RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 AKAP6Q13023 2319 aa10.48□□□□□ -0.73
THBS3-202ENST00000428962 HSBP1L1C9JCN9 74 aa10.47□□□□□ -0.73
THBS3-202ENST00000428962 CKS2P33552 79 aa10.47□□□□□ -0.73
THBS3-202ENST00000428962 SPATA12Q7Z6I5 190 aa10.47□□□□□ -0.73
THBS3-202ENST00000428962 LINC01356Q8N9X3 169 aa10.47□□□□□ -0.73
THBS3-202ENST00000428962 ZNF738Q8NE65 137 aa10.47□□□□□ -0.73
THBS3-202ENST00000428962 NPFFR1Q9GZQ6 430 aa10.47□□□□□ -0.73
THBS3-202ENST00000428962 ST20Q9HBF5 79 aa10.47□□□□□ -0.73
THBS3-202ENST00000428962 SIGLEC8Q9NYZ4 499 aa10.47□□□□□ -0.73
THBS3-202ENST00000428962 LAMTOR2Q9Y2Q5 125 aa10.47□□□□□ -0.73
THBS3-202ENST00000428962 J3QLI3 93 aa10.47□□□□□ -0.73
THBS3-202ENST00000428962 IGLV1-40P01703 118 aa10.47□□□□□ -0.73
THBS3-202ENST00000428962 COX6B1P14854 86 aa10.47□□□□□ -0.73
THBS3-202ENST00000428962 LINC00173Q6ZV60 143 aa10.47□□□□□ -0.73
THBS3-202ENST00000428962 OR4X2Q8NGF9 303 aa10.47□□□□□ -0.73
THBS3-202ENST00000428962 MUC21A0A0G2JKD1 596 aa10.46□□□□□ -0.74
THBS3-202ENST00000428962 MUC21A0A140T8X8 626 aa10.46□□□□□ -0.74
THBS3-202ENST00000428962 OVOL1O14753 267 aa10.46□□□□□ -0.74
THBS3-202ENST00000428962 TRBV12-3P01733 135 aa10.46□□□□□ -0.74
THBS3-202ENST00000428962 IFI27P40305 119 aaPredicted RBP10.46□□□□□ -0.74
THBS3-202ENST00000428962 BLCAPP62952 87 aa10.46□□□□□ -0.74
THBS3-202ENST00000428962 MAJINQ3KP22 176 aa10.46□□□□□ -0.74
THBS3-202ENST00000428962 MUC21Q5SSG8 566 aa10.46□□□□□ -0.74
THBS3-202ENST00000428962 UNQ9165/PRO28630Q6UXU0 137 aa10.46□□□□□ -0.74
THBS3-202ENST00000428962 UTP20O75691 2785 aaKnown RBP10.45□□□□□ -0.74
THBS3-202ENST00000428962 DLEU1O43261 78 aa10.45□□□□□ -0.74
THBS3-202ENST00000428962 IGLL1P15814 213 aa10.45□□□□□ -0.74
THBS3-202ENST00000428962 OR10J6PQ8NGY7 276 aa10.45□□□□□ -0.74
THBS3-202ENST00000428962 LINC00477Q96M19 166 aa10.45□□□□□ -0.74
THBS3-202ENST00000428962 ZNF747Q9BV97 191 aa10.45□□□□□ -0.74
THBS3-202ENST00000428962 MRPS16Q9Y3D3 137 aaKnown RBP10.45□□□□□ -0.74
THBS3-202ENST00000428962 GOLT1BQ9Y3E0 138 aa10.45□□□□□ -0.74
THBS3-202ENST00000428962 IGKV3D-20A0A0C4DH25 116 aa10.44□□□□□ -0.74
THBS3-202ENST00000428962 LOC389332A0A1B0GUA5 103 aa10.44□□□□□ -0.74
THBS3-202ENST00000428962 SMAD7O15105 426 aaKnown RBP10.44□□□□□ -0.74
THBS3-202ENST00000428962 IGHV3-11P01762 117 aa10.44□□□□□ -0.74
THBS3-202ENST00000428962 TSPOP30536 169 aa10.44□□□□□ -0.74
THBS3-202ENST00000428962 CFHR3Q02985 330 aa10.44□□□□□ -0.74
THBS3-202ENST00000428962 LINC01545Q5VT33 79 aa10.44□□□□□ -0.74
THBS3-202ENST00000428962 SMIM15Q7Z3B0 74 aa10.44□□□□□ -0.74
THBS3-202ENST00000428962 ZNF575Q86XF7 245 aa10.44□□□□□ -0.74
THBS3-202ENST00000428962 MAP1LC3AQ9H492 121 aa10.44□□□□□ -0.74
THBS3-202ENST00000428962 TIMM8BQ9Y5J9 83 aaPredicted RBP10.44□□□□□ -0.74
THBS3-202ENST00000428962 AVPP01185 164 aa10.44□□□□□ -0.74
THBS3-202ENST00000428962 BATFQ16520 125 aa10.44□□□□□ -0.74
THBS3-202ENST00000428962 COL5A1-AS1Q5SY13 56 aa10.44□□□□□ -0.74
THBS3-202ENST00000428962 KLK15Q9H2R5 256 aa10.44□□□□□ -0.74
THBS3-202ENST00000428962 SOCS3O14543 225 aa10.43□□□□□ -0.74
THBS3-202ENST00000428962 TCF21O43680 179 aa10.43□□□□□ -0.74
THBS3-202ENST00000428962 NPYP01303 97 aa10.43□□□□□ -0.74
THBS3-202ENST00000428962 HBDP02042 147 aa10.43□□□□□ -0.74
THBS3-202ENST00000428962 ZNF25P17030 456 aaPredicted RBP10.43□□□□□ -0.74
THBS3-202ENST00000428962 CACNG7P62955 275 aa10.43□□□□□ -0.74
THBS3-202ENST00000428962 SAMD13Q5VXD3 122 aa10.43□□□□□ -0.74
THBS3-202ENST00000428962 RNF185Q96GF1 192 aa10.43□□□□□ -0.74
THBS3-202ENST00000428962 C20orf173Q96LM9 149 aa10.43□□□□□ -0.74
THBS3-202ENST00000428962 DAZ1Q9NQZ3 744 aaKnown RBP10.43□□□□□ -0.74
THBS3-202ENST00000428962 NBPF19A0A087WUL8 3843 aa10.43□□□□□ -0.74
THBS3-202ENST00000428962 UNC79Q9P2D8 2635 aa10.42□□□□□ -0.74
THBS3-202ENST00000428962 IGHV7-4-1A0A0J9YVY3 117 aa10.42□□□□□ -0.74
THBS3-202ENST00000428962 NRGNQ92686 78 aa10.42□□□□□ -0.74
THBS3-202ENST00000428962 MS4A6AQ9H2W1 248 aa10.42□□□□□ -0.74
THBS3-202ENST00000428962 TMEM89A2RUT3 159 aa10.42□□□□□ -0.74
THBS3-202ENST00000428962 H0Y8G0 127 aa10.42□□□□□ -0.74
THBS3-202ENST00000428962 NCR2O95944 276 aa10.42□□□□□ -0.74
THBS3-202ENST00000428962 G0S2P27469 103 aa10.42□□□□□ -0.74
THBS3-202ENST00000428962 GPHB5Q86YW7 130 aa10.42□□□□□ -0.74
THBS3-202ENST00000428962 NXT2Q9NPJ8 142 aaKnown RBP10.42□□□□□ -0.74
THBS3-202ENST00000428962 MSRB1Q9NZV6 116 aa10.42□□□□□ -0.74
THBS3-202ENST00000428962 C11orf21Q9P2W6 132 aa10.42□□□□□ -0.74
THBS3-202ENST00000428962 PEF1Q9UBV8 284 aaKnown RBP10.42□□□□□ -0.74
THBS3-202ENST00000428962 NAV2Q8IVL1 2488 aa10.42□□□□□ -0.74
THBS3-202ENST00000428962 MAST4O15021 2626 aa10.41□□□□□ -0.74
THBS3-202ENST00000428962 TRBV7-9A0A0J9YWB2 115 aa10.41□□□□□ -0.74
THBS3-202ENST00000428962 SMKR1H3BMG3 65 aa10.41□□□□□ -0.74
THBS3-202ENST00000428962 K7EMT4 169 aa10.41□□□□□ -0.74
THBS3-202ENST00000428962 SNAI2O43623 268 aa10.41□□□□□ -0.74
THBS3-202ENST00000428962 PCP4P48539 62 aa10.41□□□□□ -0.74
THBS3-202ENST00000428962 RPL11P62913 178 aaKnown RBP10.41□□□□□ -0.74
THBS3-202ENST00000428962 FOXE3Q13461 319 aa10.41□□□□□ -0.74
THBS3-202ENST00000428962 DEFB112Q30KQ8 113 aa10.41□□□□□ -0.74
THBS3-202ENST00000428962 FAM106AQ4KMX7 169 aa10.41□□□□□ -0.74
THBS3-202ENST00000428962 PRSS57Q6UWY2 283 aa10.41□□□□□ -0.74
THBS3-202ENST00000428962 Q6ZS46 218 aa10.41□□□□□ -0.74
THBS3-202ENST00000428962 TMEM208Q9BTX3 173 aa10.41□□□□□ -0.74
THBS3-202ENST00000428962 RHPN1-AS1Q9BWJ2 59 aa10.41□□□□□ -0.74
THBS3-202ENST00000428962 IGHV4-4A0A075B6R2 117 aa10.4□□□□□ -0.74
THBS3-202ENST00000428962 A0A096LNJ9 63 aa10.4□□□□□ -0.74
THBS3-202ENST00000428962 A0A096LNT2 108 aa10.4□□□□□ -0.74
THBS3-202ENST00000428962 TRAV21A0A0B4J279 112 aa10.4□□□□□ -0.74
THBS3-202ENST00000428962 hDV102S1A0JD36 115 aa10.4□□□□□ -0.74
THBS3-202ENST00000428962 LINC01546A6NGU7 62 aa10.4□□□□□ -0.74
THBS3-202ENST00000428962 NOTCH2Q04721 2471 aa10.4□□□□□ -0.74
THBS3-202ENST00000428962 IGHV4-59P01825 116 aa10.4□□□□□ -0.75
THBS3-202ENST00000428962 LOXL1Q08397 574 aaPredicted RBP10.4□□□□□ -0.75
THBS3-202ENST00000428962 OR8A1Q8NGG7 326 aa10.4□□□□□ -0.75
THBS3-202ENST00000428962 SMPXQ9UHP9 88 aa10.4□□□□□ -0.75
THBS3-202ENST00000428962 UFC1Q9Y3C8 167 aa10.4□□□□□ -0.75
THBS3-202ENST00000428962 TNFRSF6BO95407 300 aa10.39□□□□□ -0.75
THBS3-202ENST00000428962 TGFAP01135 160 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms