RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 CD28P10747 220 aa10.86□□□□□ -0.67
CDK3-201ENST00000425876 HIST1H1AQ02539 215 aaPredicted RBP10.86□□□□□ -0.67
CDK3-201ENST00000425876 FHL3Q13643 280 aa10.86□□□□□ -0.67
CDK3-201ENST00000425876 ADAMTSL5Q6ZMM2 481 aa10.86□□□□□ -0.67
CDK3-201ENST00000425876 OR8A1Q8NGG7 326 aa10.86□□□□□ -0.67
CDK3-201ENST00000425876 OR9G4Q8NGQ1 327 aa10.86□□□□□ -0.67
CDK3-201ENST00000425876 IGKV3-7A0A075B6H7 116 aa10.85□□□□□ -0.67
CDK3-201ENST00000425876 K7EQG2 157 aa10.85□□□□□ -0.67
CDK3-201ENST00000425876 TRAV2A0A0B4J234 112 aa10.84□□□□□ -0.67
CDK3-201ENST00000425876 TCF21O43680 179 aa10.84□□□□□ -0.67
CDK3-201ENST00000425876 PROK1P58294 105 aa10.84□□□□□ -0.67
CDK3-201ENST00000425876 SNRPD3P62318 126 aaKnown RBP10.84□□□□□ -0.67
CDK3-201ENST00000425876 PAFAH1B2P68402 229 aa10.84□□□□□ -0.67
CDK3-201ENST00000425876 HBBP68871 147 aa10.84□□□□□ -0.67
CDK3-201ENST00000425876 DLX4Q92988 240 aaPredicted RBP10.84□□□□□ -0.67
CDK3-201ENST00000425876 PGLYRP4Q96LB8 373 aa10.84□□□□□ -0.67
CDK3-201ENST00000425876 RNF114Q9Y508 228 aa10.84□□□□□ -0.67
CDK3-201ENST00000425876 A0A1B0GW15 77 aa10.83□□□□□ -0.68
CDK3-201ENST00000425876 HAX1O00165 279 aa10.83□□□□□ -0.68
CDK3-201ENST00000425876 CRLF1O75462 422 aa10.83□□□□□ -0.68
CDK3-201ENST00000425876 GZMBP10144 247 aa10.83□□□□□ -0.68
CDK3-201ENST00000425876 LINC01559Q495D7 138 aa10.83□□□□□ -0.68
CDK3-201ENST00000425876 RAX2Q96IS3 184 aa10.83□□□□□ -0.68
CDK3-201ENST00000425876 FAM19A4Q96LR4 140 aa10.83□□□□□ -0.68
CDK3-201ENST00000425876 CITED2Q99967 270 aaPredicted RBP10.83□□□□□ -0.68
CDK3-201ENST00000425876 A0A1B0GUT8 65 aa10.82□□□□□ -0.68
CDK3-201ENST00000425876 CCL24O00175 119 aa10.82□□□□□ -0.68
CDK3-201ENST00000425876 CSN3P07498 182 aa10.82□□□□□ -0.68
CDK3-201ENST00000425876 RAB4BP61018 213 aa10.82□□□□□ -0.68
CDK3-201ENST00000425876 WFDC3Q8IUB2 231 aa10.82□□□□□ -0.68
CDK3-201ENST00000425876 APRG1Q8IVJ8 170 aa10.82□□□□□ -0.68
CDK3-201ENST00000425876 APCSP02743 223 aa10.82□□□□□ -0.68
CDK3-201ENST00000425876 S100A8P05109 93 aa10.82□□□□□ -0.68
CDK3-201ENST00000425876 ZNF705DP0CH99 300 aaPredicted RBP10.82□□□□□ -0.68
CDK3-201ENST00000425876 ZNF705BP0CI00 300 aaPredicted RBP10.82□□□□□ -0.68
CDK3-201ENST00000425876 CRISP2P16562 243 aa10.82□□□□□ -0.68
CDK3-201ENST00000425876 RIGQ13278 110 aa10.82□□□□□ -0.68
CDK3-201ENST00000425876 ZFAND2AQ8N6M9 145 aa10.82□□□□□ -0.68
CDK3-201ENST00000425876 DUX3Q96PT4 197 aa10.82□□□□□ -0.68
CDK3-201ENST00000425876 ORM1P02763 201 aa10.81□□□□□ -0.68
CDK3-201ENST00000425876 GDF5OSQ5U4N7 250 aa10.81□□□□□ -0.68
CDK3-201ENST00000425876 GATD1Q8NB37 220 aa10.81□□□□□ -0.68
CDK3-201ENST00000425876 ODF3Q96PU9 254 aa10.81□□□□□ -0.68
CDK3-201ENST00000425876 SIGLEC8Q9NYZ4 499 aa10.81□□□□□ -0.68
CDK3-201ENST00000425876 SELENOKQ9Y6D0 94 aa10.81□□□□□ -0.68
CDK3-201ENST00000425876 ZNF688P0C7X2 276 aa10.8□□□□□ -0.68
CDK3-201ENST00000425876 IGLC6P0CF74 106 aa10.8□□□□□ -0.68
CDK3-201ENST00000425876 CTRLP40313 264 aa10.8□□□□□ -0.68
CDK3-201ENST00000425876 CAMPP49913 170 aa10.8□□□□□ -0.68
CDK3-201ENST00000425876 ZNF575Q86XF7 245 aa10.8□□□□□ -0.68
CDK3-201ENST00000425876 HIST3H2BBQ8N257 126 aa10.8□□□□□ -0.68
CDK3-201ENST00000425876 C11orf44Q8N8P7 122 aa10.8□□□□□ -0.68
CDK3-201ENST00000425876 BORCS7Q96B45 105 aa10.8□□□□□ -0.68
CDK3-201ENST00000425876 A0A1B0GUS0 222 aa10.79□□□□□ -0.68
CDK3-201ENST00000425876 F6UB75 175 aa10.79□□□□□ -0.68
CDK3-201ENST00000425876 TFPI2P48307 235 aa10.79□□□□□ -0.68
CDK3-201ENST00000425876 Q0VG73 95 aa10.79□□□□□ -0.68
CDK3-201ENST00000425876 PSMG4Q5JS54 123 aa10.79□□□□□ -0.68
CDK3-201ENST00000425876 TMSB15BA0A087X1C1 80 aa10.78□□□□□ -0.68
CDK3-201ENST00000425876 TRAV25A0A0B4J276 109 aa10.78□□□□□ -0.68
CDK3-201ENST00000425876 TRAV21A0A0B4J279 112 aa10.78□□□□□ -0.68
CDK3-201ENST00000425876 A0A0J9YX75 114 aa10.78□□□□□ -0.68
CDK3-201ENST00000425876 A0A1W2PRX2 142 aa10.78□□□□□ -0.68
CDK3-201ENST00000425876 ARMS2P0C7Q2 107 aa10.78□□□□□ -0.68
CDK3-201ENST00000425876 AKR1D1P51857 326 aa10.78□□□□□ -0.68
CDK3-201ENST00000425876 DEFB1P60022 68 aa10.78□□□□□ -0.68
CDK3-201ENST00000425876 SLAQ13239 276 aa10.78□□□□□ -0.68
CDK3-201ENST00000425876 DEFB114Q30KQ6 69 aa10.78□□□□□ -0.68
CDK3-201ENST00000425876 LYZL1Q6UWQ5 148 aa10.78□□□□□ -0.68
CDK3-201ENST00000425876 FER1L6-AS1Q8NA97 138 aa10.78□□□□□ -0.68
CDK3-201ENST00000425876 DYNLRB2Q8TF09 96 aa10.78□□□□□ -0.68
CDK3-201ENST00000425876 CNFNQ9BYD5 112 aa10.78□□□□□ -0.68
CDK3-201ENST00000425876 C11orf21Q9P2W6 132 aa10.78□□□□□ -0.68
CDK3-201ENST00000425876 IGKV3D-20A0A0C4DH25 116 aa10.77□□□□□ -0.68
CDK3-201ENST00000425876 F2Z2F3 143 aa10.77□□□□□ -0.68
CDK3-201ENST00000425876 DUSP14O95147 198 aaKnown RBP10.77□□□□□ -0.68
CDK3-201ENST00000425876 OR10J3Q5JRS4 329 aa10.77□□□□□ -0.68
CDK3-201ENST00000425876 PRR9Q5T870 116 aa10.77□□□□□ -0.68
CDK3-201ENST00000425876 GFI1BQ5VTD9 330 aa10.77□□□□□ -0.68
CDK3-201ENST00000425876 EBLN2Q6P2I7 272 aa10.77□□□□□ -0.68
CDK3-201ENST00000425876 FOXI2Q6ZQN5 318 aa10.77□□□□□ -0.68
CDK3-201ENST00000425876 PRIMA1Q86XR5 153 aa10.77□□□□□ -0.68
CDK3-201ENST00000425876 IFITM10A6NMD0 228 aa10.77□□□□□ -0.69
CDK3-201ENST00000425876 ADARB2-AS1A8MUL3 147 aa10.77□□□□□ -0.69
CDK3-201ENST00000425876 KLLNB2CW77 178 aa10.77□□□□□ -0.69
CDK3-201ENST00000425876 GPX1P07203 203 aa10.77□□□□□ -0.69
CDK3-201ENST00000425876 HIST2H2BDQ6DRA6 164 aa10.77□□□□□ -0.69
CDK3-201ENST00000425876 ZNF493Q6ZR52 646 aa10.77□□□□□ -0.69
CDK3-201ENST00000425876 TMEM61Q8N0U2 210 aa10.77□□□□□ -0.69
CDK3-201ENST00000425876 KIAA1644Q3SXP7 199 aa10.76□□□□□ -0.69
CDK3-201ENST00000425876 SPAG8Q99932 426 aaPredicted RBP10.76□□□□□ -0.69
CDK3-201ENST00000425876 DNHD1Q96M86 4753 aa10.75□□□□□ -0.69
CDK3-201ENST00000425876 GRIFINA4D1Z8 144 aa10.75□□□□□ -0.69
CDK3-201ENST00000425876 ESDP10768 282 aa10.75□□□□□ -0.69
CDK3-201ENST00000425876 S100A2P29034 98 aa10.75□□□□□ -0.69
CDK3-201ENST00000425876 SRIP30626 198 aa10.75□□□□□ -0.69
CDK3-201ENST00000425876 LEPP41159 167 aa10.75□□□□□ -0.69
CDK3-201ENST00000425876 NDUFA11Q86Y39 141 aa10.75□□□□□ -0.69
CDK3-201ENST00000425876 TPPP3Q9BW30 176 aa10.75□□□□□ -0.69
CDK3-201ENST00000425876 SSBP4Q9BWG4 385 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms