RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 PGPA6NDG6 321 aa9.97□□□□□ -0.81
LINC01088-201ENST00000437737 CSN1S1P47710 185 aa9.97□□□□□ -0.81
LINC01088-201ENST00000437737 FAM3BP58499 235 aaPredicted RBP9.97□□□□□ -0.81
LINC01088-201ENST00000437737 ICAM4Q14773 271 aa9.97□□□□□ -0.81
LINC01088-201ENST00000437737 FAM222AQ5U5X8 452 aa9.97□□□□□ -0.81
LINC01088-201ENST00000437737 TMEM88Q6PEY1 159 aa9.97□□□□□ -0.81
LINC01088-201ENST00000437737 ZNF705AQ6ZN79 300 aaPredicted RBP9.97□□□□□ -0.81
LINC01088-201ENST00000437737 HIST1H2BAQ96A08 127 aa9.97□□□□□ -0.81
LINC01088-201ENST00000437737 SLC35B3Q9H1N7 401 aa9.97□□□□□ -0.81
LINC01088-201ENST00000437737 Q9H3A6 140 aa9.97□□□□□ -0.81
LINC01088-201ENST00000437737 ZNF331Q9NQX6 463 aaPredicted RBP9.97□□□□□ -0.81
LINC01088-201ENST00000437737 DKK2Q9UBU2 259 aa9.97□□□□□ -0.81
LINC01088-201ENST00000437737 YTHDF2Q9Y5A9 579 aaKnown RBP9.97□□□□□ -0.81
LINC01088-201ENST00000437737 SERTM2A0A1B0GWG4 89 aa9.96□□□□□ -0.82
LINC01088-201ENST00000437737 SMIM9A6NGZ8 99 aa9.96□□□□□ -0.82
LINC01088-201ENST00000437737 NDUFB4O95168 129 aa9.96□□□□□ -0.82
LINC01088-201ENST00000437737 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.96□□□□□ -0.82
LINC01088-201ENST00000437737 SPATA12Q7Z6I5 190 aa9.96□□□□□ -0.82
LINC01088-201ENST00000437737 SLC7A5P1Q8MH63 180 aa9.96□□□□□ -0.82
LINC01088-201ENST00000437737 C5orf17Q8NAS9 161 aa9.96□□□□□ -0.82
LINC01088-201ENST00000437737 MRPL53Q96EL3 112 aaKnown RBP9.96□□□□□ -0.82
LINC01088-201ENST00000437737 C16orf92Q96LL3 132 aa9.96□□□□□ -0.82
LINC01088-201ENST00000437737 NBDYA0A0U1RRE5 68 aa9.95□□□□□ -0.82
LINC01088-201ENST00000437737 ZNF705FA8MVS1 300 aaPredicted RBP9.95□□□□□ -0.82
LINC01088-201ENST00000437737 K7EQM0 130 aa9.95□□□□□ -0.82
LINC01088-201ENST00000437737 ISLRO14498 428 aa9.95□□□□□ -0.82
LINC01088-201ENST00000437737 SLC25A5P05141 298 aaKnown RBP9.95□□□□□ -0.82
LINC01088-201ENST00000437737 S100A9P06702 114 aaKnown RBP9.95□□□□□ -0.82
LINC01088-201ENST00000437737 ZNF705DP0CH99 300 aaPredicted RBP9.95□□□□□ -0.82
LINC01088-201ENST00000437737 ZNF705BP0CI00 300 aaPredicted RBP9.95□□□□□ -0.82
LINC01088-201ENST00000437737 SNRPD3P62318 126 aaKnown RBP9.95□□□□□ -0.82
LINC01088-201ENST00000437737 CCDC28AQ8IWP9 274 aa9.95□□□□□ -0.82
LINC01088-201ENST00000437737 C17orf77Q96MU5 243 aa9.95□□□□□ -0.82
LINC01088-201ENST00000437737 EPDR1Q9UM22 224 aa9.95□□□□□ -0.82
LINC01088-201ENST00000437737 EPM2AB3EWF7 344 aa9.94□□□□□ -0.82
LINC01088-201ENST00000437737 GGTLC3B5MD39 225 aa9.94□□□□□ -0.82
LINC01088-201ENST00000437737 KRBOX1C9JBD0 128 aa9.94□□□□□ -0.82
LINC01088-201ENST00000437737 H3BMM0 161 aa9.94□□□□□ -0.82
LINC01088-201ENST00000437737 H3BTX0 84 aa9.94□□□□□ -0.82
LINC01088-201ENST00000437737 SNRPCP09234 159 aaKnown RBP9.94□□□□□ -0.82
LINC01088-201ENST00000437737 ATP5G3P48201 142 aa9.94□□□□□ -0.82
LINC01088-201ENST00000437737 FXYD7P58549 80 aa9.94□□□□□ -0.82
LINC01088-201ENST00000437737 FAM74A3Q4VXF1 159 aa9.94□□□□□ -0.82
LINC01088-201ENST00000437737 C15orf53Q8NAA6 179 aa9.94□□□□□ -0.82
LINC01088-201ENST00000437737 DMBT1Q9UGM3 2413 aaPredicted RBP9.94□□□□□ -0.82
LINC01088-201ENST00000437737 TMEM218A2RU14 115 aa9.93□□□□□ -0.82
LINC01088-201ENST00000437737 FBLL1A6NHQ2 334 aaKnown RBP9.93□□□□□ -0.82
LINC01088-201ENST00000437737 SRP19P09132 144 aaKnown RBP9.93□□□□□ -0.82
LINC01088-201ENST00000437737 SRSF3P84103 164 aaKnown RBP9.93□□□□□ -0.82
LINC01088-201ENST00000437737 EXOC3-AS1Q8N2X6 119 aa9.93□□□□□ -0.82
LINC01088-201ENST00000437737 C11orf52Q96A22 123 aa9.93□□□□□ -0.82
LINC01088-201ENST00000437737 SLC17A3O00476 420 aa9.92□□□□□ -0.82
LINC01088-201ENST00000437737 IGKV3-20P01619 116 aa9.92□□□□□ -0.82
LINC01088-201ENST00000437737 SFTA3P0C7M3 94 aa9.92□□□□□ -0.82
LINC01088-201ENST00000437737 HLA-DRB4P13762 266 aa9.92□□□□□ -0.82
LINC01088-201ENST00000437737 CNN1P51911 297 aaKnown RBP9.92□□□□□ -0.82
LINC01088-201ENST00000437737 DAD1P61803 113 aa9.92□□□□□ -0.82
LINC01088-201ENST00000437737 PSG3Q16557 428 aa9.92□□□□□ -0.82
LINC01088-201ENST00000437737 HLA-DRB4X5D2U9 266 aa9.92□□□□□ -0.82
LINC01088-201ENST00000437737 PEX7O00628 323 aa9.91□□□□□ -0.82
LINC01088-201ENST00000437737 SOCS3O14543 225 aa9.91□□□□□ -0.82
LINC01088-201ENST00000437737 TCRAP04437 139 aa9.91□□□□□ -0.82
LINC01088-201ENST00000437737 INAFM2P0DMQ5 153 aa9.91□□□□□ -0.82
LINC01088-201ENST00000437737 CEBPGP53567 150 aa9.91□□□□□ -0.82
LINC01088-201ENST00000437737 CYB561D1Q8N8Q1 229 aa9.91□□□□□ -0.82
LINC01088-201ENST00000437737 ZNRF2Q8NHG8 242 aa9.91□□□□□ -0.82
LINC01088-201ENST00000437737 SEC11CQ9BY50 192 aa9.91□□□□□ -0.82
LINC01088-201ENST00000437737 TRAV8-2A0A0B4J237 113 aa9.9□□□□□ -0.82
LINC01088-201ENST00000437737 RBAKDNA6NC62 111 aa9.9□□□□□ -0.82
LINC01088-201ENST00000437737 DIRC3C9JPN6 131 aa9.9□□□□□ -0.82
LINC01088-201ENST00000437737 F8W036 122 aa9.9□□□□□ -0.82
LINC01088-201ENST00000437737 AKR1C3P42330 323 aa9.9□□□□□ -0.82
LINC01088-201ENST00000437737 TAS2R60P59551 318 aa9.9□□□□□ -0.82
LINC01088-201ENST00000437737 UBE2G1P62253 170 aa9.9□□□□□ -0.82
LINC01088-201ENST00000437737 ZNF738Q8NE65 137 aa9.9□□□□□ -0.82
LINC01088-201ENST00000437737 FMC1Q96HJ9 113 aa9.9□□□□□ -0.82
LINC01088-201ENST00000437737 GOLT1BQ9Y3E0 138 aa9.9□□□□□ -0.82
LINC01088-201ENST00000437737 SCO2A0A1W2PP80 73 aa9.89□□□□□ -0.83
LINC01088-201ENST00000437737 C9JQL5 133 aa9.89□□□□□ -0.83
LINC01088-201ENST00000437737 S100A1P23297 94 aa9.89□□□□□ -0.83
LINC01088-201ENST00000437737 GDF5OSQ5U4N7 250 aa9.89□□□□□ -0.83
LINC01088-201ENST00000437737 LINC00052Q96N35 136 aa9.89□□□□□ -0.83
LINC01088-201ENST00000437737 SMIM7Q9BQ49 75 aa9.89□□□□□ -0.83
LINC01088-201ENST00000437737 PARLQ9H300 379 aa9.89□□□□□ -0.83
LINC01088-201ENST00000437737 KLF12Q9Y4X4 402 aa9.89□□□□□ -0.83
LINC01088-201ENST00000437737 TRBV6-1A0A0K0K1D8 114 aa9.88□□□□□ -0.83
LINC01088-201ENST00000437737 ZNF727A8MUV8 499 aa9.88□□□□□ -0.83
LINC01088-201ENST00000437737 M0R3E3 92 aa9.88□□□□□ -0.83
LINC01088-201ENST00000437737 NUDT3O95989 172 aa9.88□□□□□ -0.83
LINC01088-201ENST00000437737 DEFB1P60022 68 aa9.88□□□□□ -0.83
LINC01088-201ENST00000437737 TMEM183BQ1AE95 376 aa9.88□□□□□ -0.83
LINC01088-201ENST00000437737 RRN3P1Q2M238 152 aa9.88□□□□□ -0.83
LINC01088-201ENST00000437737 GOLT1AQ6ZVE7 132 aa9.88□□□□□ -0.83
LINC01088-201ENST00000437737 RNF182Q8N6D2 247 aa9.88□□□□□ -0.83
LINC01088-201ENST00000437737 TMEM75Q8N9X5 138 aa9.88□□□□□ -0.83
LINC01088-201ENST00000437737 OR4B1Q8NGF8 309 aa9.88□□□□□ -0.83
LINC01088-201ENST00000437737 OR10J6PQ8NGY7 276 aa9.88□□□□□ -0.83
LINC01088-201ENST00000437737 SMIM12Q96EX1 92 aa9.88□□□□□ -0.83
LINC01088-201ENST00000437737 RPH3ALQ9UNE2 315 aa9.88□□□□□ -0.83
LINC01088-201ENST00000437737 C9JCJ5 164 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms