RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 PRR20DP86480 221 aa10.13□□□□□ -0.79
LDB3-205ENST00000429277 PRR20BP86481 221 aa10.13□□□□□ -0.79
LDB3-205ENST00000429277 PRR20AP86496 221 aa10.13□□□□□ -0.79
LDB3-205ENST00000429277 DSCR8Q96T75 97 aa10.13□□□□□ -0.79
LDB3-205ENST00000429277 SIGLEC8Q9NYZ4 499 aa10.13□□□□□ -0.79
LDB3-205ENST00000429277 MED12Q93074 2177 aa10.13□□□□□ -0.79
LDB3-205ENST00000429277 SH2D6Q7Z4S9 175 aa10.13□□□□□ -0.79
LDB3-205ENST00000429277 ZNF491Q8N8L2 437 aa10.13□□□□□ -0.79
LDB3-205ENST00000429277 NCOR1O75376 2440 aa10.13□□□□□ -0.79
LDB3-205ENST00000429277 TCF15Q12870 199 aa10.13□□□□□ -0.79
LDB3-205ENST00000429277 ZNF726P1Q15940 193 aa10.13□□□□□ -0.79
LDB3-205ENST00000429277 SCRT2Q9NQ03 307 aa10.13□□□□□ -0.79
LDB3-205ENST00000429277 LTAP01374 205 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 IGHV2-70P01814 119 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 IGF2-ASQ6U949 168 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 CACNA1BQ00975 2339 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 PRSS29PA6NIE9 313 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 LINC01545Q5VT33 79 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 ZC2HC1AQ96GY0 325 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 COL6A6A6NMZ7 2263 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 FANCMQ8IYD8 2048 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 CACNA1GO43497 2377 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 J3QQQ9 107 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 IGLC2P0DOY2 106 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 IGLC3P0DOY3 106 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 GTSF1LQ9H1H1 148 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 CRLF1O75462 422 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 SUMO4Q6EEV6 95 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 KIAA2026Q5HYC2 2103 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 ANGP03950 147 aaKnown RBP10.12□□□□□ -0.79
LDB3-205ENST00000429277 HLA-DMBP28068 263 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 HERV-K104P63124 156 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 FOXE3Q13461 319 aa10.12□□□□□ -0.79
LDB3-205ENST00000429277 FNDC1Q4ZHG4 1894 aaPredicted RBP10.11□□□□□ -0.79
LDB3-205ENST00000429277 TRAV12-2A0A075B6T6 113 aa10.11□□□□□ -0.79
LDB3-205ENST00000429277 FGF6P10767 208 aa10.11□□□□□ -0.79
LDB3-205ENST00000429277 C10orf91Q5T1B1 145 aa10.11□□□□□ -0.79
LDB3-205ENST00000429277 SPANXCQ9NY87 97 aa10.11□□□□□ -0.79
LDB3-205ENST00000429277 DIDO1Q9BTC0 2240 aaKnown RBP10.11□□□□□ -0.79
LDB3-205ENST00000429277 WIPF2Q8TF74 440 aaPredicted RBP10.11□□□□□ -0.79
LDB3-205ENST00000429277 C9JQL5 133 aa10.11□□□□□ -0.79
LDB3-205ENST00000429277 DUX4L9Q6RFH8 374 aaPredicted RBP10.11□□□□□ -0.79
LDB3-205ENST00000429277 SLX1AQ9BQ83 275 aa10.11□□□□□ -0.79
LDB3-205ENST00000429277 TPSG1Q9NRR2 321 aa10.11□□□□□ -0.79
LDB3-205ENST00000429277 MRPL35Q9NZE8 188 aaKnown RBP10.11□□□□□ -0.79
LDB3-205ENST00000429277 ROS1P08922 2347 aa10.11□□□□□ -0.79
LDB3-205ENST00000429277 TP53BP1Q12888 1972 aaPredicted RBP10.11□□□□□ -0.79
LDB3-205ENST00000429277 NPYP01303 97 aa10.11□□□□□ -0.79
LDB3-205ENST00000429277 CGB3P0DN86 165 aa10.11□□□□□ -0.79
LDB3-205ENST00000429277 VWA8A3KMH1 1905 aa10.1□□□□□ -0.79
LDB3-205ENST00000429277 HOXB4P17483 251 aaPredicted RBP10.1□□□□□ -0.79
LDB3-205ENST00000429277 CITED1Q99966 193 aa10.1□□□□□ -0.79
LDB3-205ENST00000429277 C9orf153Q5TBE3 101 aa10.1□□□□□ -0.79
LDB3-205ENST00000429277 MAPK1IP1LQ8NDC0 245 aa10.1□□□□□ -0.79
LDB3-205ENST00000429277 IGF2BP2-AS1Q96M15 143 aa10.1□□□□□ -0.79
LDB3-205ENST00000429277 ZNF503-AS2A6NEH8 195 aa10.1□□□□□ -0.79
LDB3-205ENST00000429277 RSPO1Q2MKA7 263 aaPredicted RBP10.1□□□□□ -0.79
LDB3-205ENST00000429277 C9orf66Q5T8R8 295 aa10.1□□□□□ -0.79
LDB3-205ENST00000429277 TCF20Q9UGU0 1960 aaKnown RBP10.09□□□□□ -0.79
LDB3-205ENST00000429277 NXPH4O95158 308 aa10.09□□□□□ -0.79
LDB3-205ENST00000429277 CEND1Q8N111 149 aa10.09□□□□□ -0.79
LDB3-205ENST00000429277 IGLC7A0M8Q6 106 aa10.09□□□□□ -0.79
LDB3-205ENST00000429277 IGFL2Q6UWQ7 119 aa10.09□□□□□ -0.79
LDB3-205ENST00000429277 WNK2Q9Y3S1 2297 aa10.09□□□□□ -0.79
LDB3-205ENST00000429277 IGHV3-38A0A0C4DH36 116 aa10.09□□□□□ -0.79
LDB3-205ENST00000429277 SHISA9B4DS77 424 aa10.09□□□□□ -0.79
LDB3-205ENST00000429277 BVES-AS1Q5T3Y7 98 aa10.09□□□□□ -0.79
LDB3-205ENST00000429277 ARFGEF3Q5TH69 2177 aa10.08□□□□□ -0.8
LDB3-205ENST00000429277 TRAV26-2A0A0B4J265 109 aa10.08□□□□□ -0.8
LDB3-205ENST00000429277 K7EP34 96 aa10.08□□□□□ -0.8
LDB3-205ENST00000429277 FER1L5A0AVI2 2057 aa10.08□□□□□ -0.8
LDB3-205ENST00000429277 PHF3Q92576 2039 aaKnown RBP10.08□□□□□ -0.8
LDB3-205ENST00000429277 TRAV25A0A0B4J276 109 aa10.08□□□□□ -0.8
LDB3-205ENST00000429277 KLF2Q9Y5W3 355 aaPredicted RBP10.08□□□□□ -0.8
LDB3-205ENST00000429277 C22orf46C9J442 243 aa10.08□□□□□ -0.8
LDB3-205ENST00000429277 HAMPP81172 84 aa10.08□□□□□ -0.8
LDB3-205ENST00000429277 NPBQ8NG41 125 aa10.08□□□□□ -0.8
LDB3-205ENST00000429277 CENPVL3A0A0U1RRI6 287 aa10.08□□□□□ -0.8
LDB3-205ENST00000429277 CCL24O00175 119 aa10.08□□□□□ -0.8
LDB3-205ENST00000429277 CGB7P0DN87 165 aa10.08□□□□□ -0.8
LDB3-205ENST00000429277 SLC25A29Q8N8R3 303 aa10.08□□□□□ -0.8
LDB3-205ENST00000429277 H3BQ85 93 aa10.07□□□□□ -0.8
LDB3-205ENST00000429277 CADP27708 2225 aa10.07□□□□□ -0.8
LDB3-205ENST00000429277 PRSS47A8MTI9 375 aa10.07□□□□□ -0.8
LDB3-205ENST00000429277 DEFB112Q30KQ8 113 aa10.07□□□□□ -0.8
LDB3-205ENST00000429277 IGFBPL1Q8WX77 278 aa10.07□□□□□ -0.8
LDB3-205ENST00000429277 PLXNA4Q9HCM2 1894 aa10.07□□□□□ -0.8
LDB3-205ENST00000429277 PKDREJQ9NTG1 2253 aa10.07□□□□□ -0.8
LDB3-205ENST00000429277 Q6ZWC4 215 aa10.07□□□□□ -0.8
LDB3-205ENST00000429277 C16orf74Q96GX8 76 aa10.07□□□□□ -0.8
LDB3-205ENST00000429277 SPTAN1Q13813 2472 aaKnown RBP10.07□□□□□ -0.8
LDB3-205ENST00000429277 IFITM1P13164 125 aa10.06□□□□□ -0.8
LDB3-205ENST00000429277 FAM120AOSQ5T036 256 aa10.06□□□□□ -0.8
LDB3-205ENST00000429277 CFHR4Q92496 578 aa10.06□□□□□ -0.8
LDB3-205ENST00000429277 MORN5Q5VZ52 161 aa10.06□□□□□ -0.8
LDB3-205ENST00000429277 AGPAT4-IT1Q9H0P7 198 aa10.06□□□□□ -0.8
LDB3-205ENST00000429277 NDUFS7O75251 213 aa10.06□□□□□ -0.8
LDB3-205ENST00000429277 IGHG4P01861 327 aa10.06□□□□□ -0.8
LDB3-205ENST00000429277 IGLL1P15814 213 aa10.06□□□□□ -0.8
LDB3-205ENST00000429277 ARTNQ5T4W7 220 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms