RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 FAM19A4Q96LR4 140 aa8.99□□□□□ -0.97
GPC1-204ENST00000426280 ZNF492Q9P255 531 aa8.99□□□□□ -0.97
GPC1-204ENST00000426280 TRAV12-3A0A0B4J271 114 aa8.98□□□□□ -0.97
GPC1-204ENST00000426280 PAGE4O60829 102 aa8.98□□□□□ -0.97
GPC1-204ENST00000426280 TSPOP30536 169 aa8.98□□□□□ -0.97
GPC1-204ENST00000426280 ATP5G3P48201 142 aa8.98□□□□□ -0.97
GPC1-204ENST00000426280 TAS2R60P59551 318 aa8.98□□□□□ -0.97
GPC1-204ENST00000426280 DAD1P61803 113 aa8.98□□□□□ -0.97
GPC1-204ENST00000426280 TMEM78Q5T7P6 136 aa8.98□□□□□ -0.97
GPC1-204ENST00000426280 PRR9Q5T870 116 aa8.98□□□□□ -0.97
GPC1-204ENST00000426280 C5orf17Q8NAS9 161 aa8.98□□□□□ -0.97
GPC1-204ENST00000426280 RNASE8Q8TDE3 154 aaKnown RBP8.98□□□□□ -0.97
GPC1-204ENST00000426280 ODF3Q96PU9 254 aa8.98□□□□□ -0.97
GPC1-204ENST00000426280 EPDR1Q9UM22 224 aa8.98□□□□□ -0.97
GPC1-204ENST00000426280 RBAKDNA6NC62 111 aa8.97□□□□□ -0.97
GPC1-204ENST00000426280 IFNA7P01567 189 aa8.97□□□□□ -0.97
GPC1-204ENST00000426280 TCRAP04437 139 aa8.97□□□□□ -0.97
GPC1-204ENST00000426280 LEPP41159 167 aa8.97□□□□□ -0.97
GPC1-204ENST00000426280 ZNF138P52744 262 aa8.97□□□□□ -0.97
GPC1-204ENST00000426280 BTN1A1Q13410 526 aa8.97□□□□□ -0.97
GPC1-204ENST00000426280 CST9LP1Q5W188 147 aa8.97□□□□□ -0.97
GPC1-204ENST00000426280 TMEM88Q6PEY1 159 aa8.97□□□□□ -0.97
GPC1-204ENST00000426280 ZFAND2AQ8N6M9 145 aa8.97□□□□□ -0.97
GPC1-204ENST00000426280 NDUFAF3Q9BU61 184 aa8.97□□□□□ -0.97
GPC1-204ENST00000426280 ZNF324O75467 553 aaPredicted RBP8.96□□□□□ -0.98
GPC1-204ENST00000426280 CRISP2P16562 243 aa8.96□□□□□ -0.98
GPC1-204ENST00000426280 ARL6IP6Q8N6S5 226 aa8.96□□□□□ -0.98
GPC1-204ENST00000426280 TVP23CQ96ET8 276 aa8.96□□□□□ -0.98
GPC1-204ENST00000426280 LINC00479Q96M42 142 aa8.96□□□□□ -0.98
GPC1-204ENST00000426280 NOP10Q9NPE3 64 aaKnown RBP8.96□□□□□ -0.98
GPC1-204ENST00000426280 DNAH6Q9C0G6 4158 aa8.96□□□□□ -0.98
GPC1-204ENST00000426280 TRAV1-1A0A0B4J248 108 aa8.95□□□□□ -0.98
GPC1-204ENST00000426280 TRAV34A0A0B4J273 112 aa8.95□□□□□ -0.98
GPC1-204ENST00000426280 C7orf71A4D174 169 aa8.95□□□□□ -0.98
GPC1-204ENST00000426280 LYRM9A8MSI8 78 aa8.95□□□□□ -0.98
GPC1-204ENST00000426280 KLLNB2CW77 178 aa8.95□□□□□ -0.98
GPC1-204ENST00000426280 H7BYZ3 331 aa8.95□□□□□ -0.98
GPC1-204ENST00000426280 RNASE4P34096 147 aaKnown RBP8.95□□□□□ -0.98
GPC1-204ENST00000426280 CCDC28AQ8IWP9 274 aa8.95□□□□□ -0.98
GPC1-204ENST00000426280 TMEM256Q8N2U0 113 aa8.95□□□□□ -0.98
GPC1-204ENST00000426280 POM121L12Q8N7R1 296 aa8.95□□□□□ -0.98
GPC1-204ENST00000426280 CYB561D1Q8N8Q1 229 aa8.95□□□□□ -0.98
GPC1-204ENST00000426280 GNG13Q9P2W3 67 aa8.95□□□□□ -0.98
GPC1-204ENST00000426280 FRAS1Q86XX4 4008 aa8.95□□□□□ -0.98
GPC1-204ENST00000426280 M0R2N4 97 aa8.94□□□□□ -0.98
GPC1-204ENST00000426280 PEX7O00628 323 aa8.94□□□□□ -0.98
GPC1-204ENST00000426280 IGLV2-11P01706 119 aa8.94□□□□□ -0.98
GPC1-204ENST00000426280 GPX1P07203 203 aa8.94□□□□□ -0.98
GPC1-204ENST00000426280 PRNTQ86SH4 94 aa8.94□□□□□ -0.98
GPC1-204ENST00000426280 LINC00612Q8N6U2 182 aa8.94□□□□□ -0.98
GPC1-204ENST00000426280 PCNPQ8WW12 178 aaKnown RBP8.94□□□□□ -0.98
GPC1-204ENST00000426280 C16orf74Q96GX8 76 aa8.94□□□□□ -0.98
GPC1-204ENST00000426280 ATG101Q9BSB4 218 aa8.94□□□□□ -0.98
GPC1-204ENST00000426280 TP53TG3Q9ULZ0 132 aa8.94□□□□□ -0.98
GPC1-204ENST00000426280 PSG8Q9UQ74 426 aa8.94□□□□□ -0.98
GPC1-204ENST00000426280 TEX48A0A1B0GUV7 120 aa8.93□□□□□ -0.98
GPC1-204ENST00000426280 CBY3A6NI87 242 aa8.93□□□□□ -0.98
GPC1-204ENST00000426280 F6UZH7 168 aa8.93□□□□□ -0.98
GPC1-204ENST00000426280 FLI1Q01543 452 aaPredicted RBP8.93□□□□□ -0.98
GPC1-204ENST00000426280 TMEM263Q8WUH6 116 aaKnown RBP8.93□□□□□ -0.98
GPC1-204ENST00000426280 C8orf49Q96NF6 230 aa8.93□□□□□ -0.98
GPC1-204ENST00000426280 C20orf144Q9BQM9 153 aa8.93□□□□□ -0.98
GPC1-204ENST00000426280 NKX6-2Q9C056 277 aaPredicted RBP8.93□□□□□ -0.98
GPC1-204ENST00000426280 TIMM8BQ9Y5J9 83 aaPredicted RBP8.93□□□□□ -0.98
GPC1-204ENST00000426280 ARL2-SNX15V9GYD0 113 aa8.93□□□□□ -0.98
GPC1-204ENST00000426280 SERTM2A0A1B0GWG4 89 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 SCO2A0A1W2PP80 73 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 GAGE12BA1L429 117 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 F5H768 121 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 TEX46H3BTG2 121 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 K7EQM0 130 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 GAGE7O76087 117 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 GAGE12FP0CL80 117 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 GAGE12GP0CL81 117 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 GAGE12IP0CL82 117 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 HOXA5P20719 270 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 PPT1P50897 306 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 ZNF493Q6ZR52 646 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 TMEM75Q8N9X5 138 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 C11orf72Q8NBR9 251 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 TREM1Q9NP99 234 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 MANBALQ9NQG1 85 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 GSN-AS1Q9NRJ2 163 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 KLF12Q9Y4X4 402 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 LENEPQ9Y5L5 61 aa8.92□□□□□ -0.98
GPC1-204ENST00000426280 IGLV2-18A0A075B6J9 118 aa8.91□□□□□ -0.98
GPC1-204ENST00000426280 TRBV7-9A0A0J9YWB2 115 aa8.91□□□□□ -0.98
GPC1-204ENST00000426280 NMBP08949 121 aa8.91□□□□□ -0.98
GPC1-204ENST00000426280 P0DMU3 169 aa8.91□□□□□ -0.98
GPC1-204ENST00000426280 FAM231AP0DMU4 169 aa8.91□□□□□ -0.98
GPC1-204ENST00000426280 FAM231CP0DMU5 169 aa8.91□□□□□ -0.98
GPC1-204ENST00000426280 ZNF80P51504 273 aaPredicted RBP8.91□□□□□ -0.98
GPC1-204ENST00000426280 BLOC1S1P78537 153 aa8.91□□□□□ -0.98
GPC1-204ENST00000426280 TEX261Q6UWH6 196 aa8.91□□□□□ -0.98
GPC1-204ENST00000426280 Q6ZTI0 123 aa8.91□□□□□ -0.98
GPC1-204ENST00000426280 HIST1H2BAQ96A08 127 aa8.91□□□□□ -0.98
GPC1-204ENST00000426280 FAM210BQ96KR6 192 aa8.91□□□□□ -0.98
GPC1-204ENST00000426280 ATP5G1P05496 136 aa8.9□□□□□ -0.98
GPC1-204ENST00000426280 AKR1C3P42330 323 aa8.9□□□□□ -0.98
GPC1-204ENST00000426280 MUC21Q5SSG8 566 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms