RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 MUC21Q5SSG8 566 aa12.77□□□□□ -0.37
PSPC1-202ENST00000427943 KIAA1109Q2LD37 5005 aa12.76□□□□□ -0.37
PSPC1-202ENST00000427943 DIRC3C9JPN6 131 aa12.76□□□□□ -0.37
PSPC1-202ENST00000427943 HMGB3O15347 200 aaKnown RBP12.76□□□□□ -0.37
PSPC1-202ENST00000427943 C6orf223Q8N319 242 aa12.76□□□□□ -0.37
PSPC1-202ENST00000427943 TRBV7-9A0A0J9YWB2 115 aa12.75□□□□□ -0.37
PSPC1-202ENST00000427943 A0A1W2PPV4 95 aa12.75□□□□□ -0.37
PSPC1-202ENST00000427943 H3BNG1 76 aa12.75□□□□□ -0.37
PSPC1-202ENST00000427943 PTTG1O95997 202 aa12.75□□□□□ -0.37
PSPC1-202ENST00000427943 IGHV3-53P01767 116 aa12.75□□□□□ -0.37
PSPC1-202ENST00000427943 ZNF415Q09FC8 603 aa12.75□□□□□ -0.37
PSPC1-202ENST00000427943 ZNF266Q14584 549 aa12.75□□□□□ -0.37
PSPC1-202ENST00000427943 ESRGQ1W209 222 aa12.75□□□□□ -0.37
PSPC1-202ENST00000427943 VSIG2Q96IQ7 327 aa12.75□□□□□ -0.37
PSPC1-202ENST00000427943 C18orf15Q96N68 181 aa12.75□□□□□ -0.37
PSPC1-202ENST00000427943 PGPA6NDG6 321 aa12.74□□□□□ -0.37
PSPC1-202ENST00000427943 TNP2Q05952 138 aa12.74□□□□□ -0.37
PSPC1-202ENST00000427943 HSD17B11Q8NBQ5 300 aa12.74□□□□□ -0.37
PSPC1-202ENST00000427943 CMTM2Q8TAZ6 248 aa12.74□□□□□ -0.37
PSPC1-202ENST00000427943 MED28Q9H204 178 aa12.74□□□□□ -0.37
PSPC1-202ENST00000427943 Q9H8V8 135 aa12.74□□□□□ -0.37
PSPC1-202ENST00000427943 OTORQ9NRC9 128 aa12.74□□□□□ -0.37
PSPC1-202ENST00000427943 A0A096LPF7 62 aa12.73□□□□□ -0.37
PSPC1-202ENST00000427943 PQLC2Q6ZP29 291 aa12.73□□□□□ -0.37
PSPC1-202ENST00000427943 ZNF575Q86XF7 245 aa12.73□□□□□ -0.37
PSPC1-202ENST00000427943 OR10G4Q8NGN3 311 aa12.73□□□□□ -0.37
PSPC1-202ENST00000427943 OR10G9Q8NGN4 311 aa12.73□□□□□ -0.37
PSPC1-202ENST00000427943 OR10G7Q8NGN6 311 aa12.73□□□□□ -0.37
PSPC1-202ENST00000427943 KRTAP1-5Q9BYS1 174 aa12.73□□□□□ -0.37
PSPC1-202ENST00000427943 GNG5P63218 68 aa12.72□□□□□ -0.37
PSPC1-202ENST00000427943 FAM74A1Q5RGS3 127 aa12.72□□□□□ -0.37
PSPC1-202ENST00000427943 Q6AWC8 147 aa12.72□□□□□ -0.37
PSPC1-202ENST00000427943 GOLT1AQ6ZVE7 132 aa12.72□□□□□ -0.37
PSPC1-202ENST00000427943 ST6GAL2Q96JF0 529 aa12.72□□□□□ -0.37
PSPC1-202ENST00000427943 MDFICQ9P1T7 246 aa12.72□□□□□ -0.37
PSPC1-202ENST00000427943 MRPS16Q9Y3D3 137 aaKnown RBP12.72□□□□□ -0.37
PSPC1-202ENST00000427943 LENEPQ9Y5L5 61 aa12.72□□□□□ -0.37
PSPC1-202ENST00000427943 ARL14EPLP0DKL9 152 aa12.71□□□□□ -0.37
PSPC1-202ENST00000427943 CDC34P49427 236 aaPredicted RBP12.71□□□□□ -0.37
PSPC1-202ENST00000427943 TMEM183BQ1AE95 376 aa12.71□□□□□ -0.37
PSPC1-202ENST00000427943 TMEM183AQ8IXX5 376 aa12.71□□□□□ -0.37
PSPC1-202ENST00000427943 AQP10Q96PS8 301 aa12.71□□□□□ -0.37
PSPC1-202ENST00000427943 UPK3BQ9BT76 320 aa12.71□□□□□ -0.37
PSPC1-202ENST00000427943 KRTAP17-1Q9BYP8 105 aa12.71□□□□□ -0.37
PSPC1-202ENST00000427943 NAGKQ9UJ70 344 aa12.71□□□□□ -0.37
PSPC1-202ENST00000427943 TRAV8-1A0A0A6YYK1 113 aa12.7□□□□□ -0.38
PSPC1-202ENST00000427943 F6UZH7 168 aa12.7□□□□□ -0.38
PSPC1-202ENST00000427943 MED14OSP0DP75 135 aa12.7□□□□□ -0.38
PSPC1-202ENST00000427943 Q5BKY6 102 aa12.7□□□□□ -0.38
PSPC1-202ENST00000427943 TMED6Q8WW62 240 aa12.7□□□□□ -0.38
PSPC1-202ENST00000427943 PAX4O43316 350 aa12.69□□□□□ -0.38
PSPC1-202ENST00000427943 ATP6V0CP27449 155 aa12.69□□□□□ -0.38
PSPC1-202ENST00000427943 TTC32Q5I0X7 151 aa12.69□□□□□ -0.38
PSPC1-202ENST00000427943 FAM159AQ6UWV7 190 aa12.69□□□□□ -0.38
PSPC1-202ENST00000427943 OR2G3Q8NGZ4 309 aa12.69□□□□□ -0.38
PSPC1-202ENST00000427943 ICOSQ9Y6W8 199 aa12.69□□□□□ -0.38
PSPC1-202ENST00000427943 TRGV11A0A075B6L2 103 aa12.68□□□□□ -0.38
PSPC1-202ENST00000427943 SFTA3P0C7M3 94 aa12.68□□□□□ -0.38
PSPC1-202ENST00000427943 TVP23CQ96ET8 276 aa12.68□□□□□ -0.38
PSPC1-202ENST00000427943 SGK494Q96LW2 274 aa12.68□□□□□ -0.38
PSPC1-202ENST00000427943 C8orf49Q96NF6 230 aa12.68□□□□□ -0.38
PSPC1-202ENST00000427943 PSMG3Q9BT73 122 aaPredicted RBP12.68□□□□□ -0.38
PSPC1-202ENST00000427943 SH3BGRL3Q9H299 93 aa12.68□□□□□ -0.38
PSPC1-202ENST00000427943 PRO0255Q9UI72 69 aa12.68□□□□□ -0.38
PSPC1-202ENST00000427943 STAG3L2P0CL84 134 aa12.67□□□□□ -0.38
PSPC1-202ENST00000427943 STAG3L3P0CL85 134 aa12.67□□□□□ -0.38
PSPC1-202ENST00000427943 CRYBA4P53673 196 aa12.67□□□□□ -0.38
PSPC1-202ENST00000427943 FHL2Q14192 279 aa12.67□□□□□ -0.38
PSPC1-202ENST00000427943 RAB24Q969Q5 203 aa12.67□□□□□ -0.38
PSPC1-202ENST00000427943 GIPP09681 153 aaPredicted RBP12.66□□□□□ -0.38
PSPC1-202ENST00000427943 GCHFRP30047 84 aa12.66□□□□□ -0.38
PSPC1-202ENST00000427943 ZNF479Q96JC4 524 aa12.66□□□□□ -0.38
PSPC1-202ENST00000427943 TREM1Q9NP99 234 aa12.66□□□□□ -0.38
PSPC1-202ENST00000427943 HHLA3Q9XRX5 114 aa12.66□□□□□ -0.38
PSPC1-202ENST00000427943 DYNC1H1Q14204 4646 aaKnown RBP12.65□□□□□ -0.38
PSPC1-202ENST00000427943 FXYD6-FXYD2A0A087WZ82 144 aa12.65□□□□□ -0.38
PSPC1-202ENST00000427943 TRGV4A0A0C4DH28 118 aa12.65□□□□□ -0.38
PSPC1-202ENST00000427943 GNRH2O43555 120 aa12.65□□□□□ -0.38
PSPC1-202ENST00000427943 ARL6IP6Q8N6S5 226 aa12.65□□□□□ -0.38
PSPC1-202ENST00000427943 SPXQ9BT56 116 aa12.65□□□□□ -0.38
PSPC1-202ENST00000427943 DNAH11Q96DT5 4516 aa12.64□□□□□ -0.39
PSPC1-202ENST00000427943 TRAV21A0A0B4J279 112 aa12.64□□□□□ -0.39
PSPC1-202ENST00000427943 RNF222A6NCQ9 220 aa12.64□□□□□ -0.39
PSPC1-202ENST00000427943 TDRG1Q3Y452 100 aa12.64□□□□□ -0.39
PSPC1-202ENST00000427943 IGHV3-16A0A0C4DH30 117 aa12.63□□□□□ -0.39
PSPC1-202ENST00000427943 A0A1W2PPQ1 181 aa12.63□□□□□ -0.39
PSPC1-202ENST00000427943 C16orf90A8MZG2 172 aa12.63□□□□□ -0.39
PSPC1-202ENST00000427943 NXPH4O95158 308 aa12.63□□□□□ -0.39
PSPC1-202ENST00000427943 MBP02144 154 aa12.63□□□□□ -0.39
PSPC1-202ENST00000427943 TYMSP04818 313 aa12.63□□□□□ -0.39
PSPC1-202ENST00000427943 SERF2P84101 59 aa12.63□□□□□ -0.39
PSPC1-202ENST00000427943 SLAQ13239 276 aa12.63□□□□□ -0.39
PSPC1-202ENST00000427943 RPL7L1Q6DKI1 246 aaKnown RBP12.63□□□□□ -0.39
PSPC1-202ENST00000427943 C5orf17Q8NAS9 161 aa12.63□□□□□ -0.39
PSPC1-202ENST00000427943 INO80EQ8NBZ0 244 aaPredicted RBP12.63□□□□□ -0.39
PSPC1-202ENST00000427943 RASL10AQ92737 203 aa12.63□□□□□ -0.39
PSPC1-202ENST00000427943 GGTLC3B5MD39 225 aa12.62□□□□□ -0.39
PSPC1-202ENST00000427943 TCRAP04437 139 aa12.62□□□□□ -0.39
PSPC1-202ENST00000427943 IQCF2Q8IXL9 164 aa12.62□□□□□ -0.39
PSPC1-202ENST00000427943 SUN5Q8TC36 379 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms