RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 PEF1Q9UBV8 284 aaKnown RBP12.74□□□□□ -0.37
LIMK1-203ENST00000435201 A0A1B0GV90 55 aa12.73□□□□□ -0.37
LIMK1-203ENST00000435201 IGLC3P0DOY3 106 aa12.73□□□□□ -0.37
LIMK1-203ENST00000435201 PET117Q6UWS5 81 aa12.73□□□□□ -0.37
LIMK1-203ENST00000435201 ATOH7Q8N100 152 aa12.73□□□□□ -0.37
LIMK1-203ENST00000435201 OR10AG1Q8NH19 301 aa12.73□□□□□ -0.37
LIMK1-203ENST00000435201 BEX4Q9NWD9 120 aaPredicted RBP12.73□□□□□ -0.37
LIMK1-203ENST00000435201 ZNF462Q96JM2 2506 aa12.73□□□□□ -0.37
LIMK1-203ENST00000435201 K7EMT4 169 aa12.72□□□□□ -0.37
LIMK1-203ENST00000435201 PSMB8P28062 276 aa12.72□□□□□ -0.37
LIMK1-203ENST00000435201 CKS2P33552 79 aa12.72□□□□□ -0.37
LIMK1-203ENST00000435201 LCNL1Q6ZST4 164 aa12.72□□□□□ -0.37
LIMK1-203ENST00000435201 LINC00173Q6ZV60 143 aa12.72□□□□□ -0.37
LIMK1-203ENST00000435201 SPATA12Q7Z6I5 190 aa12.72□□□□□ -0.37
LIMK1-203ENST00000435201 OR10J6PQ8NGY7 276 aa12.72□□□□□ -0.37
LIMK1-203ENST00000435201 SIGLEC8Q9NYZ4 499 aa12.72□□□□□ -0.37
LIMK1-203ENST00000435201 UBR5O95071 2799 aaPredicted RBP12.72□□□□□ -0.37
LIMK1-203ENST00000435201 ANKRD17O75179 2603 aaKnown RBP12.72□□□□□ -0.37
LIMK1-203ENST00000435201 PPBPP02775 128 aa12.72□□□□□ -0.37
LIMK1-203ENST00000435201 IFI27P40305 119 aaPredicted RBP12.72□□□□□ -0.37
LIMK1-203ENST00000435201 FAM106AQ4KMX7 169 aa12.72□□□□□ -0.37
LIMK1-203ENST00000435201 RHPN1-AS1Q9BWJ2 59 aa12.72□□□□□ -0.37
LIMK1-203ENST00000435201 C11orf21Q9P2W6 132 aa12.72□□□□□ -0.37
LIMK1-203ENST00000435201 UTP20O75691 2785 aaKnown RBP12.71□□□□□ -0.37
LIMK1-203ENST00000435201 OR4C46A6NHA9 309 aa12.71□□□□□ -0.37
LIMK1-203ENST00000435201 RNF223E7ERA6 249 aa12.71□□□□□ -0.37
LIMK1-203ENST00000435201 FSHBP01225 129 aa12.71□□□□□ -0.37
LIMK1-203ENST00000435201 TMEM95Q3KNT9 176 aa12.71□□□□□ -0.37
LIMK1-203ENST00000435201 LRRC75A-AS1Q8N1F1 130 aa12.71□□□□□ -0.37
LIMK1-203ENST00000435201 LAMTOR2Q9Y2Q5 125 aa12.71□□□□□ -0.37
LIMK1-203ENST00000435201 CELSR1Q9NYQ6 3014 aa12.71□□□□□ -0.38
LIMK1-203ENST00000435201 SAMD13Q5VXD3 122 aa12.7□□□□□ -0.38
LIMK1-203ENST00000435201 VPREB3Q9UKI3 123 aa12.7□□□□□ -0.38
LIMK1-203ENST00000435201 CELSR2Q9HCU4 2923 aa12.7□□□□□ -0.38
LIMK1-203ENST00000435201 LOC389332A0A1B0GUA5 103 aa12.7□□□□□ -0.38
LIMK1-203ENST00000435201 IGHV4-31P0DP07 118 aa12.7□□□□□ -0.38
LIMK1-203ENST00000435201 RPL11P62913 178 aaKnown RBP12.7□□□□□ -0.38
LIMK1-203ENST00000435201 FOXE3Q13461 319 aa12.7□□□□□ -0.38
LIMK1-203ENST00000435201 TM4SF20Q53R12 229 aa12.7□□□□□ -0.38
LIMK1-203ENST00000435201 MAPK1IP1LQ8NDC0 245 aa12.7□□□□□ -0.38
LIMK1-203ENST00000435201 RNF185Q96GF1 192 aa12.7□□□□□ -0.38
LIMK1-203ENST00000435201 MSRB1Q9NZV6 116 aa12.7□□□□□ -0.38
LIMK1-203ENST00000435201 ZMAT5Q9UDW3 170 aaKnown RBP12.7□□□□□ -0.38
LIMK1-203ENST00000435201 SMPXQ9UHP9 88 aa12.7□□□□□ -0.38
LIMK1-203ENST00000435201 ZFYVE26Q68DK2 2539 aa12.69□□□□□ -0.38
LIMK1-203ENST00000435201 DEFB113Q30KQ7 82 aa12.69□□□□□ -0.38
LIMK1-203ENST00000435201 MAJINQ3KP22 176 aa12.69□□□□□ -0.38
LIMK1-203ENST00000435201 TCF21O43680 179 aa12.68□□□□□ -0.38
LIMK1-203ENST00000435201 NPYP01303 97 aa12.68□□□□□ -0.38
LIMK1-203ENST00000435201 CACNG7P62955 275 aa12.68□□□□□ -0.38
LIMK1-203ENST00000435201 SMIM15Q7Z3B0 74 aa12.68□□□□□ -0.38
LIMK1-203ENST00000435201 ZNF747Q9BV97 191 aa12.68□□□□□ -0.38
LIMK1-203ENST00000435201 UFC1Q9Y3C8 167 aa12.68□□□□□ -0.38
LIMK1-203ENST00000435201 CRYBG3Q68DQ2 2970 aa12.68□□□□□ -0.38
LIMK1-203ENST00000435201 TRBV7-9A0A0J9YWB2 115 aa12.68□□□□□ -0.38
LIMK1-203ENST00000435201 SNAI2O43623 268 aa12.68□□□□□ -0.38
LIMK1-203ENST00000435201 IGLL1P15814 213 aa12.68□□□□□ -0.38
LIMK1-203ENST00000435201 HNRNPA3P51991 378 aaKnown RBP12.68□□□□□ -0.38
LIMK1-203ENST00000435201 Q6YL49 198 aa12.68□□□□□ -0.38
LIMK1-203ENST00000435201 Q6ZN92 141 aa12.68□□□□□ -0.38
LIMK1-203ENST00000435201 IGHV4-4A0A075B6R2 117 aa12.67□□□□□ -0.38
LIMK1-203ENST00000435201 TRAV21A0A0B4J279 112 aa12.67□□□□□ -0.38
LIMK1-203ENST00000435201 SMKR1H3BMG3 65 aa12.67□□□□□ -0.38
LIMK1-203ENST00000435201 NUTF2P61970 127 aaKnown RBP12.67□□□□□ -0.38
LIMK1-203ENST00000435201 PRR9Q5T870 116 aa12.67□□□□□ -0.38
LIMK1-203ENST00000435201 PRSS57Q6UWY2 283 aa12.67□□□□□ -0.38
LIMK1-203ENST00000435201 ZFAND2AQ8N6M9 145 aa12.67□□□□□ -0.38
LIMK1-203ENST00000435201 MAP1LC3AQ9H492 121 aa12.67□□□□□ -0.38
LIMK1-203ENST00000435201 ST20Q9HBF5 79 aa12.67□□□□□ -0.38
LIMK1-203ENST00000435201 TIMM8BQ9Y5J9 83 aaPredicted RBP12.67□□□□□ -0.38
LIMK1-203ENST00000435201 FAM208BQ5VWN6 2430 aa12.67□□□□□ -0.38
LIMK1-203ENST00000435201 NCR2O95944 276 aa12.66□□□□□ -0.38
LIMK1-203ENST00000435201 KRTAP10-9P60411 292 aa12.66□□□□□ -0.38
LIMK1-203ENST00000435201 Q5PR19 223 aa12.66□□□□□ -0.38
LIMK1-203ENST00000435201 LINC01545Q5VT33 79 aa12.66□□□□□ -0.38
LIMK1-203ENST00000435201 OR8A1Q8NGG7 326 aa12.66□□□□□ -0.38
LIMK1-203ENST00000435201 FAM19A4Q96LR4 140 aa12.66□□□□□ -0.38
LIMK1-203ENST00000435201 A0A096LNJ9 63 aa12.65□□□□□ -0.38
LIMK1-203ENST00000435201 HSBP1L1C9JCN9 74 aa12.65□□□□□ -0.38
LIMK1-203ENST00000435201 HBDP02042 147 aa12.65□□□□□ -0.38
LIMK1-203ENST00000435201 ID1P41134 155 aa12.65□□□□□ -0.38
LIMK1-203ENST00000435201 LRRK2Q5S007 2527 aa12.65□□□□□ -0.38
LIMK1-203ENST00000435201 CSPG4Q6UVK1 2322 aa12.65□□□□□ -0.38
LIMK1-203ENST00000435201 CR1P17927 2039 aa12.65□□□□□ -0.38
LIMK1-203ENST00000435201 APRG1Q8IVJ8 170 aa12.65□□□□□ -0.38
LIMK1-203ENST00000435201 LINC00469Q8N7U9 141 aa12.65□□□□□ -0.38
LIMK1-203ENST00000435201 FBN2P35556 2912 aa12.64□□□□□ -0.39
LIMK1-203ENST00000435201 MAP1AP78559 2803 aaPredicted RBP12.64□□□□□ -0.39
LIMK1-203ENST00000435201 LINC01546A6NGU7 62 aa12.64□□□□□ -0.39
LIMK1-203ENST00000435201 TNFRSF6BO95407 300 aa12.63□□□□□ -0.39
LIMK1-203ENST00000435201 ELANEP08246 267 aa12.63□□□□□ -0.39
LIMK1-203ENST00000435201 SPANXN1Q5VSR9 72 aa12.63□□□□□ -0.39
LIMK1-203ENST00000435201 NXT2Q9NPJ8 142 aaKnown RBP12.63□□□□□ -0.39
LIMK1-203ENST00000435201 MRPS16Q9Y3D3 137 aaKnown RBP12.63□□□□□ -0.39
LIMK1-203ENST00000435201 IGKV3-7A0A075B6H7 116 aa12.63□□□□□ -0.39
LIMK1-203ENST00000435201 H0Y8G0 127 aa12.63□□□□□ -0.39
LIMK1-203ENST00000435201 H3BVH4 76 aa12.63□□□□□ -0.39
LIMK1-203ENST00000435201 RPLP1P05386 114 aaKnown RBP12.63□□□□□ -0.39
LIMK1-203ENST00000435201 TSPOP30536 169 aa12.63□□□□□ -0.39
LIMK1-203ENST00000435201 C10orf99Q6UWK7 81 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms