RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 KLF17Q5JT82 389 aaPredicted RBP11.47□□□□□ -0.57
DDX56-205ENST00000433257 BCL6BQ8N143 479 aaPredicted RBP11.47□□□□□ -0.57
DDX56-205ENST00000433257 CHAC1Q9BUX1 264 aa11.47□□□□□ -0.57
DDX56-205ENST00000433257 F8W1H4 67 aa11.46□□□□□ -0.57
DDX56-205ENST00000433257 BAHCC1Q9P281 2608 aa11.46□□□□□ -0.58
DDX56-205ENST00000433257 GOSR1O95249 250 aa11.46□□□□□ -0.58
DDX56-205ENST00000433257 GCSHP23434 173 aa11.46□□□□□ -0.58
DDX56-205ENST00000433257 HES1Q14469 280 aa11.46□□□□□ -0.58
DDX56-205ENST00000433257 ZNF672Q499Z4 452 aaPredicted RBP11.46□□□□□ -0.58
DDX56-205ENST00000433257 IL17RELQ6ZVW7 336 aa11.46□□□□□ -0.58
DDX56-205ENST00000433257 PCP2Q8IVA1 136 aa11.46□□□□□ -0.58
DDX56-205ENST00000433257 ATP6V0BQ99437 205 aa11.46□□□□□ -0.58
DDX56-205ENST00000433257 DKK2Q9UBU2 259 aa11.46□□□□□ -0.58
DDX56-205ENST00000433257 HHLA3Q9XRX5 114 aa11.46□□□□□ -0.58
DDX56-205ENST00000433257 HILPDAQ9Y5L2 63 aa11.46□□□□□ -0.58
DDX56-205ENST00000433257 IGHV4-4A0A075B6R2 117 aa11.45□□□□□ -0.58
DDX56-205ENST00000433257 F8W735 103 aaPredicted RBP11.45□□□□□ -0.58
DDX56-205ENST00000433257 HIST2H2BCQ6DN03 193 aa11.45□□□□□ -0.58
DDX56-205ENST00000433257 PRSS57Q6UWY2 283 aa11.45□□□□□ -0.58
DDX56-205ENST00000433257 Q71RC1 249 aaPredicted RBP11.45□□□□□ -0.58
DDX56-205ENST00000433257 CEND1Q8N111 149 aa11.45□□□□□ -0.58
DDX56-205ENST00000433257 MRAP2Q96G30 205 aa11.45□□□□□ -0.58
DDX56-205ENST00000433257 TRAV12-1A0A0B4J245 112 aa11.44□□□□□ -0.58
DDX56-205ENST00000433257 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.44□□□□□ -0.58
DDX56-205ENST00000433257 LINC01549A6NIU2 74 aa11.44□□□□□ -0.58
DDX56-205ENST00000433257 SLC25A16P16260 332 aa11.44□□□□□ -0.58
DDX56-205ENST00000433257 LAGE3Q14657 143 aa11.44□□□□□ -0.58
DDX56-205ENST00000433257 Q8N6K4 173 aa11.44□□□□□ -0.58
DDX56-205ENST00000433257 RAB37Q96AX2 223 aa11.44□□□□□ -0.58
DDX56-205ENST00000433257 VGLL1Q99990 258 aa11.44□□□□□ -0.58
DDX56-205ENST00000433257 LENEPQ9Y5L5 61 aa11.44□□□□□ -0.58
DDX56-205ENST00000433257 NCBP2LA6PVI3 153 aaKnown RBP11.43□□□□□ -0.58
DDX56-205ENST00000433257 TMEM238C9JI98 176 aa11.43□□□□□ -0.58
DDX56-205ENST00000433257 CTSGP08311 255 aa11.43□□□□□ -0.58
DDX56-205ENST00000433257 ZNF80P51504 273 aaPredicted RBP11.43□□□□□ -0.58
DDX56-205ENST00000433257 FAM110DQ8TAY7 271 aaPredicted RBP11.43□□□□□ -0.58
DDX56-205ENST00000433257 FOXC2Q99958 501 aa11.43□□□□□ -0.58
DDX56-205ENST00000433257 TRBV25-1A0A075B6N4 114 aa11.43□□□□□ -0.58
DDX56-205ENST00000433257 NBPF19A0A087WUL8 3843 aa11.43□□□□□ -0.58
DDX56-205ENST00000433257 SMKR1H3BMG3 65 aa11.43□□□□□ -0.58
DDX56-205ENST00000433257 SAP30O75446 220 aa11.43□□□□□ -0.58
DDX56-205ENST00000433257 TMEM158Q8WZ71 300 aa11.43□□□□□ -0.58
DDX56-205ENST00000433257 A0A087WX48 190 aa11.42□□□□□ -0.58
DDX56-205ENST00000433257 TMEM78Q5T7P6 136 aa11.42□□□□□ -0.58
DDX56-205ENST00000433257 ZC2HC1BQ5TFG8 222 aa11.42□□□□□ -0.58
DDX56-205ENST00000433257 DTX2Q86UW9 622 aa11.42□□□□□ -0.58
DDX56-205ENST00000433257 SMAD5-AS1Q9Y6J3 95 aa11.42□□□□□ -0.58
DDX56-205ENST00000433257 PLXNB1O43157 2135 aa11.41□□□□□ -0.58
DDX56-205ENST00000433257 IGLV2-18A0A075B6J9 118 aa11.41□□□□□ -0.58
DDX56-205ENST00000433257 E9PLD3 99 aa11.41□□□□□ -0.58
DDX56-205ENST00000433257 PPP1R17O96001 155 aa11.41□□□□□ -0.58
DDX56-205ENST00000433257 FOXE3Q13461 319 aa11.41□□□□□ -0.58
DDX56-205ENST00000433257 ORMDL2Q53FV1 153 aa11.41□□□□□ -0.58
DDX56-205ENST00000433257 C18orf15Q96N68 181 aa11.41□□□□□ -0.58
DDX56-205ENST00000433257 PTPN13Q12923 2485 aa11.41□□□□□ -0.58
DDX56-205ENST00000433257 PKDREJQ9NTG1 2253 aa11.4□□□□□ -0.58
DDX56-205ENST00000433257 CIDEAO60543 219 aa11.4□□□□□ -0.58
DDX56-205ENST00000433257 IGHG4P01861 327 aa11.4□□□□□ -0.58
DDX56-205ENST00000433257 TMEM11P17152 192 aa11.4□□□□□ -0.58
DDX56-205ENST00000433257 Q8TAT8 98 aa11.4□□□□□ -0.58
DDX56-205ENST00000433257 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.4□□□□□ -0.59
DDX56-205ENST00000433257 H7C1H1 209 aa11.4□□□□□ -0.59
DDX56-205ENST00000433257 BUB3O43684 328 aa11.4□□□□□ -0.59
DDX56-205ENST00000433257 FXYD2P54710 66 aa11.4□□□□□ -0.59
DDX56-205ENST00000433257 CRYBG3Q68DQ2 2970 aa11.4□□□□□ -0.59
DDX56-205ENST00000433257 ZNF502Q8TBZ5 544 aa11.4□□□□□ -0.59
DDX56-205ENST00000433257 PHLDA1Q8WV24 401 aaPredicted RBP11.4□□□□□ -0.59
DDX56-205ENST00000433257 CHTOPQ9Y3Y2 248 aaKnown RBP11.4□□□□□ -0.59
DDX56-205ENST00000433257 ANKHD1Q8IWZ3 2542 aaKnown RBP11.39□□□□□ -0.59
DDX56-205ENST00000433257 HECTD1Q9ULT8 2610 aa11.39□□□□□ -0.59
DDX56-205ENST00000433257 FOXI2Q6ZQN5 318 aa11.39□□□□□ -0.59
DDX56-205ENST00000433257 C9orf47Q6ZRZ4 202 aa11.39□□□□□ -0.59
DDX56-205ENST00000433257 VMO1Q7Z5L0 202 aa11.39□□□□□ -0.59
DDX56-205ENST00000433257 DYNAPQ8N1N2 210 aa11.39□□□□□ -0.59
DDX56-205ENST00000433257 C20orf78Q9BR46 151 aa11.39□□□□□ -0.59
DDX56-205ENST00000433257 ARFGEF3Q5TH69 2177 aa11.38□□□□□ -0.59
DDX56-205ENST00000433257 TRBV7-1A0A0A6YYK4 115 aa11.38□□□□□ -0.59
DDX56-205ENST00000433257 TMEM238LA0A1B0GVL6 79 aa11.38□□□□□ -0.59
DDX56-205ENST00000433257 A6NJY4 79 aa11.38□□□□□ -0.59
DDX56-205ENST00000433257 F8VRH5 84 aa11.38□□□□□ -0.59
DDX56-205ENST00000433257 MED14OSP0DP75 135 aa11.38□□□□□ -0.59
DDX56-205ENST00000433257 DLX1P56177 255 aa11.38□□□□□ -0.59
DDX56-205ENST00000433257 RIPPLY3P57055 190 aa11.38□□□□□ -0.59
DDX56-205ENST00000433257 FXYD7P58549 80 aa11.38□□□□□ -0.59
DDX56-205ENST00000433257 SAMD13Q5VXD3 122 aa11.38□□□□□ -0.59
DDX56-205ENST00000433257 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.38□□□□□ -0.59
DDX56-205ENST00000433257 EEF1AKMT3Q96AZ1 226 aa11.38□□□□□ -0.59
DDX56-205ENST00000433257 ZNF479Q96JC4 524 aa11.38□□□□□ -0.59
DDX56-205ENST00000433257 METTL26Q96S19 204 aa11.38□□□□□ -0.59
DDX56-205ENST00000433257 ZFAND3Q9H8U3 227 aa11.38□□□□□ -0.59
DDX56-205ENST00000433257 IGLL5B9A064 214 aa11.37□□□□□ -0.59
DDX56-205ENST00000433257 RPL24P83731 157 aaKnown RBP11.37□□□□□ -0.59
DDX56-205ENST00000433257 LYRM7Q5U5X0 104 aa11.37□□□□□ -0.59
DDX56-205ENST00000433257 GTSCR1Q86UQ5 136 aa11.37□□□□□ -0.59
DDX56-205ENST00000433257 NHP2Q9NX24 153 aaKnown RBP11.37□□□□□ -0.59
DDX56-205ENST00000433257 MSRB1Q9NZV6 116 aa11.37□□□□□ -0.59
DDX56-205ENST00000433257 IGKV2D-26A0A0A0MRZ7 120 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 IGHV7-81A0A0B4J1V7 117 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 A0A1W2PRD5 423 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 A0A1W2PRF3 423 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms