RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 FASNP49327 2511 aaKnown RBP7.89□□□□□ -1.15
HDAC9-210ENST00000428307 SETD2Q9BYW2 2564 aaPredicted RBP7.89□□□□□ -1.15
HDAC9-210ENST00000428307 SYNJ2BPP57105 145 aa7.89□□□□□ -1.15
HDAC9-210ENST00000428307 FOXE3Q13461 319 aa7.89□□□□□ -1.15
HDAC9-210ENST00000428307 RNASEKQ6P5S7 137 aaKnown RBP7.89□□□□□ -1.15
HDAC9-210ENST00000428307 C9orf47Q6ZRZ4 202 aa7.89□□□□□ -1.15
HDAC9-210ENST00000428307 FER1L6-AS1Q8NA97 138 aa7.89□□□□□ -1.15
HDAC9-210ENST00000428307 C11orf21Q9P2W6 132 aa7.89□□□□□ -1.15
HDAC9-210ENST00000428307 TMEM89A2RUT3 159 aa7.88□□□□□ -1.15
HDAC9-210ENST00000428307 ZNF324O75467 553 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-210ENST00000428307 ELANEP08246 267 aa7.88□□□□□ -1.15
HDAC9-210ENST00000428307 TFPI2P48307 235 aa7.88□□□□□ -1.15
HDAC9-210ENST00000428307 KLF5Q13887 457 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-210ENST00000428307 NIT1Q86X76 327 aa7.88□□□□□ -1.15
HDAC9-210ENST00000428307 CLEC5AQ9NY25 188 aa7.88□□□□□ -1.15
HDAC9-210ENST00000428307 RNF114Q9Y508 228 aa7.88□□□□□ -1.15
HDAC9-210ENST00000428307 IGHV4OR15-8A0A075B7B6 117 aa7.88□□□□□ -1.15
HDAC9-210ENST00000428307 A0A087WW49 117 aa7.88□□□□□ -1.15
HDAC9-210ENST00000428307 IGKV3D-20A0A0C4DH25 116 aa7.88□□□□□ -1.15
HDAC9-210ENST00000428307 K7EMT4 169 aa7.88□□□□□ -1.15
HDAC9-210ENST00000428307 HSBP1O75506 76 aa7.88□□□□□ -1.15
HDAC9-210ENST00000428307 KRTDAPP60985 99 aa7.88□□□□□ -1.15
HDAC9-210ENST00000428307 TWIST1Q15672 202 aa7.88□□□□□ -1.15
HDAC9-210ENST00000428307 C18orf65Q6ZTR6 163 aa7.88□□□□□ -1.15
HDAC9-210ENST00000428307 OR10J6PQ8NGY7 276 aa7.88□□□□□ -1.15
HDAC9-210ENST00000428307 UFC1Q9Y3C8 167 aa7.88□□□□□ -1.15
HDAC9-210ENST00000428307 CSN3P07498 182 aa7.87□□□□□ -1.15
HDAC9-210ENST00000428307 LGALS1P09382 135 aaKnown RBP7.87□□□□□ -1.15
HDAC9-210ENST00000428307 RPS20P60866 119 aaKnown RBP7.87□□□□□ -1.15
HDAC9-210ENST00000428307 HIST1H1AQ02539 215 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-210ENST00000428307 DEFB136Q30KP8 78 aa7.87□□□□□ -1.15
HDAC9-210ENST00000428307 KLHDC1Q8N7A1 406 aa7.87□□□□□ -1.15
HDAC9-210ENST00000428307 UBE2E2Q96LR5 201 aa7.87□□□□□ -1.15
HDAC9-210ENST00000428307 MSRB1Q9NZV6 116 aa7.87□□□□□ -1.15
HDAC9-210ENST00000428307 HOXD3P31249 432 aaPredicted RBP7.86□□□□□ -1.15
HDAC9-210ENST00000428307 PMCHL1Q16048 86 aa7.86□□□□□ -1.15
HDAC9-210ENST00000428307 PRR9Q5T870 116 aa7.86□□□□□ -1.15
HDAC9-210ENST00000428307 AMN1Q8IY45 258 aa7.86□□□□□ -1.15
HDAC9-210ENST00000428307 URB1-AS1Q96HZ7 61 aa7.86□□□□□ -1.15
HDAC9-210ENST00000428307 NAGKQ9UJ70 344 aa7.86□□□□□ -1.15
HDAC9-210ENST00000428307 A0A1B0GW15 77 aa7.86□□□□□ -1.15
HDAC9-210ENST00000428307 IGLC6P0CF74 106 aa7.86□□□□□ -1.15
HDAC9-210ENST00000428307 LINC01559Q495D7 138 aa7.86□□□□□ -1.15
HDAC9-210ENST00000428307 KHDC1LQ5JSQ8 128 aa7.86□□□□□ -1.15
HDAC9-210ENST00000428307 DNLZQ5SXM8 178 aa7.86□□□□□ -1.15
HDAC9-210ENST00000428307 ZNF664Q8N3J9 261 aa7.86□□□□□ -1.15
HDAC9-210ENST00000428307 LINC00477Q96M19 166 aa7.86□□□□□ -1.15
HDAC9-210ENST00000428307 OVOL1O14753 267 aa7.85□□□□□ -1.15
HDAC9-210ENST00000428307 KIR3DS1Q14943 382 aa7.85□□□□□ -1.15
HDAC9-210ENST00000428307 OR8A1Q8NGG7 326 aa7.85□□□□□ -1.15
HDAC9-210ENST00000428307 MYOZ3Q8TDC0 251 aa7.85□□□□□ -1.15
HDAC9-210ENST00000428307 WFDC12Q8WWY7 111 aa7.85□□□□□ -1.15
HDAC9-210ENST00000428307 DUX3Q96PT4 197 aa7.85□□□□□ -1.15
HDAC9-210ENST00000428307 YAE1D1Q9NRH1 226 aa7.85□□□□□ -1.15
HDAC9-210ENST00000428307 M0R2Z0 102 aa7.85□□□□□ -1.15
HDAC9-210ENST00000428307 CTRLP40313 264 aa7.85□□□□□ -1.15
HDAC9-210ENST00000428307 TDRG1Q3Y452 100 aa7.85□□□□□ -1.15
HDAC9-210ENST00000428307 ZNF493Q6ZR52 646 aa7.85□□□□□ -1.15
HDAC9-210ENST00000428307 Q8N2B8 174 aa7.85□□□□□ -1.15
HDAC9-210ENST00000428307 DCANP1Q8TF63 244 aa7.85□□□□□ -1.15
HDAC9-210ENST00000428307 MS4A6AQ9H2W1 248 aa7.85□□□□□ -1.15
HDAC9-210ENST00000428307 DNAJC9-AS1A6NH13 148 aa7.84□□□□□ -1.15
HDAC9-210ENST00000428307 LINC00614P0C842 121 aa7.84□□□□□ -1.15
HDAC9-210ENST00000428307 ZFAND2AQ8N6M9 145 aa7.84□□□□□ -1.15
HDAC9-210ENST00000428307 PPP1R14DQ9NXH3 145 aa7.84□□□□□ -1.15
HDAC9-210ENST00000428307 SORL1Q92673 2214 aa7.84□□□□□ -1.15
HDAC9-210ENST00000428307 D6R8Y8 96 aa7.84□□□□□ -1.15
HDAC9-210ENST00000428307 TSTD3H0UI37 97 aa7.84□□□□□ -1.15
HDAC9-210ENST00000428307 ZNF688P0C7X2 276 aa7.84□□□□□ -1.15
HDAC9-210ENST00000428307 SLURP1P55000 103 aa7.84□□□□□ -1.15
HDAC9-210ENST00000428307 PKIAP61925 76 aa7.84□□□□□ -1.15
HDAC9-210ENST00000428307 SRSF2Q01130 221 aaKnown RBP7.84□□□□□ -1.15
HDAC9-210ENST00000428307 KRTAP1-1Q07627 177 aa7.84□□□□□ -1.15
HDAC9-210ENST00000428307 TCTEX1D4Q5JR98 221 aa7.84□□□□□ -1.15
HDAC9-210ENST00000428307 FAM104BQ5XKR9 115 aa7.84□□□□□ -1.15
HDAC9-210ENST00000428307 C11orf44Q8N8P7 122 aa7.84□□□□□ -1.15
HDAC9-210ENST00000428307 ESM1Q9NQ30 184 aa7.84□□□□□ -1.15
HDAC9-210ENST00000428307 TIMM8BQ9Y5J9 83 aaPredicted RBP7.84□□□□□ -1.15
HDAC9-210ENST00000428307 C3orf79P0CE67 100 aa7.83□□□□□ -1.16
HDAC9-210ENST00000428307 RNASE4P34096 147 aaKnown RBP7.83□□□□□ -1.16
HDAC9-210ENST00000428307 ID1P41134 155 aa7.83□□□□□ -1.16
HDAC9-210ENST00000428307 Q6ZSV7 163 aa7.83□□□□□ -1.16
HDAC9-210ENST00000428307 RNF152Q8N8N0 203 aa7.83□□□□□ -1.16
HDAC9-210ENST00000428307 GATD1Q8NB37 220 aa7.83□□□□□ -1.16
HDAC9-210ENST00000428307 OR11H1Q8NG94 326 aa7.83□□□□□ -1.16
HDAC9-210ENST00000428307 FOXC2Q99958 501 aa7.83□□□□□ -1.16
HDAC9-210ENST00000428307 LENEPQ9Y5L5 61 aa7.83□□□□□ -1.16
HDAC9-210ENST00000428307 LOC389332A0A1B0GUA5 103 aa7.83□□□□□ -1.16
HDAC9-210ENST00000428307 SMKR1H3BMG3 65 aa7.83□□□□□ -1.16
HDAC9-210ENST00000428307 MRPL51Q4U2R6 128 aaKnown RBP7.83□□□□□ -1.16
HDAC9-210ENST00000428307 PSMG4Q5JS54 123 aa7.83□□□□□ -1.16
HDAC9-210ENST00000428307 TEX29Q8N6K0 151 aa7.83□□□□□ -1.16
HDAC9-210ENST00000428307 OR10AG1Q8NH19 301 aa7.83□□□□□ -1.16
HDAC9-210ENST00000428307 AKAP9Q99996 3911 aa7.83□□□□□ -1.16
HDAC9-210ENST00000428307 C2orf70A6NJV1 201 aa7.82□□□□□ -1.16
HDAC9-210ENST00000428307 SPRY2O43597 315 aa7.82□□□□□ -1.16
HDAC9-210ENST00000428307 IGKV3-20P01619 116 aa7.82□□□□□ -1.16
HDAC9-210ENST00000428307 IGHV1-24A0A0C4DH33 117 aa7.82□□□□□ -1.16
HDAC9-210ENST00000428307 NCR2O95944 276 aa7.82□□□□□ -1.16
HDAC9-210ENST00000428307 CKS2P33552 79 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms