RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 NHLRC2Q8NBF2 726 aa17■□□□□ 0.31
SMARCAL1-208ENST00000434435 XCL2Q9UBD3 114 aa17■□□□□ 0.31
SMARCAL1-208ENST00000434435 TRAV12-2A0A075B6T6 113 aa16.99■□□□□ 0.31
SMARCAL1-208ENST00000434435 TMEM218A2RU14 115 aa16.99■□□□□ 0.31
SMARCAL1-208ENST00000434435 INSP01308 110 aa16.99■□□□□ 0.31
SMARCAL1-208ENST00000434435 GFI1BQ5VTD9 330 aa16.99■□□□□ 0.31
SMARCAL1-208ENST00000434435 C7orf71A4D174 169 aa16.98■□□□□ 0.31
SMARCAL1-208ENST00000434435 PGPEP1LA6NFU8 196 aa16.98■□□□□ 0.31
SMARCAL1-208ENST00000434435 CRXO43186 299 aaPredicted RBP16.98■□□□□ 0.31
SMARCAL1-208ENST00000434435 BTN1A1Q13410 526 aa16.98■□□□□ 0.31
SMARCAL1-208ENST00000434435 KIR3DS1Q14943 382 aa16.98■□□□□ 0.31
SMARCAL1-208ENST00000434435 DEFB121Q5J5C9 76 aa16.98■□□□□ 0.31
SMARCAL1-208ENST00000434435 PRR9Q5T870 116 aa16.98■□□□□ 0.31
SMARCAL1-208ENST00000434435 COX8CQ7Z4L0 72 aa16.98■□□□□ 0.31
SMARCAL1-208ENST00000434435 SLC7A5P1Q8MH63 180 aa16.98■□□□□ 0.31
SMARCAL1-208ENST00000434435 ZC2HC1AQ96GY0 325 aa16.98■□□□□ 0.31
SMARCAL1-208ENST00000434435 MLST8Q9BVC4 326 aa16.98■□□□□ 0.31
SMARCAL1-208ENST00000434435 LY96Q9Y6Y9 160 aa16.98■□□□□ 0.31
SMARCAL1-208ENST00000434435 UBE2CO00762 179 aa16.97■□□□□ 0.31
SMARCAL1-208ENST00000434435 GCGP01275 180 aa16.97■□□□□ 0.31
SMARCAL1-208ENST00000434435 IGLV2-8P01709 118 aa16.97■□□□□ 0.31
SMARCAL1-208ENST00000434435 GIG44P09565 113 aaPredicted RBP16.97■□□□□ 0.31
SMARCAL1-208ENST00000434435 MGST1P10620 155 aaKnown RBP16.97■□□□□ 0.31
SMARCAL1-208ENST00000434435 RNASE4P34096 147 aaKnown RBP16.97■□□□□ 0.31
SMARCAL1-208ENST00000434435 MRAPQ8TCY5 172 aa16.97■□□□□ 0.31
SMARCAL1-208ENST00000434435 NAT8Q9UHE5 227 aa16.97■□□□□ 0.31
SMARCAL1-208ENST00000434435 F8W036 122 aa16.96■□□□□ 0.31
SMARCAL1-208ENST00000434435 TMEM241Q24JQ0 296 aa16.96■□□□□ 0.31
SMARCAL1-208ENST00000434435 NIPSNAP3BQ9BS92 247 aa16.96■□□□□ 0.31
SMARCAL1-208ENST00000434435 Q6AWC8 147 aa16.95■□□□□ 0.3
SMARCAL1-208ENST00000434435 C20orf144Q9BQM9 153 aa16.95■□□□□ 0.3
SMARCAL1-208ENST00000434435 BIN3Q9NQY0 253 aa16.95■□□□□ 0.3
SMARCAL1-208ENST00000434435 TRAV12-3A0A0B4J271 114 aa16.94■□□□□ 0.3
SMARCAL1-208ENST00000434435 TRAV21A0A0B4J279 112 aa16.94■□□□□ 0.3
SMARCAL1-208ENST00000434435 OCC1Q8TAD7 63 aa16.94■□□□□ 0.3
SMARCAL1-208ENST00000434435 PFN1P07737 140 aaKnown RBP16.93■□□□□ 0.3
SMARCAL1-208ENST00000434435 ADCYAP1P18509 176 aa16.93■□□□□ 0.3
SMARCAL1-208ENST00000434435 ZNF80P51504 273 aaPredicted RBP16.93■□□□□ 0.3
SMARCAL1-208ENST00000434435 DEFA6Q01524 100 aa16.93■□□□□ 0.3
SMARCAL1-208ENST00000434435 PRR27Q6MZM9 219 aa16.93■□□□□ 0.3
SMARCAL1-208ENST00000434435 SEC11CQ9BY50 192 aa16.93■□□□□ 0.3
SMARCAL1-208ENST00000434435 GOLT1BQ9Y3E0 138 aa16.93■□□□□ 0.3
SMARCAL1-208ENST00000434435 FAM162BQ5T6X4 162 aa16.92■□□□□ 0.3
SMARCAL1-208ENST00000434435 LINC01551Q86U37 167 aa16.92■□□□□ 0.3
SMARCAL1-208ENST00000434435 FABP5P3A8MUU1 101 aa16.91■□□□□ 0.3
SMARCAL1-208ENST00000434435 K7EN84 100 aa16.91■□□□□ 0.3
SMARCAL1-208ENST00000434435 RBMY1A1P0DJD3 496 aaKnown RBP16.91■□□□□ 0.3
SMARCAL1-208ENST00000434435 RBMY1CP0DJD4 496 aa16.91■□□□□ 0.3
SMARCAL1-208ENST00000434435 RPL23P62829 140 aaKnown RBP16.91■□□□□ 0.3
SMARCAL1-208ENST00000434435 RBMY1FQ15415 496 aaKnown RBP16.91■□□□□ 0.3
SMARCAL1-208ENST00000434435 ADIRFQ15847 76 aa16.91■□□□□ 0.3
SMARCAL1-208ENST00000434435 DEFB135Q30KP9 77 aa16.91■□□□□ 0.3
SMARCAL1-208ENST00000434435 Q6ZWC4 215 aa16.91■□□□□ 0.3
SMARCAL1-208ENST00000434435 TMEM256Q8N2U0 113 aa16.91■□□□□ 0.3
SMARCAL1-208ENST00000434435 CSNK1G2-AS1Q8NCQ2 148 aa16.91■□□□□ 0.3
SMARCAL1-208ENST00000434435 TMEM208Q9BTX3 173 aa16.91■□□□□ 0.3
SMARCAL1-208ENST00000434435 SDF2L1Q9HCN8 221 aa16.91■□□□□ 0.3
SMARCAL1-208ENST00000434435 SH2D1AO60880 128 aa16.9■□□□□ 0.3
SMARCAL1-208ENST00000434435 ZNF324O75467 553 aaPredicted RBP16.9■□□□□ 0.3
SMARCAL1-208ENST00000434435 CRIP1P50238 77 aa16.9■□□□□ 0.3
SMARCAL1-208ENST00000434435 OR5I1Q13606 314 aa16.9■□□□□ 0.3
SMARCAL1-208ENST00000434435 PNRC1Q12796 327 aaPredicted RBP16.89■□□□□ 0.29
SMARCAL1-208ENST00000434435 C1orf158Q8N1D5 194 aa16.89■□□□□ 0.29
SMARCAL1-208ENST00000434435 DAZAP1Q96EP5 407 aaKnown RBP16.89■□□□□ 0.29
SMARCAL1-208ENST00000434435 RCHY1Q96PM5 261 aa16.89■□□□□ 0.29
SMARCAL1-208ENST00000434435 IGHV3OR16-12A0A075B7B8 117 aa16.88■□□□□ 0.29
SMARCAL1-208ENST00000434435 KRBOX1C9JBD0 128 aa16.88■□□□□ 0.29
SMARCAL1-208ENST00000434435 H7BYZ3 331 aa16.88■□□□□ 0.29
SMARCAL1-208ENST00000434435 C10orf91Q5T1B1 145 aa16.88■□□□□ 0.29
SMARCAL1-208ENST00000434435 Q6ZQT7 251 aa16.88■□□□□ 0.29
SMARCAL1-208ENST00000434435 LINC01587Q99440 93 aa16.88■□□□□ 0.29
SMARCAL1-208ENST00000434435 PYGO2Q9BRQ0 406 aa16.87■□□□□ 0.29
SMARCAL1-208ENST00000434435 NAGKQ9UJ70 344 aa16.87■□□□□ 0.29
SMARCAL1-208ENST00000434435 CARHSP1Q9Y2V2 147 aaKnown RBP16.87■□□□□ 0.29
SMARCAL1-208ENST00000434435 C19orf71A6NCJ1 209 aa16.86■□□□□ 0.29
SMARCAL1-208ENST00000434435 MUC21Q5SSG8 566 aa16.86■□□□□ 0.29
SMARCAL1-208ENST00000434435 ZNF705AQ6ZN79 300 aaPredicted RBP16.86■□□□□ 0.29
SMARCAL1-208ENST00000434435 SBSPONQ8IVN8 264 aa16.86■□□□□ 0.29
SMARCAL1-208ENST00000434435 ISOC2Q96AB3 205 aa16.86■□□□□ 0.29
SMARCAL1-208ENST00000434435 RNF183Q96D59 192 aa16.86■□□□□ 0.29
SMARCAL1-208ENST00000434435 TP53TG1Q9Y2A0 90 aa16.86■□□□□ 0.29
SMARCAL1-208ENST00000434435 IGHV1OR15-1A0A075B7D0 117 aa16.85■□□□□ 0.29
SMARCAL1-208ENST00000434435 FAM159AQ6UWV7 190 aa16.85■□□□□ 0.29
SMARCAL1-208ENST00000434435 SPRY2O43597 315 aa16.84■□□□□ 0.29
SMARCAL1-208ENST00000434435 P01737 135 aa16.84■□□□□ 0.29
SMARCAL1-208ENST00000434435 ORM1P02763 201 aa16.84■□□□□ 0.29
SMARCAL1-208ENST00000434435 IBA57Q5T440 356 aaKnown RBP16.84■□□□□ 0.29
SMARCAL1-208ENST00000434435 FAM231DQ6ZW35 169 aa16.84■□□□□ 0.29
SMARCAL1-208ENST00000434435 LINC00467Q9BRT7 94 aa16.84■□□□□ 0.29
SMARCAL1-208ENST00000434435 RNASE7Q9H1E1 156 aaKnown RBP16.84■□□□□ 0.29
SMARCAL1-208ENST00000434435 C11orf21Q9P2W6 132 aa16.84■□□□□ 0.29
SMARCAL1-208ENST00000434435 M0R036 132 aa16.83■□□□□ 0.28
SMARCAL1-208ENST00000434435 ERVFC1-1P60608 527 aa16.83■□□□□ 0.28
SMARCAL1-208ENST00000434435 ANXA2RQ3ZCQ2 193 aa16.83■□□□□ 0.28
SMARCAL1-208ENST00000434435 LINC01559Q495D7 138 aa16.83■□□□□ 0.28
SMARCAL1-208ENST00000434435 NUDT10Q8NFP7 164 aa16.83■□□□□ 0.28
SMARCAL1-208ENST00000434435 NUDT11Q96G61 164 aa16.83■□□□□ 0.28
SMARCAL1-208ENST00000434435 KCNS1Q96KK3 526 aa16.83■□□□□ 0.28
SMARCAL1-208ENST00000434435 B9D2Q9BPU9 175 aa16.83■□□□□ 0.28
SMARCAL1-208ENST00000434435 B4DEV8 164 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms