RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 ZNF680Q8NEM1 530 aa11.03□□□□□ -0.64
HLA-DQB2-230ENST00000427449 A0A096LPF7 62 aa11.02□□□□□ -0.65
HLA-DQB2-230ENST00000427449 NBDYA0A0U1RRE5 68 aa11.02□□□□□ -0.65
HLA-DQB2-230ENST00000427449 SNURFLB1AK76 121 aa11.02□□□□□ -0.65
HLA-DQB2-230ENST00000427449 TMEM78Q5T7P6 136 aa11.02□□□□□ -0.65
HLA-DQB2-230ENST00000427449 CCDC28AQ8IWP9 274 aa11.02□□□□□ -0.65
HLA-DQB2-230ENST00000427449 UPK3BQ9BT76 320 aa11.02□□□□□ -0.65
HLA-DQB2-230ENST00000427449 IGHV1OR15-1A0A075B7D0 117 aa11.01□□□□□ -0.65
HLA-DQB2-230ENST00000427449 A0A0J9YY99 117 aa11.01□□□□□ -0.65
HLA-DQB2-230ENST00000427449 GPX1P07203 203 aa11.01□□□□□ -0.65
HLA-DQB2-230ENST00000427449 ESRGQ1W209 222 aa11.01□□□□□ -0.65
HLA-DQB2-230ENST00000427449 TMED6Q8WW62 240 aa11.01□□□□□ -0.65
HLA-DQB2-230ENST00000427449 SH3BGRL3Q9H299 93 aa11.01□□□□□ -0.65
HLA-DQB2-230ENST00000427449 TRAV8-1A0A0A6YYK1 113 aa11□□□□□ -0.65
HLA-DQB2-230ENST00000427449 HMGB3O15347 200 aaKnown RBP11□□□□□ -0.65
HLA-DQB2-230ENST00000427449 IFNA5P01569 189 aa11□□□□□ -0.65
HLA-DQB2-230ENST00000427449 STAG3L2P0CL84 134 aa11□□□□□ -0.65
HLA-DQB2-230ENST00000427449 STAG3L3P0CL85 134 aa11□□□□□ -0.65
HLA-DQB2-230ENST00000427449 ATP6V0CP27449 155 aa11□□□□□ -0.65
HLA-DQB2-230ENST00000427449 TNP2Q05952 138 aa11□□□□□ -0.65
HLA-DQB2-230ENST00000427449 GNPNAT1Q96EK6 184 aaPredicted RBP11□□□□□ -0.65
HLA-DQB2-230ENST00000427449 OTORQ9NRC9 128 aa11□□□□□ -0.65
HLA-DQB2-230ENST00000427449 MRPL16Q9NX20 251 aaKnown RBP11□□□□□ -0.65
HLA-DQB2-230ENST00000427449 MDFICQ9P1T7 246 aa11□□□□□ -0.65
HLA-DQB2-230ENST00000427449 LENEPQ9Y5L5 61 aa11□□□□□ -0.65
HLA-DQB2-230ENST00000427449 IGLV2-11P01706 119 aa10.99□□□□□ -0.65
HLA-DQB2-230ENST00000427449 GIPP09681 153 aaPredicted RBP10.99□□□□□ -0.65
HLA-DQB2-230ENST00000427449 ARL14EPLP0DKL9 152 aa10.99□□□□□ -0.65
HLA-DQB2-230ENST00000427449 GNG5P63218 68 aa10.99□□□□□ -0.65
HLA-DQB2-230ENST00000427449 OR5I1Q13606 314 aa10.99□□□□□ -0.65
HLA-DQB2-230ENST00000427449 TDRG1Q3Y452 100 aa10.99□□□□□ -0.65
HLA-DQB2-230ENST00000427449 PQLC2Q6ZP29 291 aa10.99□□□□□ -0.65
HLA-DQB2-230ENST00000427449 ST6GAL2Q96JF0 529 aa10.99□□□□□ -0.65
HLA-DQB2-230ENST00000427449 PSMG3Q9BT73 122 aaPredicted RBP10.99□□□□□ -0.65
HLA-DQB2-230ENST00000427449 TRGV1A0A0A0MS02 117 aa10.98□□□□□ -0.65
HLA-DQB2-230ENST00000427449 TAS2R45P59539 299 aa10.98□□□□□ -0.65
HLA-DQB2-230ENST00000427449 ZNF726P1Q15940 193 aa10.98□□□□□ -0.65
HLA-DQB2-230ENST00000427449 ACOT6Q3I5F7 207 aaPredicted RBP10.98□□□□□ -0.65
HLA-DQB2-230ENST00000427449 C1orf134Q5TEV5 83 aa10.98□□□□□ -0.65
HLA-DQB2-230ENST00000427449 ARL6IP6Q8N6S5 226 aa10.98□□□□□ -0.65
HLA-DQB2-230ENST00000427449 HSD17B11Q8NBQ5 300 aa10.98□□□□□ -0.65
HLA-DQB2-230ENST00000427449 SCGB1C1Q8TD33 95 aa10.98□□□□□ -0.65
HLA-DQB2-230ENST00000427449 MRPS16Q9Y3D3 137 aaKnown RBP10.98□□□□□ -0.65
HLA-DQB2-230ENST00000427449 GGTLC3B5MD39 225 aa10.97□□□□□ -0.65
HLA-DQB2-230ENST00000427449 FHL2Q14192 279 aa10.97□□□□□ -0.65
HLA-DQB2-230ENST00000427449 MUC21Q5SSG8 566 aa10.97□□□□□ -0.65
HLA-DQB2-230ENST00000427449 ZNF575Q86XF7 245 aa10.97□□□□□ -0.65
HLA-DQB2-230ENST00000427449 OR10G4Q8NGN3 311 aa10.97□□□□□ -0.65
HLA-DQB2-230ENST00000427449 OR10G9Q8NGN4 311 aa10.97□□□□□ -0.65
HLA-DQB2-230ENST00000427449 OR10G7Q8NGN6 311 aa10.97□□□□□ -0.65
HLA-DQB2-230ENST00000427449 ATG101Q9BSB4 218 aa10.97□□□□□ -0.65
HLA-DQB2-230ENST00000427449 C11orf21Q9P2W6 132 aa10.97□□□□□ -0.65
HLA-DQB2-230ENST00000427449 TNFSF18Q9UNG2 199 aa10.97□□□□□ -0.65
HLA-DQB2-230ENST00000427449 PGPA6NDG6 321 aa10.96□□□□□ -0.65
HLA-DQB2-230ENST00000427449 RGS13O14921 159 aa10.96□□□□□ -0.65
HLA-DQB2-230ENST00000427449 CDC34P49427 236 aaPredicted RBP10.96□□□□□ -0.65
HLA-DQB2-230ENST00000427449 Q6ZRN7 208 aaPredicted RBP10.96□□□□□ -0.65
HLA-DQB2-230ENST00000427449 GOLT1AQ6ZVE7 132 aa10.96□□□□□ -0.65
HLA-DQB2-230ENST00000427449 RAB24Q969Q5 203 aa10.96□□□□□ -0.65
HLA-DQB2-230ENST00000427449 MED28Q9H204 178 aa10.96□□□□□ -0.65
HLA-DQB2-230ENST00000427449 ABCA13Q86UQ4 5058 aa10.96□□□□□ -0.66
HLA-DQB2-230ENST00000427449 ZNF80P51504 273 aaPredicted RBP10.95□□□□□ -0.66
HLA-DQB2-230ENST00000427449 CCL18P55774 89 aa10.95□□□□□ -0.66
HLA-DQB2-230ENST00000427449 RPL7L1Q6DKI1 246 aaKnown RBP10.95□□□□□ -0.66
HLA-DQB2-230ENST00000427449 C6orf223Q8N319 242 aa10.95□□□□□ -0.66
HLA-DQB2-230ENST00000427449 IGHV3-16A0A0C4DH30 117 aa10.94□□□□□ -0.66
HLA-DQB2-230ENST00000427449 F6UZH7 168 aa10.94□□□□□ -0.66
HLA-DQB2-230ENST00000427449 GCHFRP30047 84 aa10.94□□□□□ -0.66
HLA-DQB2-230ENST00000427449 CSN1S1P47710 185 aa10.94□□□□□ -0.66
HLA-DQB2-230ENST00000427449 CRYBA4P53673 196 aa10.94□□□□□ -0.66
HLA-DQB2-230ENST00000427449 ZNF415Q09FC8 603 aa10.94□□□□□ -0.66
HLA-DQB2-230ENST00000427449 ASB13Q8WXK3 278 aa10.94□□□□□ -0.66
HLA-DQB2-230ENST00000427449 RASL10AQ92737 203 aa10.94□□□□□ -0.66
HLA-DQB2-230ENST00000427449 HYLS1Q96M11 299 aa10.94□□□□□ -0.66
HLA-DQB2-230ENST00000427449 Q9H8V8 135 aa10.94□□□□□ -0.66
HLA-DQB2-230ENST00000427449 TRGV2A0A075B6R0 118 aa10.93□□□□□ -0.66
HLA-DQB2-230ENST00000427449 IGHV3-53P01767 116 aa10.93□□□□□ -0.66
HLA-DQB2-230ENST00000427449 TYMSP04818 313 aa10.93□□□□□ -0.66
HLA-DQB2-230ENST00000427449 ZNF479Q96JC4 524 aa10.93□□□□□ -0.66
HLA-DQB2-230ENST00000427449 CYTL1Q9NRR1 136 aa10.93□□□□□ -0.66
HLA-DQB2-230ENST00000427449 GNRH2O43555 120 aa10.92□□□□□ -0.66
HLA-DQB2-230ENST00000427449 TCRAP04437 139 aa10.92□□□□□ -0.66
HLA-DQB2-230ENST00000427449 SFTA3P0C7M3 94 aa10.92□□□□□ -0.66
HLA-DQB2-230ENST00000427449 SERF2P84101 59 aa10.92□□□□□ -0.66
HLA-DQB2-230ENST00000427449 TMEM183BQ1AE95 376 aa10.92□□□□□ -0.66
HLA-DQB2-230ENST00000427449 IQCF2Q8IXL9 164 aa10.92□□□□□ -0.66
HLA-DQB2-230ENST00000427449 TMEM183AQ8IXX5 376 aa10.92□□□□□ -0.66
HLA-DQB2-230ENST00000427449 SGK494Q96LW2 274 aa10.92□□□□□ -0.66
HLA-DQB2-230ENST00000427449 C8orf49Q96NF6 230 aa10.92□□□□□ -0.66
HLA-DQB2-230ENST00000427449 RPH3ALQ9UNE2 315 aa10.92□□□□□ -0.66
HLA-DQB2-230ENST00000427449 A0A1W2PPV4 95 aa10.91□□□□□ -0.66
HLA-DQB2-230ENST00000427449 MED14OSP0DP75 135 aa10.91□□□□□ -0.66
HLA-DQB2-230ENST00000427449 C5orf17Q8NAS9 161 aa10.91□□□□□ -0.66
HLA-DQB2-230ENST00000427449 ARPC5LQ9BPX5 153 aa10.91□□□□□ -0.66
HLA-DQB2-230ENST00000427449 KRTAP4-5Q9BYR2 181 aa10.91□□□□□ -0.66
HLA-DQB2-230ENST00000427449 TMEM75Q8N9X5 138 aa10.9□□□□□ -0.66
HLA-DQB2-230ENST00000427449 OR2T35Q8NGX2 323 aa10.9□□□□□ -0.66
HLA-DQB2-230ENST00000427449 PRO0255Q9UI72 69 aa10.9□□□□□ -0.66
HLA-DQB2-230ENST00000427449 FXYD6-FXYD2A0A087WZ82 144 aa10.89□□□□□ -0.67
HLA-DQB2-230ENST00000427449 A0A1W2PPQ1 181 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms