RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 A0A1B0GUT8 65 aa19.96■□□□□ 0.79
LDB1-202ENST00000425280 ADAMTSL5Q6ZMM2 481 aa19.96■□□□□ 0.79
LDB1-202ENST00000425280 ZNF575Q86XF7 245 aa19.96■□□□□ 0.79
LDB1-202ENST00000425280 LENEPQ9Y5L5 61 aa19.96■□□□□ 0.79
LDB1-202ENST00000425280 F6UB75 175 aa19.95■□□□□ 0.78
LDB1-202ENST00000425280 ARMS2P0C7Q2 107 aa19.95■□□□□ 0.78
LDB1-202ENST00000425280 RPS20P60866 119 aaKnown RBP19.95■□□□□ 0.78
LDB1-202ENST00000425280 OR8A1Q8NGG7 326 aa19.95■□□□□ 0.78
LDB1-202ENST00000425280 LINC01006Q8NI28 216 aa19.95■□□□□ 0.78
LDB1-202ENST00000425280 TP53TG3Q9ULZ0 132 aa19.95■□□□□ 0.78
LDB1-202ENST00000425280 OTOGQ6ZRI0 2925 aa19.95■□□□□ 0.78
LDB1-202ENST00000425280 TMEM256Q8N2U0 113 aa19.95■□□□□ 0.78
LDB1-202ENST00000425280 HIST1H2BLQ99880 126 aa19.95■□□□□ 0.78
LDB1-202ENST00000425280 ORM1P02763 201 aa19.94■□□□□ 0.78
LDB1-202ENST00000425280 FABP4P15090 132 aa19.94■□□□□ 0.78
LDB1-202ENST00000425280 HIST1H1AQ02539 215 aaPredicted RBP19.94■□□□□ 0.78
LDB1-202ENST00000425280 WFDC12Q8WWY7 111 aa19.94■□□□□ 0.78
LDB1-202ENST00000425280 TPPP3Q9BW30 176 aa19.94■□□□□ 0.78
LDB1-202ENST00000425280 HIVEP2P31629 2446 aa19.93■□□□□ 0.78
LDB1-202ENST00000425280 TFPI2P48307 235 aa19.93■□□□□ 0.78
LDB1-202ENST00000425280 LINC01559Q495D7 138 aa19.93■□□□□ 0.78
LDB1-202ENST00000425280 PRR31Q5SQ13 230 aa19.93■□□□□ 0.78
LDB1-202ENST00000425280 CD28P10747 220 aa19.93■□□□□ 0.78
LDB1-202ENST00000425280 SRIP30626 198 aa19.93■□□□□ 0.78
LDB1-202ENST00000425280 Q0VG73 95 aa19.93■□□□□ 0.78
LDB1-202ENST00000425280 LYZL1Q6UWQ5 148 aa19.93■□□□□ 0.78
LDB1-202ENST00000425280 C11orf44Q8N8P7 122 aa19.93■□□□□ 0.78
LDB1-202ENST00000425280 NF1P21359 2839 aa19.93■□□□□ 0.78
LDB1-202ENST00000425280 M0QZ24 198 aa19.92■□□□□ 0.78
LDB1-202ENST00000425280 RIGQ13278 110 aa19.92■□□□□ 0.78
LDB1-202ENST00000425280 K7EQG2 157 aa19.91■□□□□ 0.78
LDB1-202ENST00000425280 PRR9Q5T870 116 aa19.91■□□□□ 0.78
LDB1-202ENST00000425280 OR10D4PQ8NGN7 298 aa19.91■□□□□ 0.78
LDB1-202ENST00000425280 C11orf21Q9P2W6 132 aa19.91■□□□□ 0.78
LDB1-202ENST00000425280 NUPR1O60356 82 aa19.91■□□□□ 0.78
LDB1-202ENST00000425280 AMBPP02760 352 aa19.91■□□□□ 0.78
LDB1-202ENST00000425280 DLX4Q92988 240 aaPredicted RBP19.91■□□□□ 0.78
LDB1-202ENST00000425280 F2Z2F3 143 aa19.9■□□□□ 0.78
LDB1-202ENST00000425280 ZFAND2AQ8N6M9 145 aa19.9■□□□□ 0.78
LDB1-202ENST00000425280 OR9G4Q8NGQ1 327 aa19.9■□□□□ 0.78
LDB1-202ENST00000425280 FAM19A4Q96LR4 140 aa19.9■□□□□ 0.78
LDB1-202ENST00000425280 C12orf57Q99622 126 aa19.9■□□□□ 0.78
LDB1-202ENST00000425280 IGLC6P0CF74 106 aa19.9■□□□□ 0.78
LDB1-202ENST00000425280 LINC00310P59036 64 aa19.9■□□□□ 0.78
LDB1-202ENST00000425280 PEMTQ9UBM1 199 aa19.9■□□□□ 0.78
LDB1-202ENST00000425280 ZNF688P0C7X2 276 aa19.89■□□□□ 0.77
LDB1-202ENST00000425280 Q6ZQT7 251 aa19.89■□□□□ 0.77
LDB1-202ENST00000425280 BORCS7Q96B45 105 aa19.89■□□□□ 0.77
LDB1-202ENST00000425280 IGKV3D-20A0A0C4DH25 116 aa19.88■□□□□ 0.77
LDB1-202ENST00000425280 A0A1B0GW15 77 aa19.88■□□□□ 0.77
LDB1-202ENST00000425280 SMIM6P0DI80 62 aa19.88■□□□□ 0.77
LDB1-202ENST00000425280 CTRLP40313 264 aa19.88■□□□□ 0.77
LDB1-202ENST00000425280 OR10J3Q5JRS4 329 aa19.88■□□□□ 0.77
LDB1-202ENST00000425280 BAGE3Q86Y29 109 aa19.88■□□□□ 0.77
LDB1-202ENST00000425280 FER1L6-AS1Q8NA97 138 aa19.88■□□□□ 0.77
LDB1-202ENST00000425280 GATD1Q8NB37 220 aa19.88■□□□□ 0.77
LDB1-202ENST00000425280 RAX2Q96IS3 184 aa19.88■□□□□ 0.77
LDB1-202ENST00000425280 PACRGQ96M98 296 aaPredicted RBP19.88■□□□□ 0.77
LDB1-202ENST00000425280 A0A1W2PRX2 142 aa19.87■□□□□ 0.77
LDB1-202ENST00000425280 PSMG4Q5JS54 123 aa19.87■□□□□ 0.77
LDB1-202ENST00000425280 JMJD8Q96S16 334 aa19.87■□□□□ 0.77
LDB1-202ENST00000425280 SERF1AO75920 110 aa19.87■□□□□ 0.77
LDB1-202ENST00000425280 SNRPD3P62318 126 aaKnown RBP19.87■□□□□ 0.77
LDB1-202ENST00000425280 CITED2Q99967 270 aaPredicted RBP19.87■□□□□ 0.77
LDB1-202ENST00000425280 ALKBH7Q9BT30 221 aaPredicted RBP19.87■□□□□ 0.77
LDB1-202ENST00000425280 J3KRW8 73 aa19.86■□□□□ 0.77
LDB1-202ENST00000425280 NDUFA7O95182 113 aa19.86■□□□□ 0.77
LDB1-202ENST00000425280 TRBV7-9A0A0J9YWB2 115 aa19.85■□□□□ 0.77
LDB1-202ENST00000425280 CSN3P07498 182 aa19.85■□□□□ 0.77
LDB1-202ENST00000425280 MUC21A0A0G2JKD1 596 aa19.85■□□□□ 0.77
LDB1-202ENST00000425280 MUC21A0A140T8X8 626 aa19.85■□□□□ 0.77
LDB1-202ENST00000425280 MUC21Q5SSG8 566 aa19.85■□□□□ 0.77
LDB1-202ENST00000425280 INAFM1C9JVW0 142 aa19.84■□□□□ 0.77
LDB1-202ENST00000425280 ESDP10768 282 aa19.84■□□□□ 0.77
LDB1-202ENST00000425280 FHL3Q13643 280 aa19.84■□□□□ 0.77
LDB1-202ENST00000425280 APRG1Q8IVJ8 170 aa19.84■□□□□ 0.77
LDB1-202ENST00000425280 C18orf32Q8TCD1 76 aa19.84■□□□□ 0.77
LDB1-202ENST00000425280 TMEM18Q96B42 140 aa19.84■□□□□ 0.77
LDB1-202ENST00000425280 TSSC4Q9Y5U2 329 aaPredicted RBP19.84■□□□□ 0.77
LDB1-202ENST00000425280 SSTP61278 116 aa19.83■□□□□ 0.77
LDB1-202ENST00000425280 LOC102724200A0A096LPH7 203 aaPredicted RBP19.83■□□□□ 0.76
LDB1-202ENST00000425280 PAFAH1B2P68402 229 aa19.83■□□□□ 0.76
LDB1-202ENST00000425280 GPX1P07203 203 aa19.82■□□□□ 0.76
LDB1-202ENST00000425280 CD33P20138 364 aa19.82■□□□□ 0.76
LDB1-202ENST00000425280 RCHY1Q96PM5 261 aa19.82■□□□□ 0.76
LDB1-202ENST00000425280 CCL24O00175 119 aa19.82■□□□□ 0.76
LDB1-202ENST00000425280 IQCJQ1A5X6 159 aa19.82■□□□□ 0.76
LDB1-202ENST00000425280 ZNF493Q6ZR52 646 aa19.82■□□□□ 0.76
LDB1-202ENST00000425280 RNF114Q9Y508 228 aa19.82■□□□□ 0.76
LDB1-202ENST00000425280 A0A0J9YX75 114 aa19.81■□□□□ 0.76
LDB1-202ENST00000425280 KIR3DS1Q14943 382 aa19.81■□□□□ 0.76
LDB1-202ENST00000425280 PYY3Q5JQD4 70 aa19.81■□□□□ 0.76
LDB1-202ENST00000425280 TRAV21A0A0B4J279 112 aa19.8■□□□□ 0.76
LDB1-202ENST00000425280 RNASE4P34096 147 aaKnown RBP19.8■□□□□ 0.76
LDB1-202ENST00000425280 CNFNQ9BYD5 112 aa19.8■□□□□ 0.76
LDB1-202ENST00000425280 FOSL1P15407 271 aa19.79■□□□□ 0.76
LDB1-202ENST00000425280 NTF3P20783 257 aa19.79■□□□□ 0.76
LDB1-202ENST00000425280 PROK1P58294 105 aa19.79■□□□□ 0.76
LDB1-202ENST00000425280 TMEM61Q8N0U2 210 aa19.79■□□□□ 0.76
LDB1-202ENST00000425280 KLLNB2CW77 178 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms