RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 DEFB131AP59861 70 aa11.61□□□□□ -0.55
PTPN13-203ENST00000427191 SLC25A29Q8N8R3 303 aa11.61□□□□□ -0.55
PTPN13-203ENST00000427191 MRPL53Q96EL3 112 aaKnown RBP11.61□□□□□ -0.55
PTPN13-203ENST00000427191 J3KT08 172 aa11.61□□□□□ -0.55
PTPN13-203ENST00000427191 FOXL2NBQ6ZUU3 175 aa11.61□□□□□ -0.55
PTPN13-203ENST00000427191 PRR25Q96S07 402 aa11.61□□□□□ -0.55
PTPN13-203ENST00000427191 C3orf56Q8N813 242 aa11.6□□□□□ -0.55
PTPN13-203ENST00000427191 IGHV2-70P01814 119 aa11.6□□□□□ -0.55
PTPN13-203ENST00000427191 C10orf91Q5T1B1 145 aa11.6□□□□□ -0.55
PTPN13-203ENST00000427191 PLXNA2O75051 1894 aa11.6□□□□□ -0.55
PTPN13-203ENST00000427191 H3BRN7 92 aa11.59□□□□□ -0.55
PTPN13-203ENST00000427191 LMO1P25800 156 aa11.59□□□□□ -0.55
PTPN13-203ENST00000427191 LINC00311Q8N616 119 aa11.59□□□□□ -0.55
PTPN13-203ENST00000427191 FGFBP3Q8TAT2 258 aa11.59□□□□□ -0.55
PTPN13-203ENST00000427191 LYNX1G3V0Z9 82 aa11.59□□□□□ -0.55
PTPN13-203ENST00000427191 ATP5G1P05496 136 aa11.59□□□□□ -0.55
PTPN13-203ENST00000427191 LYNX1P0DP58 116 aa11.59□□□□□ -0.55
PTPN13-203ENST00000427191 CRYBA4P53673 196 aa11.59□□□□□ -0.55
PTPN13-203ENST00000427191 UNQ6494/PRO21346Q6UXR6 183 aa11.59□□□□□ -0.55
PTPN13-203ENST00000427191 V9GYV3 84 aa11.59□□□□□ -0.55
PTPN13-203ENST00000427191 SIGLEC8Q9NYZ4 499 aa11.59□□□□□ -0.55
PTPN13-203ENST00000427191 LHBP01229 141 aa11.59□□□□□ -0.55
PTPN13-203ENST00000427191 RIF1Q5UIP0 2472 aaKnown RBP11.59□□□□□ -0.55
PTPN13-203ENST00000427191 IGHV1-69DA0A0B4J2H0 117 aa11.59□□□□□ -0.55
PTPN13-203ENST00000427191 C5orf63A6NC05 138 aa11.59□□□□□ -0.55
PTPN13-203ENST00000427191 LINC00527Q9UJ94 153 aa11.59□□□□□ -0.55
PTPN13-203ENST00000427191 C9JQL5 133 aa11.58□□□□□ -0.56
PTPN13-203ENST00000427191 KNCNA6PVL3 124 aa11.58□□□□□ -0.56
PTPN13-203ENST00000427191 MSMBP08118 114 aa11.58□□□□□ -0.56
PTPN13-203ENST00000427191 PRB3Q04118 309 aaPredicted RBP11.58□□□□□ -0.56
PTPN13-203ENST00000427191 C15orf53Q8NAA6 179 aa11.58□□□□□ -0.56
PTPN13-203ENST00000427191 MST1LQ2TV78 715 aa11.58□□□□□ -0.56
PTPN13-203ENST00000427191 C11orf44Q8N8P7 122 aa11.58□□□□□ -0.56
PTPN13-203ENST00000427191 CGB3P0DN86 165 aa11.58□□□□□ -0.56
PTPN13-203ENST00000427191 C8orf49Q96NF6 230 aa11.58□□□□□ -0.56
PTPN13-203ENST00000427191 IGKV1-16P04430 117 aa11.57□□□□□ -0.56
PTPN13-203ENST00000427191 TMEM213A2RRL7 107 aa11.57□□□□□ -0.56
PTPN13-203ENST00000427191 K7EM74 188 aa11.57□□□□□ -0.56
PTPN13-203ENST00000427191 C11orf52Q96A22 123 aa11.57□□□□□ -0.56
PTPN13-203ENST00000427191 MRPL35Q9NZE8 188 aaKnown RBP11.57□□□□□ -0.56
PTPN13-203ENST00000427191 A0A0G2JNJ9 132 aa11.57□□□□□ -0.56
PTPN13-203ENST00000427191 Q9UFV3 132 aa11.57□□□□□ -0.56
PTPN13-203ENST00000427191 SPINK13Q1W4C9 94 aa11.57□□□□□ -0.56
PTPN13-203ENST00000427191 NBASA2RRP1 2371 aa11.57□□□□□ -0.56
PTPN13-203ENST00000427191 FOXI2Q6ZQN5 318 aa11.57□□□□□ -0.56
PTPN13-203ENST00000427191 TNCP24821 2201 aa11.56□□□□□ -0.56
PTPN13-203ENST00000427191 MDS2Q8NDY4 140 aa11.56□□□□□ -0.56
PTPN13-203ENST00000427191 CFC1BP0CG36 223 aa11.56□□□□□ -0.56
PTPN13-203ENST00000427191 CFC1P0CG37 223 aa11.56□□□□□ -0.56
PTPN13-203ENST00000427191 ADCYAP1P18509 176 aa11.56□□□□□ -0.56
PTPN13-203ENST00000427191 PDE6GP18545 87 aa11.56□□□□□ -0.56
PTPN13-203ENST00000427191 BAALC-AS2P0C853 105 aa11.56□□□□□ -0.56
PTPN13-203ENST00000427191 PRSS57Q6UWY2 283 aa11.56□□□□□ -0.56
PTPN13-203ENST00000427191 Q6ZWC4 215 aa11.56□□□□□ -0.56
PTPN13-203ENST00000427191 ZNRF2Q8NHG8 242 aa11.56□□□□□ -0.56
PTPN13-203ENST00000427191 CGB7P0DN87 165 aa11.55□□□□□ -0.56
PTPN13-203ENST00000427191 H3BMG7 143 aa11.55□□□□□ -0.56
PTPN13-203ENST00000427191 UBE2BP63146 152 aa11.55□□□□□ -0.56
PTPN13-203ENST00000427191 TRAV12-1A0A0B4J245 112 aa11.55□□□□□ -0.56
PTPN13-203ENST00000427191 ATP6V0E1O15342 81 aa11.55□□□□□ -0.56
PTPN13-203ENST00000427191 C12orf74Q32Q52 190 aa11.55□□□□□ -0.56
PTPN13-203ENST00000427191 ZMAT4Q9H898 229 aa11.55□□□□□ -0.56
PTPN13-203ENST00000427191 PLCE1Q9P212 2302 aa11.55□□□□□ -0.56
PTPN13-203ENST00000427191 TFF1P04155 84 aa11.55□□□□□ -0.56
PTPN13-203ENST00000427191 SEC61GP60059 68 aa11.55□□□□□ -0.56
PTPN13-203ENST00000427191 IGHV1-69P01742 117 aa11.55□□□□□ -0.56
PTPN13-203ENST00000427191 C8orf31Q8N9H6 132 aa11.55□□□□□ -0.56
PTPN13-203ENST00000427191 MED13Q9UHV7 2174 aa11.55□□□□□ -0.56
PTPN13-203ENST00000427191 PINLYPA6NC86 204 aa11.55□□□□□ -0.56
PTPN13-203ENST00000427191 ANGP03950 147 aaKnown RBP11.55□□□□□ -0.56
PTPN13-203ENST00000427191 XCL2Q9UBD3 114 aa11.54□□□□□ -0.56
PTPN13-203ENST00000427191 A0A0B4J2C4 111 aa11.54□□□□□ -0.56
PTPN13-203ENST00000427191 BRD3OSQ6XYD6 125 aa11.54□□□□□ -0.56
PTPN13-203ENST00000427191 C1orf43Q9BWL3 253 aa11.54□□□□□ -0.56
PTPN13-203ENST00000427191 ARHGAP21Q5T5U3 1957 aa11.54□□□□□ -0.56
PTPN13-203ENST00000427191 KIF26AQ9ULI4 1882 aaPredicted RBP11.54□□□□□ -0.56
PTPN13-203ENST00000427191 A0A1B0GX51 115 aa11.54□□□□□ -0.56
PTPN13-203ENST00000427191 JMJD7-PLA2G4BH0Y9G9 81 aa11.54□□□□□ -0.56
PTPN13-203ENST00000427191 MST1P26927 711 aa11.54□□□□□ -0.56
PTPN13-203ENST00000427191 C5orf47Q569G3 176 aa11.54□□□□□ -0.56
PTPN13-203ENST00000427191 LTAP01374 205 aa11.54□□□□□ -0.56
PTPN13-203ENST00000427191 IGLL1P15814 213 aa11.54□□□□□ -0.56
PTPN13-203ENST00000427191 MESP1Q9BRJ9 268 aa11.54□□□□□ -0.56
PTPN13-203ENST00000427191 IGHV2-70DA0A0C4DH43 119 aa11.53□□□□□ -0.56
PTPN13-203ENST00000427191 DAZ2Q13117 558 aaKnown RBP11.53□□□□□ -0.56
PTPN13-203ENST00000427191 DAZ4Q86SG3 579 aaKnown RBP11.53□□□□□ -0.56
PTPN13-203ENST00000427191 DAZ3Q9NR90 486 aaKnown RBP11.53□□□□□ -0.56
PTPN13-203ENST00000427191 A0A087WV48 116 aa11.53□□□□□ -0.56
PTPN13-203ENST00000427191 CRYGCP07315 174 aa11.53□□□□□ -0.56
PTPN13-203ENST00000427191 IGHV2-5P01817 119 aa11.52□□□□□ -0.56
PTPN13-203ENST00000427191 ELANEP08246 267 aa11.52□□□□□ -0.56
PTPN13-203ENST00000427191 NUP210Q8TEM1 1887 aaPredicted RBP11.52□□□□□ -0.57
PTPN13-203ENST00000427191 LINC00479Q96M42 142 aa11.52□□□□□ -0.57
PTPN13-203ENST00000427191 IGHV7-4-1A0A0J9YVY3 117 aa11.52□□□□□ -0.57
PTPN13-203ENST00000427191 EFNA2O43921 213 aa11.52□□□□□ -0.57
PTPN13-203ENST00000427191 ETDCA0A1B0GVM5 59 aa11.52□□□□□ -0.57
PTPN13-203ENST00000427191 WFDC9Q8NEX5 89 aa11.51□□□□□ -0.57
PTPN13-203ENST00000427191 NDUFS7O75251 213 aa11.51□□□□□ -0.57
PTPN13-203ENST00000427191 CXCL5P42830 114 aa11.51□□□□□ -0.57
PTPN13-203ENST00000427191 OPRPNQ99935 248 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms