RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 XKRY2A2RUG3 117 aa6.63□□□□□ -1.35
TRIM39-208ENST00000428555 CIDEAO60543 219 aa6.63□□□□□ -1.35
TRIM39-208ENST00000428555 DAZ2Q13117 558 aaKnown RBP6.63□□□□□ -1.35
TRIM39-208ENST00000428555 ANXA2RQ3ZCQ2 193 aa6.63□□□□□ -1.35
TRIM39-208ENST00000428555 KHDC3LQ587J8 217 aa6.63□□□□□ -1.35
TRIM39-208ENST00000428555 Q6ZTI0 123 aa6.63□□□□□ -1.35
TRIM39-208ENST00000428555 EIF4E3Q8N5X7 224 aaKnown RBP6.63□□□□□ -1.35
TRIM39-208ENST00000428555 HSD17B11Q8NBQ5 300 aa6.63□□□□□ -1.35
TRIM39-208ENST00000428555 AQP10Q96PS8 301 aa6.63□□□□□ -1.35
TRIM39-208ENST00000428555 LINC00467Q9BRT7 94 aa6.63□□□□□ -1.35
TRIM39-208ENST00000428555 TP53TG3Q9ULZ0 132 aa6.63□□□□□ -1.35
TRIM39-208ENST00000428555 KLF12Q9Y4X4 402 aa6.63□□□□□ -1.35
TRIM39-208ENST00000428555 HECTD4Q9Y4D8 3996 aa6.62□□□□□ -1.35
TRIM39-208ENST00000428555 IGHV1OR15-1A0A075B7D0 117 aa6.62□□□□□ -1.35
TRIM39-208ENST00000428555 TRAV26-1A0A087WT03 109 aa6.62□□□□□ -1.35
TRIM39-208ENST00000428555 DIRC3C9JPN6 131 aa6.62□□□□□ -1.35
TRIM39-208ENST00000428555 GIPP09681 153 aaPredicted RBP6.62□□□□□ -1.35
TRIM39-208ENST00000428555 HOXA5P20719 270 aa6.62□□□□□ -1.35
TRIM39-208ENST00000428555 ATP6V0CP27449 155 aa6.62□□□□□ -1.35
TRIM39-208ENST00000428555 LGALS9BQ3B8N2 356 aa6.62□□□□□ -1.35
TRIM39-208ENST00000428555 C11orf72Q8NBR9 251 aa6.62□□□□□ -1.35
TRIM39-208ENST00000428555 RXFP4Q8TDU9 374 aa6.62□□□□□ -1.35
TRIM39-208ENST00000428555 ATG101Q9BSB4 218 aa6.62□□□□□ -1.35
TRIM39-208ENST00000428555 OTORQ9NRC9 128 aa6.62□□□□□ -1.35
TRIM39-208ENST00000428555 A0A0J9YY99 117 aa6.61□□□□□ -1.35
TRIM39-208ENST00000428555 A4D1N5 150 aa6.61□□□□□ -1.35
TRIM39-208ENST00000428555 RBAKDNA6NC62 111 aa6.61□□□□□ -1.35
TRIM39-208ENST00000428555 HSBP1L1C9JCN9 74 aa6.61□□□□□ -1.35
TRIM39-208ENST00000428555 RGS13O14921 159 aa6.61□□□□□ -1.35
TRIM39-208ENST00000428555 RTL8CO15255 209 aa6.61□□□□□ -1.35
TRIM39-208ENST00000428555 COTL1Q14019 142 aa6.61□□□□□ -1.35
TRIM39-208ENST00000428555 ZNF266Q14584 549 aa6.61□□□□□ -1.35
TRIM39-208ENST00000428555 PQLC2Q6ZP29 291 aa6.61□□□□□ -1.35
TRIM39-208ENST00000428555 Q6ZR54 194 aa6.61□□□□□ -1.35
TRIM39-208ENST00000428555 INO80EQ8NBZ0 244 aaPredicted RBP6.61□□□□□ -1.35
TRIM39-208ENST00000428555 ZNF680Q8NEM1 530 aa6.61□□□□□ -1.35
TRIM39-208ENST00000428555 OR2G3Q8NGZ4 309 aa6.61□□□□□ -1.35
TRIM39-208ENST00000428555 GNPNAT1Q96EK6 184 aaPredicted RBP6.61□□□□□ -1.35
TRIM39-208ENST00000428555 RPH3ALQ9UNE2 315 aa6.61□□□□□ -1.35
TRIM39-208ENST00000428555 PKD1P98161 4303 aa6.6□□□□□ -1.35
TRIM39-208ENST00000428555 TRGV2A0A075B6R0 118 aa6.6□□□□□ -1.35
TRIM39-208ENST00000428555 FXYD6-FXYD2A0A087WZ82 144 aa6.6□□□□□ -1.35
TRIM39-208ENST00000428555 TRGV1A0A0A0MS02 117 aa6.6□□□□□ -1.35
TRIM39-208ENST00000428555 TRBV7-9A0A0J9YWB2 115 aa6.6□□□□□ -1.35
TRIM39-208ENST00000428555 SPINK4O60575 86 aa6.6□□□□□ -1.35
TRIM39-208ENST00000428555 CDC34P49427 236 aaPredicted RBP6.6□□□□□ -1.35
TRIM39-208ENST00000428555 RGS21Q2M5E4 152 aa6.6□□□□□ -1.35
TRIM39-208ENST00000428555 MUC21Q5SSG8 566 aa6.6□□□□□ -1.35
TRIM39-208ENST00000428555 RPL7L1Q6DKI1 246 aaKnown RBP6.6□□□□□ -1.35
TRIM39-208ENST00000428555 GOLT1AQ6ZVE7 132 aa6.6□□□□□ -1.35
TRIM39-208ENST00000428555 OR2T35Q8NGX2 323 aa6.6□□□□□ -1.35
TRIM39-208ENST00000428555 CMTM2Q8TAZ6 248 aa6.6□□□□□ -1.35
TRIM39-208ENST00000428555 ASB13Q8WXK3 278 aa6.6□□□□□ -1.35
TRIM39-208ENST00000428555 RAB24Q969Q5 203 aa6.6□□□□□ -1.35
TRIM39-208ENST00000428555 SH3BGRL3Q9H299 93 aa6.6□□□□□ -1.35
TRIM39-208ENST00000428555 TMPRSS5Q9H3S3 457 aa6.6□□□□□ -1.35
TRIM39-208ENST00000428555 LINC00588Q9Y4M8 146 aa6.6□□□□□ -1.35
TRIM39-208ENST00000428555 DYNC1H1Q14204 4646 aaKnown RBP6.6□□□□□ -1.35
TRIM39-208ENST00000428555 TRAV8-1A0A0A6YYK1 113 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 RNF222A6NCQ9 220 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 MBP02144 154 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 STAG3L2P0CL84 134 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 STAG3L3P0CL85 134 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 ARL14EPLP0DKL9 152 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 CCL18P55774 89 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 TCL1AP56279 114 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 FAM3BP58499 235 aaPredicted RBP6.59□□□□□ -1.35
TRIM39-208ENST00000428555 GNG5P63218 68 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 SERF2P84101 59 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 FAM74A1Q5RGS3 127 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 LINC00336Q6ZUF6 198 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 ZNRF2Q8NHG8 242 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 TVP23CQ96ET8 276 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 SGK494Q96LW2 274 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 PSMG3Q9BT73 122 aaPredicted RBP6.59□□□□□ -1.35
TRIM39-208ENST00000428555 MRPL16Q9NX20 251 aaKnown RBP6.59□□□□□ -1.35
TRIM39-208ENST00000428555 MDFICQ9P1T7 246 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 TNFSF18Q9UNG2 199 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 LENEPQ9Y5L5 61 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 HERC2O95714 4834 aa6.59□□□□□ -1.35
TRIM39-208ENST00000428555 DNAH11Q96DT5 4516 aa6.58□□□□□ -1.36
TRIM39-208ENST00000428555 PRSS29PA6NIE9 313 aa6.58□□□□□ -1.36
TRIM39-208ENST00000428555 G3V3Q6 166 aa6.58□□□□□ -1.36
TRIM39-208ENST00000428555 GNRH2O43555 120 aa6.58□□□□□ -1.36
TRIM39-208ENST00000428555 IGHV3-53P01767 116 aa6.58□□□□□ -1.36
TRIM39-208ENST00000428555 GCHFRP30047 84 aa6.58□□□□□ -1.36
TRIM39-208ENST00000428555 SSTP61278 116 aa6.58□□□□□ -1.36
TRIM39-208ENST00000428555 ESRGQ1W209 222 aa6.58□□□□□ -1.36
TRIM39-208ENST00000428555 IBA57Q5T440 356 aaKnown RBP6.58□□□□□ -1.36
TRIM39-208ENST00000428555 Q6AWC8 147 aa6.58□□□□□ -1.36
TRIM39-208ENST00000428555 SSX7Q7RTT5 188 aa6.58□□□□□ -1.36
TRIM39-208ENST00000428555 TMED6Q8WW62 240 aa6.58□□□□□ -1.36
TRIM39-208ENST00000428555 VSIG2Q96IQ7 327 aa6.58□□□□□ -1.36
TRIM39-208ENST00000428555 C18orf15Q96N68 181 aa6.58□□□□□ -1.36
TRIM39-208ENST00000428555 ACTR3CQ9C0K3 210 aaPredicted RBP6.58□□□□□ -1.36
TRIM39-208ENST00000428555 KIAA1109Q2LD37 5005 aa6.58□□□□□ -1.36
TRIM39-208ENST00000428555 PKHD1P08F94 4074 aa6.57□□□□□ -1.36
TRIM39-208ENST00000428555 BORCS7-ASMTA0A0B4J1R7 106 aa6.57□□□□□ -1.36
TRIM39-208ENST00000428555 NBDYA0A0U1RRE5 68 aa6.57□□□□□ -1.36
TRIM39-208ENST00000428555 A0A1B0GVY2 172 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms