 MT-ND4LP03901 98 aa15.12■□□□□ 0.01
CHD3-204ENST00000439235 TMEM256Q8N2U0 113 aa15.12■□□□□ 0.01
CHD3-204ENST00000439235 NUDT10Q8NFP7 164 aa15.12■□□□□ 0.01
CHD3-204ENST00000439235 OR10G8Q8NGN5 311 aa15.12■□□□□ 0.01
CHD3-204ENST00000439235 NUDT11Q96G61 164 aa15.12■□□□□ 0.01
CHD3-204ENST00000439235 AGRNO00468 2067 aa15.12■□□□□ 0.01
CHD3-204ENST00000439235 H7BYZ3 331 aa15.11■□□□□ 0.01
CHD3-204ENST00000439235 FRMD6-AS1P0C7T7 363 aa15.11■□□□□ 0.01
CHD3-204ENST00000439235 LINC01559Q495D7 138 aa15.11■□□□□ 0.01
CHD3-204ENST00000439235 ANAPC16Q96DE5 110 aa15.11■□□□□ 0.01
CHD3-204ENST00000439235 TMEM208Q9BTX3 173 aa15.11■□□□□ 0.01
CHD3-204ENST00000439235 RPP21Q9H633 154 aaKnown RBP15.11■□□□□ 0.01
CHD3-204ENST00000439235 NAGKQ9UJ70 344 aa15.11■□□□□ 0.01
CHD3-204ENST00000439235 TMEM189A5PLL7 270 aa15.1■□□□□ 0.01
CHD3-204ENST00000439235 ZNF705GA8MUZ8 300 aaPredicted RBP15.1■□□□□ 0.01
CHD3-204ENST00000439235 ORM1P02763 201 aa15.1■□□□□ 0.01
CHD3-204ENST00000439235 RBMY1A1P0DJD3 496 aaKnown RBP15.1■□□□□ 0.01
CHD3-204ENST00000439235 RBMY1CP0DJD4 496 aa15.1■□□□□ 0.01
CHD3-204ENST00000439235 RBMY1FQ15415 496 aaKnown RBP15.1■□□□□ 0.01
CHD3-204ENST00000439235 FAM159AQ6UWV7 190 aa15.1■□□□□ 0.01
CHD3-204ENST00000439235 PYGO2Q9BRQ0 406 aa15.1■□□□□ 0.01
CHD3-204ENST00000439235 RPS20P60866 119 aaKnown RBP15.09■□□□□ 0.01
CHD3-204ENST00000439235 RNF212Q495C1 297 aa15.09■□□□□ 0.01
CHD3-204ENST00000439235 CT83Q5H943 113 aa15.09■□□□□ 0.01
CHD3-204ENST00000439235 Q6ZQT7 251 aa15.09■□□□□ 0.01
CHD3-204ENST00000439235 OR2D3Q8NGH3 330 aa15.09■□□□□ 0.01
CHD3-204ENST00000439235 KCNS1Q96KK3 526 aa15.09■□□□□ 0.01
CHD3-204ENST00000439235 LINC01587Q99440 93 aa15.09■□□□□ 0.01
CHD3-204ENST00000439235 IGHV1OR15-1A0A075B7D0 117 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms