RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 C16orf54Q6UWD8 224 aa10.73□□□□□ -0.69
PTCHD3-201ENST00000438700 IGHV3OR16-13A0A075B7E8 117 aa10.72□□□□□ -0.69
PTCHD3-201ENST00000438700 IGHV3-74A0A0B4J1X5 117 aa10.72□□□□□ -0.69
PTCHD3-201ENST00000438700 C7orf71A4D174 169 aa10.72□□□□□ -0.69
PTCHD3-201ENST00000438700 CD5LO43866 347 aa10.72□□□□□ -0.69
PTCHD3-201ENST00000438700 SCGB2A1O75556 95 aa10.72□□□□□ -0.69
PTCHD3-201ENST00000438700 IGHV4-31P0DP07 118 aa10.72□□□□□ -0.69
PTCHD3-201ENST00000438700 ZNF502Q8TBZ5 544 aa10.72□□□□□ -0.69
PTCHD3-201ENST00000438700 Q96MF0 132 aa10.72□□□□□ -0.69
PTCHD3-201ENST00000438700 SMAD5-AS1Q9Y6J3 95 aa10.72□□□□□ -0.69
PTCHD3-201ENST00000438700 A0A1B0GUT8 65 aa10.72□□□□□ -0.69
PTCHD3-201ENST00000438700 CLEC19AQ6UXS0 136 aa10.72□□□□□ -0.69
PTCHD3-201ENST00000438700 NDFIP1Q9BT67 221 aa10.72□□□□□ -0.69
PTCHD3-201ENST00000438700 LINC00527Q9UJ94 153 aa10.72□□□□□ -0.69
PTCHD3-201ENST00000438700 J3QLI3 93 aa10.71□□□□□ -0.69
PTCHD3-201ENST00000438700 HAX1O00165 279 aa10.71□□□□□ -0.69
PTCHD3-201ENST00000438700 OR5AL1P0C617 328 aa10.71□□□□□ -0.69
PTCHD3-201ENST00000438700 HIST1H1AQ02539 215 aaPredicted RBP10.71□□□□□ -0.69
PTCHD3-201ENST00000438700 PET117Q6UWS5 81 aa10.71□□□□□ -0.69
PTCHD3-201ENST00000438700 KRTAP1-3Q8IUG1 177 aa10.71□□□□□ -0.69
PTCHD3-201ENST00000438700 CSTL1Q9H114 145 aa10.71□□□□□ -0.69
PTCHD3-201ENST00000438700 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.71□□□□□ -0.7
PTCHD3-201ENST00000438700 LINC01545Q5VT33 79 aa10.71□□□□□ -0.7
PTCHD3-201ENST00000438700 CCDC140Q96MF4 163 aa10.71□□□□□ -0.7
PTCHD3-201ENST00000438700 IGHV3-49A0A0A0MS15 119 aa10.7□□□□□ -0.7
PTCHD3-201ENST00000438700 A6NDX4 124 aa10.7□□□□□ -0.7
PTCHD3-201ENST00000438700 JMJD8Q96S16 334 aa10.7□□□□□ -0.7
PTCHD3-201ENST00000438700 VGLL1Q99990 258 aa10.7□□□□□ -0.7
PTCHD3-201ENST00000438700 LOC389332A0A1B0GUA5 103 aa10.69□□□□□ -0.7
PTCHD3-201ENST00000438700 COX8AP10176 69 aa10.69□□□□□ -0.7
PTCHD3-201ENST00000438700 FAM162BQ5T6X4 162 aa10.69□□□□□ -0.7
PTCHD3-201ENST00000438700 ZNF747Q9BV97 191 aa10.69□□□□□ -0.7
PTCHD3-201ENST00000438700 ZNF207O43670 478 aaKnown RBP10.69□□□□□ -0.7
PTCHD3-201ENST00000438700 SH2D1AO60880 128 aa10.69□□□□□ -0.7
PTCHD3-201ENST00000438700 IGHG4P01861 327 aa10.69□□□□□ -0.7
PTCHD3-201ENST00000438700 OR8A1Q8NGG7 326 aa10.69□□□□□ -0.7
PTCHD3-201ENST00000438700 ZFAND3Q9H8U3 227 aa10.69□□□□□ -0.7
PTCHD3-201ENST00000438700 SMIM15Q7Z3B0 74 aa10.68□□□□□ -0.7
PTCHD3-201ENST00000438700 RNF182Q8N6D2 247 aa10.68□□□□□ -0.7
PTCHD3-201ENST00000438700 AP5S1Q9NUS5 200 aa10.68□□□□□ -0.7
PTCHD3-201ENST00000438700 PEF1Q9UBV8 284 aaKnown RBP10.68□□□□□ -0.7
PTCHD3-201ENST00000438700 PRRC2AP48634 2157 aaKnown RBP10.68□□□□□ -0.7
PTCHD3-201ENST00000438700 A0A096LNJ9 63 aa10.68□□□□□ -0.7
PTCHD3-201ENST00000438700 GAGE10A6NGK3 116 aa10.68□□□□□ -0.7
PTCHD3-201ENST00000438700 IFI27P40305 119 aaPredicted RBP10.68□□□□□ -0.7
PTCHD3-201ENST00000438700 DEFB112Q30KQ8 113 aa10.68□□□□□ -0.7
PTCHD3-201ENST00000438700 TMEM97Q5BJF2 176 aa10.68□□□□□ -0.7
PTCHD3-201ENST00000438700 PRSS57Q6UWY2 283 aa10.68□□□□□ -0.7
PTCHD3-201ENST00000438700 TMEM190Q8WZ59 177 aa10.68□□□□□ -0.7
PTCHD3-201ENST00000438700 PRR25Q96S07 402 aa10.68□□□□□ -0.7
PTCHD3-201ENST00000438700 MS4A6AQ9H2W1 248 aa10.68□□□□□ -0.7
PTCHD3-201ENST00000438700 HSPB8Q9UJY1 196 aa10.68□□□□□ -0.7
PTCHD3-201ENST00000438700 CCDC168Q8NDH2 2452 aa10.68□□□□□ -0.7
PTCHD3-201ENST00000438700 TMEM189A5PLL7 270 aa10.67□□□□□ -0.7
PTCHD3-201ENST00000438700 RIGQ13278 110 aa10.67□□□□□ -0.7
PTCHD3-201ENST00000438700 RAB37Q96AX2 223 aa10.67□□□□□ -0.7
PTCHD3-201ENST00000438700 ITPR3Q14573 2671 aa10.67□□□□□ -0.7
PTCHD3-201ENST00000438700 TRAV41A0A0B4J266 112 aa10.67□□□□□ -0.7
PTCHD3-201ENST00000438700 H3BUT2 72 aa10.67□□□□□ -0.7
PTCHD3-201ENST00000438700 BUB3O43684 328 aa10.67□□□□□ -0.7
PTCHD3-201ENST00000438700 FGF6P10767 208 aa10.67□□□□□ -0.7
PTCHD3-201ENST00000438700 ZNF80P51504 273 aaPredicted RBP10.67□□□□□ -0.7
PTCHD3-201ENST00000438700 LYZL1Q6UWQ5 148 aa10.67□□□□□ -0.7
PTCHD3-201ENST00000438700 PRSS3P2Q8NHM4 247 aa10.67□□□□□ -0.7
PTCHD3-201ENST00000438700 SERTM2A0A1B0GWG4 89 aa10.66□□□□□ -0.7
PTCHD3-201ENST00000438700 TMEM213A2RRL7 107 aa10.66□□□□□ -0.7
PTCHD3-201ENST00000438700 CLPSL1A2RUU4 121 aa10.66□□□□□ -0.7
PTCHD3-201ENST00000438700 RPS20P60866 119 aaKnown RBP10.66□□□□□ -0.7
PTCHD3-201ENST00000438700 ERCC8Q13216 396 aa10.66□□□□□ -0.7
PTCHD3-201ENST00000438700 GCN1Q92616 2671 aaKnown RBP10.66□□□□□ -0.7
PTCHD3-201ENST00000438700 TEX15Q9BXT5 2789 aa10.66□□□□□ -0.7
PTCHD3-201ENST00000438700 K7ERU9 68 aa10.66□□□□□ -0.7
PTCHD3-201ENST00000438700 KLK9Q2XQG4 91 aa10.66□□□□□ -0.7
PTCHD3-201ENST00000438700 EEF1AKMT3Q96AZ1 226 aa10.66□□□□□ -0.7
PTCHD3-201ENST00000438700 KLK9Q9UKQ9 250 aa10.66□□□□□ -0.7
PTCHD3-201ENST00000438700 PRAC2D3DTV9 90 aa10.65□□□□□ -0.7
PTCHD3-201ENST00000438700 IGHV4-59P01825 116 aa10.65□□□□□ -0.7
PTCHD3-201ENST00000438700 BLCAPP62952 87 aa10.65□□□□□ -0.7
PTCHD3-201ENST00000438700 C19orf54Q5BKX5 351 aa10.65□□□□□ -0.7
PTCHD3-201ENST00000438700 WFDC3Q8IUB2 231 aa10.65□□□□□ -0.7
PTCHD3-201ENST00000438700 FER1L6-AS1Q8NA97 138 aa10.65□□□□□ -0.7
PTCHD3-201ENST00000438700 WFDC11Q8NEX6 87 aa10.65□□□□□ -0.7
PTCHD3-201ENST00000438700 FSHBP01225 129 aa10.65□□□□□ -0.7
PTCHD3-201ENST00000438700 CRIP2P52943 208 aaPredicted RBP10.65□□□□□ -0.7
PTCHD3-201ENST00000438700 TM4SF20Q53R12 229 aa10.64□□□□□ -0.71
PTCHD3-201ENST00000438700 Q6AWC8 147 aa10.64□□□□□ -0.71
PTCHD3-201ENST00000438700 UFSP1Q6NVU6 142 aa10.64□□□□□ -0.71
PTCHD3-201ENST00000438700 Q6ZS46 218 aa10.64□□□□□ -0.71
PTCHD3-201ENST00000438700 FA2HQ7L5A8 372 aa10.64□□□□□ -0.71
PTCHD3-201ENST00000438700 IGHG2P01859 326 aa10.64□□□□□ -0.71
PTCHD3-201ENST00000438700 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.64□□□□□ -0.71
PTCHD3-201ENST00000438700 IGF1P05019 195 aa10.63□□□□□ -0.71
PTCHD3-201ENST00000438700 CACNG7P62955 275 aa10.63□□□□□ -0.71
PTCHD3-201ENST00000438700 ATP5G2Q06055 141 aa10.63□□□□□ -0.71
PTCHD3-201ENST00000438700 PCP2Q8IVA1 136 aa10.63□□□□□ -0.71
PTCHD3-201ENST00000438700 AMN1Q8IY45 258 aa10.63□□□□□ -0.71
PTCHD3-201ENST00000438700 ZNF469Q96JG9 3925 aaPredicted RBP10.63□□□□□ -0.71
PTCHD3-201ENST00000438700 TLN2Q9Y4G6 2542 aa10.63□□□□□ -0.71
PTCHD3-201ENST00000438700 TRBV7-1A0A0A6YYK4 115 aa10.63□□□□□ -0.71
PTCHD3-201ENST00000438700 D6R8Y8 96 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms