RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 NMBP08949 121 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 ZNF138P52744 262 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 SRSF3P84103 164 aaKnown RBP5.35□□□□□ -1.55
VPS50-203ENST00000436177 CD300CQ08708 224 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 RAB32Q13637 225 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 MRPL23Q16540 153 aaKnown RBP5.35□□□□□ -1.55
VPS50-203ENST00000436177 IBA57Q5T440 356 aaKnown RBP5.35□□□□□ -1.55
VPS50-203ENST00000436177 NFE4Q86UQ8 179 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 EXOC3-AS1Q8N2X6 119 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 TMEM252Q8N6L7 170 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 THAP6Q8TBB0 222 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 VSIG2Q96IQ7 327 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 ST6GAL2Q96JF0 529 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 C18orf15Q96N68 181 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 SDHCQ99643 169 aaPredicted RBP5.35□□□□□ -1.55
VPS50-203ENST00000436177 VGLL1Q99990 258 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 NPCDR1Q9BY65 106 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 SLC25A31Q9H0C2 315 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 AGPAT4-IT1Q9H0P7 198 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 MRPL16Q9NX20 251 aaKnown RBP5.35□□□□□ -1.55
VPS50-203ENST00000436177 PRO0255Q9UI72 69 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 KLF12Q9Y4X4 402 aa5.35□□□□□ -1.55
VPS50-203ENST00000436177 C17orf112F2Z3M2 114 aa5.34□□□□□ -1.55
VPS50-203ENST00000436177 NDUFB4O95168 129 aa5.34□□□□□ -1.55
VPS50-203ENST00000436177 OR10J4P0C629 311 aa5.34□□□□□ -1.55
VPS50-203ENST00000436177 NBEAP1P0C6P0 100 aa5.34□□□□□ -1.55
VPS50-203ENST00000436177 CRISP2P16562 243 aa5.34□□□□□ -1.55
VPS50-203ENST00000436177 SRIP30626 198 aa5.34□□□□□ -1.55
VPS50-203ENST00000436177 KRTAP10-2P60368 255 aa5.34□□□□□ -1.55
VPS50-203ENST00000436177 UBE2L3P68036 154 aaKnown RBP5.34□□□□□ -1.55
VPS50-203ENST00000436177 C9orf47Q6ZRZ4 202 aa5.34□□□□□ -1.55
VPS50-203ENST00000436177 C11orf72Q8NBR9 251 aa5.34□□□□□ -1.55
VPS50-203ENST00000436177 CHAC2Q8WUX2 184 aa5.34□□□□□ -1.55
VPS50-203ENST00000436177 C8orf49Q96NF6 230 aa5.34□□□□□ -1.55
VPS50-203ENST00000436177 PAXXQ9BUH6 204 aa5.34□□□□□ -1.55
VPS50-203ENST00000436177 CCDC32Q9BV29 185 aa5.34□□□□□ -1.55
VPS50-203ENST00000436177 MRPL32Q9BYC8 188 aaKnown RBP5.34□□□□□ -1.55
VPS50-203ENST00000436177 OR51M1Q9H341 326 aa5.34□□□□□ -1.55
VPS50-203ENST00000436177 HHLA3Q9XRX5 114 aa5.34□□□□□ -1.55
VPS50-203ENST00000436177 HSPG2P98160 4391 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 TRGV11A0A075B6L2 103 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 E5RGE8 158 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 PLA2G10O15496 165 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 SPINK4O60575 86 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 ZNF324O75467 553 aaPredicted RBP5.33□□□□□ -1.56
VPS50-203ENST00000436177 IFNA5P01569 189 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 EVI2AP22794 236 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 GCSAMLQ5JQS6 135 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 MIR17HGQ75NE6 70 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 NEGR1Q7Z3B1 354 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 ZFAND2AQ8N6M9 145 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 OR5C1Q8NGR4 320 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 Q8TAT8 98 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 ENKURQ8TC29 256 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 TXNDC17Q9BRA2 123 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 SLC25A2Q9BXI2 301 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 C11orf1Q9H5F2 150 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 NAGKQ9UJ70 344 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 LY96Q9Y6Y9 160 aa5.33□□□□□ -1.56
VPS50-203ENST00000436177 LRP1BQ9NZR2 4599 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 TRBV7-9A0A0J9YWB2 115 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 EPM2AB3EWF7 344 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 C9JCJ5 164 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 ORM1P02763 201 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 PET100P0DJ07 73 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 TAS2R45P59539 299 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 CYCSP99999 105 aaKnown RBP5.32□□□□□ -1.56
VPS50-203ENST00000436177 LRRC37A5PQ49AS3 106 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 KHDC3LQ587J8 217 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 FAM74A1Q5RGS3 127 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 MUC21Q5SSG8 566 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 FAM159AQ6UWV7 190 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 CMTM2Q8TAZ6 248 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 PHYHIPLQ96FC7 376 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 FAM19A4Q96LR4 140 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 SPXQ9BT56 116 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 NDUFA13Q9P0J0 144 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 ZNF492Q9P255 531 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 TP53TG3Q9ULZ0 132 aa5.32□□□□□ -1.56
VPS50-203ENST00000436177 RBAKDNA6NC62 111 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 K7EP13 123 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 PSCAO43653 123 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 PRAF2O60831 178 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 GYPEP15421 78 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 PPT1P50897 306 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 CRYBA4P53673 196 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 RANP62826 216 aaKnown RBP5.31□□□□□ -1.56
VPS50-203ENST00000436177 NHLH2Q02577 135 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 ZNF266Q14584 549 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 TMEM183BQ1AE95 376 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 PRR9Q5T870 116 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 KRTAP5-3Q6L8H2 238 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 SH2D6Q7Z4S9 175 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 TMEM183AQ8IXX5 376 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 LYPD1Q8N2G4 141 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 C10orf126Q8N4M7 172 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 NHLRC2Q8NBF2 726 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 SYT8Q8NBV8 401 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 SCGB1C1Q8TD33 95 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 S100ZQ8WXG8 99 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms