RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 TMEM167BQ9NRX6 74 aa2.78□□□□□ -1.97
TOP2A-201ENST00000423485 MGAM2Q2M2H8 2515 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 IGSF23A1L1A6 192 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 FOXI3A8MTJ6 420 aaPredicted RBP2.77□□□□□ -1.97
TOP2A-201ENST00000423485 M0R036 132 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 TSPAN13O95857 204 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 PSG5Q15238 335 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 MAJINQ3KP22 176 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 C11orf87Q6NUJ2 197 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 TMEM88Q6PEY1 159 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 ZNF562Q6V9R5 426 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 BAP18Q8IXM2 172 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 C8orf49Q96NF6 230 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 JPT2Q9H910 190 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 NOP10Q9NPE3 64 aaKnown RBP2.77□□□□□ -1.97
TOP2A-201ENST00000423485 IGHV4OR15-8A0A075B7B6 117 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 A0A087WW49 117 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 LCE6AA0A183 80 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 C7orf71A4D174 169 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 A6NDX4 124 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 IFITM5A6NNB3 132 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 CDS2O95674 445 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 NBEAP1P0C6P0 100 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 TNFRSF1BP20333 461 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 HRH1P35367 487 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 C9orf153Q5TBE3 101 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 ZNF837Q96EG3 531 aaPredicted RBP2.77□□□□□ -1.97
TOP2A-201ENST00000423485 ADAT3Q96EY9 351 aaPredicted RBP2.77□□□□□ -1.97
TOP2A-201ENST00000423485 PGLYRP3Q96LB9 341 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 PRELID3AQ96N28 172 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 TP53TG1Q9Y2A0 90 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 OR2W1Q9Y3N9 320 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 LPAP08519 4548 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 IGLV1-36A0A0B4J1U3 117 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 A0A1B0GV72 72 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 KNCNA6PVL3 124 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 M0QXV9 152 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 FHL3Q13643 280 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 ATP6V1FQ16864 119 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 LHFPL4Q7Z7J7 247 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 Q8N1Y9 231 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 OR2T35Q8NGX2 323 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 TMEM204Q9BSN7 226 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 FRRS1LQ9P0K9 344 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 FUT9Q9Y231 359 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 RYR3Q15413 4870 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 HSPE1P61604 102 aaKnown RBP2.77□□□□□ -1.97
TOP2A-201ENST00000423485 LSM3P62310 102 aaKnown RBP2.77□□□□□ -1.97
TOP2A-201ENST00000423485 RPL24P83731 157 aaKnown RBP2.77□□□□□ -1.97
TOP2A-201ENST00000423485 LGALS9CQ6DKI2 356 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 DGAT2L6Q6ZPD8 337 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 ZNF114Q8NC26 417 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 KAAG1Q9UBP8 84 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 ABCA13Q86UQ4 5058 aa2.77□□□□□ -1.97
TOP2A-201ENST00000423485 IGHV3-64A0A075B6Q5 118 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 IGKV2-24A0A0C4DH68 120 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 RBFOX2O43251 390 aaKnown RBP eCLIP2.76□□□□□ -1.97
TOP2A-201ENST00000423485 CRYGBP07316 175 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 PCP4P48539 62 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 KLF5Q13887 457 aaPredicted RBP2.76□□□□□ -1.97
TOP2A-201ENST00000423485 RNF151Q2KHN1 245 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 TMEM255AQ5JRV8 349 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 TMEM91Q6ZNR0 172 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 RTN4IP1Q8WWV3 396 aaPredicted RBP2.76□□□□□ -1.97
TOP2A-201ENST00000423485 C5orf66Q9H5L9 145 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 JKAMPQ9P055 326 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 ARL14EPLP0DKL9 152 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 ERCC8Q13216 396 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 CDPF1Q6NVV7 123 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 ARRDC1Q8N5I2 433 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 IGHV7-4-1A0A0J9YVY3 117 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 GAGE12JA6NER3 117 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 HIST1H3AP68431 136 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 GAGE4Q13068 117 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 GAGE5Q13069 117 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 GAGE13Q4V321 117 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 PUSL1Q8N0Z8 303 aaKnown RBP2.76□□□□□ -1.97
TOP2A-201ENST00000423485 MRGPRFQ96AM1 343 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 SCRT1Q9BWW7 348 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 SPRY4Q9C004 299 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 PKD1P98161 4303 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 A0A087X0M5 115 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 A0A1B0GX30 115 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 A0A1W2PNU3 283 aaPredicted RBP2.76□□□□□ -1.97
TOP2A-201ENST00000423485 HLA-DRB4P13762 266 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 CDC34P49427 236 aaPredicted RBP2.76□□□□□ -1.97
TOP2A-201ENST00000423485 RIGQ13278 110 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 PPP1R1AQ13522 171 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 C6orf226Q5I0X4 101 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 LINC00477Q96M19 166 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 CAMK2N2Q96S95 79 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 PARP12Q9H0J9 701 aaKnown RBP2.76□□□□□ -1.97
TOP2A-201ENST00000423485 HLA-DRB4X5D2U9 266 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 BUB3O43684 328 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 EFNB2P52799 333 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 LMO4P61968 165 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 SSBP2P81877 361 aaPredicted RBP2.76□□□□□ -1.97
TOP2A-201ENST00000423485 RBM45Q8IUH3 476 aaKnown RBP2.76□□□□□ -1.97
TOP2A-201ENST00000423485 HIST3H2BBQ8N257 126 aa2.76□□□□□ -1.97
TOP2A-201ENST00000423485 IGHV3OR16-8A0A075B7F1 116 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms